zgc:153867 (LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989)


Basic Information

Item Value
gene id zgc:153867
gene name LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21737480 ~ 21746717 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801680.1
TACAGGACGTTAGGAATGGCTCCTAAGAGAGAACCCTCCATTAAGAAGTCTCCTTCACCAGTGAACCAACCCAGACTGGGTCCTCCTTACCCCTGCCTCGCTGCGGCACCTGCAGCTCCAAAACCGGCTCCAGAGCAGAAACCTAGGATGCTGCGTCTTTCGGATTCACCATTTGACCCCAGTACTTTGGAGATTGAATTTAACCTGGATCAGATTCATGAGTTTAAGGAGGCATTCCTGCTGTTCGACAGGACAGGAGATGGCAAGATCAGCTTCAGCCAGTGTGGGGATGTCATGCGGGCCCTGGGACAGAACCCTGTCAATGCGGAGGTGCTCAAGGTCCTGGGCAACCCAAAGGCTGAGGAGATGAACAGCAAGATGCTAGACTTTGAGCAGTTCCTGCCCATGTTCCAGGCCATCGCTAAGAATAAAGATCAGGGCTCCATGGAGGATTTTGTGGAGGGACTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTAATGGGAGCAGAGCTTCGTCATGTCCTCACCACGTTAGGTGAGAAAATGACAGAGGAGGAAGTTGAGACGCTCTTGGCAGGACATGAAGACGCAAATGGTTGCATCAATTATGAAGAACTGGTCAGGATGGTCATGAACGGGTGAAGACAAAGAGCATCCAACTTTTTTTACCTTGTCACATGTACCCTTTTTTTGCAGTTAGCTTCTTCAGCCCCTCCCAACCTTTTCCATGGATTAGTTTTccacatttaatttaagaagtGCCTTTTACATTCCCTAATAAATACCACAAATAGCCCTGGCTATTGTTGCCAGGTCTATTAACATATGTGACCAACTTGTATACATTCAGAAGTCTTACTGCTTGCATTGTTTGCAATAACATTCCTGGTGCAGCACTTAAGATGACATCAATTGATaatgatatactgtaaatattcaTACTAGTGTTTCAATGTTGGATGGGacattaacatatatatatatacagtatacataattGTCAGCAACCTACTGTATCATTGGCTAAGACTTGCTTTGACTAAGGAACATGCTCTTGCAGTAAACCGGTATATTCAAAGCCATACTATAATGAGGTAGAAAAGAAACATTTCAAATGGGTTCCCATGTTTTTAATTCACCCCAATTTTGTTGctgcatttaaataaatgttttttcctGAAAACTCA
>XM_039801681.1
TTTTGGGCTGTACAGGACGTTAGGAATGGCTCCTAAGAGAGAACCCTCCATTAAGAAGTCTCCTTCACCAGTGAACCAACCCAGACTGGGTCCTCCTTACCCCTGCCTCGCTGCGGCACCTGCAGCTCCAAAACCGGCTCCAGAGCAGAAACCTAGGATGCTGCGTCTTTCGGATTCACCATTTGACCCCAGTACTTTGGAGATTGAATTTAACCTGGATCAGATTCATGAGTTTAAGGAGGCATTCCTGCTGTTCGACAGGACAGGAGATGGCAAGATCAGCTTCAGCCAGTGTGGGGATGTCATGCGGGCCCTGGGACAGAACCCTGTCAATGCGGAGGTGCTCAAGGTCCTGGGCAACCCAAAGGCTGAGGAGATGAACAGCAAGATGCTAGACTTTGAGCAGTTCCTGCCCATGTTCCAGGCCATCGCTAAGAATAAAGATCAGGGCTCCATGGAGGATTTTGTGGAGGGACTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTAATGGGAGCAGAGCTTCGTCATGTCCTCACCACGTTAGGTGAGAAAATGACAGAGGAGGAAGTTGAGACGCTCTTGGCAGGACATGAAGACGCAAATGGTTGCATCAATTATGAAGCATTTGTCCGCCACATCATGTCAGGCTGAGGGCCGAACTGGTCAGGATGGTCATGAACGGGTGAAGACAAAGAGCATCCAACTTTTTTTACCTTGTCACATGTACCCTTTTTTTGCAGTTAGCTTCTTCAGCCCCTCCCAACCTTTTCCATGGATTAGTTTTccacatttaatttaagaagtGCCTTTTACATTCCCTAATAAATACCACAAATAGCCCTGGCTATTGTTGCCAGGTCTATTAACATATGTGACCAACTTGTATACATTCAGAAGTCTTACTGCTTGCATTGTTTGCAATAACATTCCTGGTGCAGCACTTAAGATGACATCAATTGATaatgatatactgtaaatattcaTACTAGTGTTTCAATGTTGGATGGGacattaacatatatatatatacagtatacataattGTCAGCAACCTACTGTATCATTGGCTAAGACTTGCTTTGACTAAGGAACATGCTCTTGCAGTAAACCGGTATATTCAAAGCCATACTATAATGAGGTAGAAAAGAAACATTTCAAATGGGTTCCCATGTTTTTAATTCACCCCAATTTTGTTGctgcatttaaataaatgttttttcctGAAAACTCA
>XM_039801682.1
AGTTTTGGGCTGTACAGGACGTTAGGAATGGCTCCTAAGAGAGAACCCTCCATTAAGAAGTCTCCTTCACCAGTGAACCAACCCAGACTGGGTCCTCCTTACCCCTGCCTCGCTGCGGCACCTGCAGCTCCAAAACCGGCTCCAGAGCAGAAACCTAGGATGCTGCGTCTTTCGGATTCACCATTTGACCCCAGTACTTTGGAGATTGAATTTAACCTGGATCAGATTCATGAGTTTAAGGAGGCATTCCTGCTGTTCGACAGGACAGGAGATGGCAAGATCAGCTTCAGCCAGTGTGGGGATGTCATGCGGGCCCTGGGACAGAACCCTGTCAATGCGGAGGTGCTCAAGGTCCTGGGCAACCCAAAGGCTGAGGAGATGAACAGCAAGATGCTAGACTTTGAGCAGTTCCTGCCCATGTTCCAGGCCATCGCTAAGAATAAAGATCAGGGCTCCATGGAGGATTTTGTGGAGGGACTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTAATGGGAGCAGAGCTTCGTCATGTCCTCACCACGTTAGGTGAGAAAATGACAGAGGAGGAAGTTGAGACGCTCTTGGCAGGACATGAAGACGCAAATGGTTGCATCAATTATGAAGCATTTGTCCGCCACATCATGTCAGGCTGAGGGCCGGTACGGGCATTTGAACTGGTCAGGATGGTCATGAACGGGTGAAGACAAAGAGCATCCAACTTTTTTTACCTTGTCACATGTACCCTTTTTTTGCAGTTAGCTTCTTCAGCCCCTCCCAACCTTTTCCATGGATTAGTTTTccacatttaatttaagaagtGCCTTTTACATTCCCTAATAAATACCACAAATAGCCCTGGCTATTGTTGCCAGGTCTATTAACATATGTGACCAACTTGTATACATTCAGAAGTCTTACTGCTTGCATTGTTTGCAATAACATTCCTGGTGCAGCACTTAAGATGACATCAATTGATaatgatatactgtaaatattcaTACTAGTGTTTCAATGTTGGATGGGacattaacatatatatatatacagtatacataattGTCAGCAACCTACTGTATCATTGGCTAAGACTTGCTTTGACTAAGGAACATGCTCTTGCAGTAAACCGGTATATTCAAAGCCATACTATAATGAGGTAGAAAAGAAACATTTCAAATGGGTTCCCATGTTTTTAATTCACCCCAATTTTGTTGctgcatttaaataaatgttttttcctGAAAACTCA
>XM_039801683.1
