LOC120559736


Basic Information

Item Value
gene id LOC120559736
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14307962 ~ 14317786 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801713.1
GTACTTCCAGGAACAGTGCAGCTGTCGGAGGGGAGTGAGGCGCACGCAGCGGCCATGGACTGACATCTGAAAACTGCTCTTCTCTTTGAATTCATACAGACTCCATTTCACTCTAACATCTCCGATTCTTCCTCCAACTGATTCTTGGTGAAATTTATACAATCAAAAGAGGACCGTGAGGCCCAGGTCCTGCGCTCGTCCTCTTCCTCGTGCAATGCCGAAGAGTGACACGTGGCCAGGCAGCGTTGCCATGGAATCCTTGAGCAATTTGGACAGTGCCGGGAGCTGGGACAGTGTAATCAGCATGAACTCTGGCTATAGTGAAGACAGCATGGAGCACTTATCTCCCGAAGAGAGGGCATGTCTCATGTATCTGGAGGAAACCATAGAGGCGTTGGAGGTGCAGGAGGACAGCGGCTTATCCAATGATGAACCAGATCCTGGGTTACAGGCAGACAAAATGGGTCGGATGAGAGTAAATGataTTTCCAGTTTGGAGTCTGATGAGTCCGGAAGAGACCAGAAATCAGAGCCTGGATCCCGAGTGTTAACCATCGAAGACAAAGCTAAACATCACGCTCTAAATCAGACCTTAAAACCACAGTCCTCTCCGGCCCCTGCAGTCAACACCAACGACCTCGAAACATCAATGAACCACGTGACTCAACCCAAACGTCCAGTCACTGAATCAGTCGCTGATTGCAAAATCCACCCATCAGCTACTCAGTTGTGTGTATCCACGAATGGAGATGGTAGTCTCAAGATTGTCCCAAGTGCCAGTCTTTGCCCCAGTCAGGCCACTGGGGCCTCTGAGATAGATGTGGGTGTGATCCCTCCTCCCTCAGACTTCATGGATGAGCCAGGCCTTCCTCCAGTGCCAGGGAAAGTAAAATACCTTCCTCCTTCTGCAGGAATGCCCAATCACAAGCCAGGAACAACTATTGACTTGGAGCAGCTACGCCAGAGAGCCTCTGCACAGAAAACTTCAGTGAGTTCCTCTGGGACCCAGGAGTCTCCAAACAAGCCCCCAAAACTGAGTCTTCCTGCCGTCAGCTCTGGTGTCTTAATCAGTCCTCCCCCTGAAGCCGCTGAGCTCAGAAGTCCACCTGCAGTGGCCCCCAAGCCCAAGAAGCTTCCCGCCAACATTATTCTGAAGTCACACAAGGTAGCAGCGGCTGGCTCAGATGGCACCTCTGGACATCCGGTGCCCGCTAGCAGTGACCGGCTCTCGTTGGACCCCCAGAGGGTTCGCATTGAGGCCCTCCGAAAGCTTGGCCTGCTGCCTGCTGAGGCACATTCAGGCCCCGCCCTGAGCCCTAAACTTTCTCCCAATACTAGACGTTCATGGACAGCTCCTCCTTCTCCAGTCAGCCCAGCTGCTCCACATACACCACCCTTGATCCCATCTTACACCGGTGTCAACAGTCCACCACCTGCTTCCATCCCGCTCCAGTCTCCTGCAGCTGTGTTGCCATCGGCTACGTCTACCGCTCCTGCGGTCCAGCCTGCTGAGGTTCTCCCAGCACCCGCCGCTTTCAGTGACCCCGTTGGACCTCCGCCGTCTGATAACGACGCTGTCAAAGATGCTTCACAGGCCACAGTAAATGCACAGGTGAACACGCCCCCTCTCACACCCCCTGCACTGGTCAAGCATCTAACCCCACCCAAGGTGGTAGGTGTCAAGTCAGCCACCCTGGAGTGCTCTGGCCTGGGTATAAGCAGCTATATGGCTAGTCAAGACTCCAAGGAGGCCATCCAGGGTGTCAGCGGCAAGCAGAGCCTCAGCCAGCTACGTAACAATCGGGCACGCCCCGCATCTCTGGGGAGCGGGAAAGAGTTTACAAGAGCTCAGGGAGAGGGTTTGCTGGTGGGCCGTGCCAGCAGCAAAGAGCCAGACTTACGGAAGTCCCTGCCTGCCCAAACTGCCTTTCAGCACTCCGGAGAGTCTCAGAAGCTGCCTCGATCCCAAGGCATCAGTGTTCTCATCTGCCCTCGTGCAGAAAACGGAGAAAACCGCCGCGAGGCCCTGAAGAAGCTGGGGCTGCTCAGGGACTGAGGCATCGCTCTTACACCTCAACTTTCTGCCACAGACTTCCTATAGATGCTATATTTAAAAGGAACATACCAGACATTGATTCAGGAATGATGAAGGCATTACAAAACTTTCGGGGAGCAGCTTGAACCACTTATTTATGCACTTTCATTTTCACGTCTTGACTATATTGACTCATTGTCCTGTCCACTCTACTGTACTTGTTACTGATATTGTACAGCCATATGTACAGTGTTTTATTTCTCATGAAACTGTCAATCAAGGATTTTTTGGATATTCACTGACGCTCTTACTGTAGCTGTGCtttttgtaaattaaaaatACTGTTACTTTTAAGAGGCAGTGAGTTACTCTGTGATCAGGTATGAACCTTTTTGTACACACCAGTGTCTGTTTTCACACATTATTGTTTGTTACAGTGACACCACTGCGAGGCTGGTTCCCCTCTTACTTCTCCTTTTAGATACCTAAAGGTCACTTTTGTTTACTTTCACTTCCTAAAATCCGTTAcaattttttttgcttctttgaCCACGGGAACTGTCTAATATTTTGTGTACTTAACATGAGCTGCATTAATCTTAAATTGCTGTTTGTCAAAACAAATGGTTTTGCATCATAATTGGAGGGTGTTGAttaaatgaatacaaatgta