tCTCTATTCCTATATATGGAGTGTTCTCACTCATGCAAGCACGTCGTGCGTGCTGTACGTCATGACGCACTGCTGCTAGGGTTTTCTTCTCGCTACCCTACCCTGCCCTTCTCTGAGAGCCGTCACACATTCTTTGGTTTGCCGACACCTCGGACACACCTCAGCCGACACACAGCCatgTCTGACTTCTCGGAAGATCAAATCCTTGAGTTTAAGGAGGCATTCCTGCTGTTCGACAGGACAGGAGATGGCAAGATCAGCTTCAGCCAGTGTGGGGATGTCATGCGGGCCCTGGGACAGAACCCTGTCAATGCGGAGGTGCTCAAGGTCCTGGGCAACCCAAAGGCTGAGGAGATGAACAGCAAGATGCTAGACTTTGAGCAGTTCCTGCCCATGTTCCAGGCCATCGCTAAGAATAAAGATCAGGGCTCCATGGAGGATTTTGTGGAGGGACTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTAATGGGAGCAGAGCTTCGTCATGTCCTCACCACGTTAGGTGAGAAAATGACAGAGGAGGAAGTTGAGACGCTCTTGGCAGGACATGAAGACGCAAATGGTTGCATCAATTATGAAGAACTGGTCAGGATGGTCATGAACGGGTGAAGACAAAGAGCATCCAACTTTTTTTACCTTGTCACATGTACCCTTTTTTTGCAGTTAGCTTCTTCAGCCCCTCCCAACCTTTTCCATGGATTAGTTTTccacatttaatttaagaagtGCCTTTTACATTCCCTAATAAATACCACAAATAGCCCTGGCTATTGTTGCCAGGTCTATTAACATATGTGACCAACTTGTATACATTCAGAAGTCTTACTGCTTGCATTGTTTGCAATAACATTCCTGGTGCAGCACTTAAGATGACATCAATTGATaatgatatactgtaaatattcaTACTAGTGTTTCAATGTTGGATGGGacattaacatatatatatatacagtatacataattGTCAGCAACCTACTGTATCATTGGCTAAGACTTGCTTTGACTAAGGAACATGCTCTTGCAGTAAACCGGTATATTCAAAGCCATACTATAATGAGGTAGAAAAGAAACATTTCAAATGGGTTCCCATGTTTTTAATTCACCCCAATTTTGTTGctgcatttaaataaatgttttttcctGAAAACTCA
>XM_039801684.1
tCTCTATTCCTATATATGGAGTGTTCTCACTCATGCAAGCACGTCGTGCGTGCTGTACGTCATGACGCACTGCTGCTAGGGTTTTCTTCTCGCTACCCTACCCTGCCCTTCTCTGAGAGCCGTCACACATTCTTTGGTTTGCCGACACCTCGGACACACCTCAGCCGACACACAGCCatgTCTGACTTCTCGGAAGATCAAATCCTTGAGTTTAAGGAGGCATTCCTGCTGTTCGACAGGACAGGAGATGGCAAGATCAGCTTCAGCCAGTGTGGGGATGTCATGCGGGCCCTGGGACAGAACCCTGTCAATGCGGAGGTGCTCAAGGTCCTGGGCAACCCAAAGGCTGAGGAGATGAACAGCAAGATGCTAGACTTTGAGCAGTTCCTGCCCATGTTCCAGGCCATCGCTAAGAATAAAGATCAGGGCTCCATGGAGGATTTTGTGGAGGGACTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTAATGGGAGCAGAGCTTCGTCATGTCCTCACCACGTTAGGTGAGAAAATGACAGAGGAGGAAGTTGAGACGCTCTTGGCAGGACATGAAGACGCAAATGGTTGCATCAATTATGAAGCATTTGTCCGCCACATCATGTCAGGCTGAGGGCCGAACTGGTCAGGATGGTCATGAACGGGTGAAGACAAAGAGCATCCAACTTTTTTTACCTTGTCACATGTACCCTTTTTTTGCAGTTAGCTTCTTCAGCCCCTCCCAACCTTTTCCATGGATTAGTTTTccacatttaatttaagaagtGCCTTTTACATTCCCTAATAAATACCACAAATAGCCCTGGCTATTGTTGCCAGGTCTATTAACATATGTGACCAACTTGTATACATTCAGAAGTCTTACTGCTTGCATTGTTTGCAATAACATTCCTGGTGCAGCACTTAAGATGACATCAATTGATaatgatatactgtaaatattcaTACTAGTGTTTCAATGTTGGATGGGacattaacatatatatatatacagtatacataattGTCAGCAACCTACTGTATCATTGGCTAAGACTTGCTTTGACTAAGGAACATGCTCTTGCAGTAAACCGGTATATTCAAAGCCATACTATAATGAGGTAGAAAAGAAACATTTCAAATGGGTTCCCATGTTTTTAATTCACCCCAATTTTGTTGctgcatttaaataaatgttttttcctGAAAACTCA

Function

NR:

description
PREDICTED: myosin light polypeptide 6-like isoform X3

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12751 MYL6; myosin light chain 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801680.1 False 1190 mRNA 0.44 6 21737492 21746717
XM_039801681.1 False 1235 mRNA 0.44 7 21737482 21746717
XM_039801682.1 True 1250 mRNA 0.45 7 21737480 21746717
XM_039801683.1 False 1178 mRNA 0.44 6 21740522 21746717
XM_039801684.1 False 1213 mRNA 0.44 7 21740522 21746717

Neighbor

gene id symbol gene type direction distance location
c1galt1a LOC104956867 coding upstream 117279 21607339 ~ 21620201 (+)
LOC120559688 NA coding upstream 182285 21553252 ~ 21555195 (+)
slc26a10 LOC103368469 coding upstream 232560 21498706 ~ 21504920 (+)
arhgef25a LOC102292298,LOC100705949,LOC101484609 coding upstream 264106 21417136 ~ 21473374 (+)
kmt2d kmt2d coding upstream 377493 21323314 ~ 21359987 (+)
tmem9 tmem9,LOC107707676,LOC106572715,LOC107669678 coding downstream 29754 21776471 ~ 21780950 (+)
ribc1 NA coding downstream 76801 21823518 ~ 21827890 (+)
idh3g idh3g coding downstream 276117 22022834 ~ 22028294 (+)
zgc:158263 LOC104932850,LOC104967525,LOC101474144,LOC102796628 coding downstream 364270 22110987 ~ 22119609 (+)
cacnb3b LOC103363728,LOC104967530,LOC100705687,LOC101472360 coding downstream 437579 22184296 ~ 22199110 (+)
G51811 NA non-coding upstream 159225 21577388 ~ 21578255 (+)
G51761 LOC103385089,LOC104932540,LOC104956873 non-coding upstream 356231 21379001 ~ 21381249 (+)
G51739 NA non-coding upstream 361217 21376031 ~ 21376263 (+)
G51738 LOC104956875,LOC101062677 non-coding upstream 370450 21366676 ~ 21367030 (+)
G51737 acvr1b non-coding upstream 370903 21366301 ~ 21366577 (+)
G51900 smc1a non-coding downstream 65895 21812612 ~ 21813631 (+)
G51902 smc1a non-coding downstream 73148 21819865 ~ 21820675 (+)
LOC120559724 NA non-coding downstream 148624 21895341 ~ 21896456 (+)
G51921 huwe1 non-coding downstream 152407 21899124 ~ 21900231 (+)
G51922 huwe1 non-coding downstream 153727 21900444 ~ 21901003 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 17357 21717109 ~ 21720123 (+)
G51804 NA other upstream 178131 21558890 ~ 21559349 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other upstream 373050 21361290 ~ 21364430 (+)
G51716 NA other upstream 446518 21289588 ~ 21290962 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 1204911 20445971 ~ 20532569 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 36500 21783217 ~ 21807914 (+)
G51926 NA other downstream 156825 21903542 ~ 21904077 (+)
avpr2aa avpr2,LOC105897269 other downstream 300046 22046763 ~ 22060645 (+)
LOC120558641 LOC103363734,LOC104967523 other downstream 343480 22090197 ~ 22094890 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 809612 22556329 ~ 22560328 (+)

Expression


Co-expression Network