>XM_039801715.1
AGTTGTACTTCCAGGAACAGTGCAGCTGTCGGAGGGGAGTGAGGCGCACGCAGCGGCCATGGACTGACATCTGAAAACTGCTCTTCTCTTTGAATTCATACAGACTCCATTTCACTCTAACATCTCCGAGTGAAGACAGCATGGAGCACTTATCTCCCGAAGAGAGGGCATGTCTCATGTATCTGGAGGAAACCATAGAGGCGTTGGAGGTGCAGGAGGACAGCGGCTTATCCAATGATGAACCAGATCCTGGGTTACAGGCAGACAAAATGGGTCGGATGAGAGTAAATGataTTTCCAGTTTGGAGTCTGATGAGTCCGGAAGAGACCAGAAATCAGAGCCTGGATCCCGAGTGTTAACCATCGAAGACAAAGCTAAACATCACGCTCTAAATCAGACCTTAAAACCACAGTCCTCTCCGGCCCCTGCAGTCAACACCAACGACCTCGAAACATCAATGAACCACGTGACTCAACCCAAACGTCCAGTCACTGAATCAGTCGCTGATTGCAAAATCCACCCATCAGCTACTCAGTTGTGTGTATCCACGAATGGAGATGGTAGTCTCAAGATTGTCCCAAGTGCCAGTCTTTGCCCCAGTCAGGCCACTGGGGCCTCTGAGATAGATGTGGGTGTGATCCCTCCTCCCTCAGACTTCATGGATGAGCCAGGCCTTCCTCCAGTGCCAGGGAAAGTAAAATACCTTCCTCCTTCTGCAGGAATGCCCAATCACAAGCCAGGAACAACTATTGACTTGGAGCAGCTACGCCAGAGAGCCTCTGCACAGAAAACTTCAGTGAGTTCCTCTGGGACCCAGGAGTCTCCAAACAAGCCCCCAAAACTGAGTCTTCCTGCCGTCAGCTCTGGTGTCTTAATCAGTCCTCCCCCTGAAGCCGCTGAGCTCAGAAGTCCACCTGCAGTGGCCCCCAAGCCCAAGAAGCTTCCCGCCAACATTATTCTGAAGTCACACAAGGTAGCAGCGGCTGGCTCAGATGGCACCTCTGGACATCCGGTGCCCGCTAGCAGTGACCGGCTCTCGTTGGACCCCCAGAGGGTTCGCATTGAGGCCCTCCGAAAGCTTGGCCTGCTGCCTGCTGAGGCACATTCAGGCCCCGCCCTGAGCCCTAAACTTTCTCCCAATACTAGACGTTCATGGACAGCTCCTCCTTCTCCAGTCAGCCCAGCTGCTCCACATACACCACCCTTGATCCCATCTTACACCGGTGTCAACAGTCCACCACCTGCTTCCATCCCGCTCCAGTCTCCTGCAGCTGTGTTGCCATCGGCTACGTCTACCGCTCCTGCGGTCCAGCCTGCTGAGGTTCTCCCAGCACCCGCCGCTTTCAGTGACCCCGTTGGACCTCCGCCGTCTGATAACGACGCTGTCAAAGATGCTTCACAGGCCACAGTAAATGCACAGGTGAACACGCCCCCTCTCACACCCCCTGCACTGGTCAAGCATCTAACCCCACCCAAGGTGGTAGGTGTCAAGTCAGCCACCCTGGAGTGCTCTGGCCTGGGTATAAGCAGCTATATGGCTAGTCAAGACTCCAAGGAGGCCATCCAGGGTGTCAGCGGCAAGCAGAGCCTCAGCCAGCTACGTAACAATCGGGCACGCCCCGCATCTCTGGGGAGCGGGAAAGAGTTTACAAGAGCTCAGGGAGAGGGTTTGCTGGTGGGCCGTGCCAGCAGCAAAGAGCCAGACTTACGGAAGTCCCTGCCTGCCCAAACTGCCTTTCAGCACTCCGGAGAGTCTCAGAAGCTGCCTCGATCCCAAGGCATCAGTGTTCTCATCTGCCCTCGTGCAGAAAACGGAGAAAACCGCCGCGAGGCCCTGAAGAAGCTGGGGCTGCTCAGGGACTGAGGCATCGCTCTTACACCTCAACTTTCTGCCACAGACTTCCTATAGATGCTATATTTAAAAGGAACATACCAGACATTGATTCAGGAATGATGAAGGCATTACAAAACTTTCGGGGAGCAGCTTGAACCACTTATTTATGCACTTTCATTTTCACGTCTTGACTATATTGACTCATTGTCCTGTCCACTCTACTGTACTTGTTACTGATATTGTACAGCCATATGTACAGTGTTTTATTTCTCATGAAACTGTCAATCAAGGATTTTTTGGATATTCACTGACGCTCTTACTGTAGCTGTGCtttttgtaaattaaaaatACTGTTACTTTTAAGAGGCAGTGAGTTACTCTGTGATCAGGTATGAACCTTTTTGTACACACCAGTGTCTGTTTTCACACATTATTGTTTGTTACAGTGACACCACTGCGAGGCTGGTTCCCCTCTTACTTCTCCTTTTAGATACCTAAAGGTCACTTTTGTTTACTTTCACTTCCTAAAATCCGTTAcaattttttttgcttctttgaCCACGGGAACTGTCTAATATTTTGTGTACTTAACATGAGCTGCATTAATCTTAAATTGCTGTTTGTCAAAACAAATGGTTTTGCATCATAATTGGAGGGTGTTGAttaaatgaatacaaatgta

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption
ko04964 Proximal tubule bicarbonate reclamation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801713.1 True 2708 mRNA 0.51 4 14307966 14317786
XM_039801715.1 False 2517 mRNA 0.50 3 14307962 14317786

Neighbor

gene id symbol gene type direction distance location
LOC120558842 anks1a coding upstream 2351 14231135 ~ 14305611 (+)
LOC120558708 pacsin1,LOC102311157,LOC102795192,LOC103372886,LOC102200946,LOC107391251,LOC104932789 coding upstream 122822 14145227 ~ 14185140 (+)
oard1 oard1,LOC106909399 coding upstream 650586 13655553 ~ 13657376 (+)
guca1b guca1b coding upstream 653302 13652368 ~ 13654660 (+)
LOC120559296 ppp4r2 coding upstream 658066 13642629 ~ 13649896 (+)
scube3 scube3 coding downstream 8016 14325802 ~ 14402540 (+)
pcbp2 LOC103358643,LOC100702237,LOC101072611,LOC101159823,LOC103144045,LOC107094832,LOC107391117,LOC101487433 coding downstream 213368 14531154 ~ 14539601 (+)
aaas aaas coding downstream 234447 14552233 ~ 14561394 (+)
LOC120559201 gls2,LOC104942574 coding downstream 282491 14600277 ~ 14616442 (+)
LOC120559203 LOC102794447,LOC101484947 coding downstream 302362 14620148 ~ 14672002 (+)
G49665 NA non-coding upstream 77568 14229645 ~ 14230394 (+)
G49660 NA non-coding upstream 78870 14228370 ~ 14229092 (+)
G49663 NA non-coding upstream 84239 14223295 ~ 14223723 (+)
G49619 NA non-coding upstream 183426 14123652 ~ 14124536 (+)
LOC120558704 NA non-coding upstream 509310 13779267 ~ 13798652 (+)
G49718 NA non-coding downstream 84920 14402706 ~ 14403546 (+)
G49717 NA non-coding downstream 86109 14403895 ~ 14409162 (+)
G49720 NA non-coding downstream 93581 14411367 ~ 14417663 (+)
G49743 NA non-coding downstream 200988 14518774 ~ 14525189 (+)
G49761 NA non-coding downstream 227609 14545395 ~ 14546722 (+)
uhrf1bp1 uhrf1bp1 other upstream 80074 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 186940 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 582972 13658732 ~ 13724990 (+)
G49538 lmod3 other upstream 773040 13532390 ~ 13534922 (+)
LOC120559134 dvl1 other upstream 1421738 12860721 ~ 12886224 (+)
G49773 LOC103358639 other downstream 247081 14564867 ~ 14567456 (+)
G49776 NA other downstream 256756 14574542 ~ 14577572 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 1454431 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 1458431 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 1568204 15885990 ~ 15969331 (+)

Expression


Co-expression Network