ptges3a (LOC107390842,LOC103368333,LOC104967534,LOC100704884,LOC106525288,LOC108244561,LOC101471106)


Basic Information

Item Value
gene id ptges3a
gene name LOC107390842,LOC103368333,LOC104967534,LOC100704884,LOC106525288,LOC108244561,LOC101471106
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22240482 ~ 22244763 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801775.1
GGAGACTCGTGGTGGAGCTCTTGAGCTGCTCTGGAACACTGAGCTCACTCGTTCTAGAATTGTCTCCGACGGCTCCATGCTTCGGTCTGTGAAACGgcagcCTGCAACAGCCAAGTGGTATGACAGACGAGACTCTGTTTTTGTAGATTTCTGCGTGGAGGACAGTAAAGAtgtaaaagtacattttgaCAAGTCCAAATTTGATTTCAGCTGCATCACTGGaacagataatatcaaacatCAGAATACTGTGGACCTTTTCGGGGAGATTGACCCCAAAGGCTCTAAATACAGGCGCACTGACAggtctgtgttgtgttgtttacgAAAAGCAGAGGCTGGGAAATCATGGCCACGACTTACCAAAGACAAGTCAAAGTGCAACTGGCTGAGTGTGGACTTCAATAATTGGAAAGACTGGGAGGATGACTCAGAAGAGGACTTGTCAAGTTTTGATAAATTCTCAGAGATGATGAACACAATGGGAGGGGATGATATACCTGATTTAGATGGTGCAGAAGAAGAGCATGATTCTGCAGACAATGACGATGAAAAAATGCCCGACCTTGAGTAGATGAACATGGGTGCCACCTCAGTAGTAAACAAGGCAAGTTAAAAGTCGGTTGAAGATAGAGAATAGACATGAgttggcagccatgttggagaAGAGACCTCATCACTCTACTCAGTTTCCAAAGCGAAACCCCTCAAGGGAGTGACTGTTGGATACAGACATGCACAGAGATCCATAGCGACATACAGTGCTGTGCTTTGCTGTTCTGTTCTGCATGGACAATTCTGTTGAAAGGAAAATGTTATTGTTCATTGACTTAAATGACTGTAATGGGATGTGTGCTGTCTtacaccttctctctctctctctctctttctgttttttgcGATGTCAGGTTATGTATTAAACATTGTGATTtctaatggggaaaaaaaactcaaaatgccTATTTTCCAAaaagtagaattttttttaatgacagatTTTCCCCTTTTAATGTTTGTATTGTAAAATGCACTTATTTTGTTCGTTAATTTAAAAAGCAGGCGTTGAGCTTGAAATGGTTTTTCCAATGTATGCCAACATCTGCACATATTTAACAATgatgatttcatttttaaacatttcagcatttaaaaTAAACTGATACGCTTGTGCAATTTACAGCTTTTGTTGAGATTATGGTAGAGTGGTACAATCTTTGCATATAATCATACCATTTGCAAAGTTGAGTTTTGTTTCTCTATGCCAGTGTACGAAACATTGTAGCAGGTACGATTAATTTTCTTCCATATGCATACTGAGGTGAAGGCAGACATACTATGTGGTCTAACAAGAGTTTCCAAATAGTTAAAATACAGGATTTAAATGTGCGTTAATCAGAAACACTATATGCTTTGGAGGCTTGTGTGTTTGATTCAACACGTGTTGAACACTTCCATTTGTCTTATGCTGTGGGAGTTTGGGTATGCATTTCTAATAAACTGTTTCAGACCATTGAA
>XM_039801776.1
CACGAGAAAGGAAAACACGCGATGTTTGGACGCAAACTGCTTCTGTCGTGAACATTTTACAGTTAACCGTTTAGGTATTTCAGGAGCTAACGCAAACACAATCTATATCGTGGTCCAACGGGGAAGTTTAATTGCTAAACAGTGGAGATgcagcCTGCAACAGCCAAGTGGTATGACAGACGAGACTCTGTTTTTGTAGATTTCTGCGTGGAGGACAGTAAAGAtgtaaaagtacattttgaCAAGTCCAAATTTGATTTCAGCTGCATCACTGGaacagataatatcaaacatCAGAATACTGTGGACCTTTTCGGGGAGATTGACCCCAAAGGCTCTAAATACAGGCGCACTGACAggtctgtgttgtgttgtttacgAAAAGCAGAGGCTGGGAAATCATGGCCACGACTTACCAAAGACAAGTCAAAGTGCAACTGGCTGAGTGTGGACTTCAATAATTGGAAAGACTGGGAGGATGACTCAGAAGAGGACTTGTCAAGTTTTGATAAATTCTCAGAGATGATGAACACAATGGGAGGGGATGATATACCTGATTTAGATGGTGCAGAAGAAGAGCATGATTCTGCAGACAATGACGATGAAAAAATGCCCGACCTTGAGTAGATGAACATGGGTGCCACCTCAGTAGTAAACAAGGCAAGTTAAAAGTCGGTTGAAGATAGAGAATAGACATGAgttggcagccatgttggagaAGAGACCTCATCACTCTACTCAGTTTCCAAAGCGAAACCCCTCAAGGGAGTGACTGTTGGATACAGACATGCACAGAGATCCATAGCGACATACAGTGCTGTGCTTTGCTGTTCTGTTCTGCATGGACAATTCTGTTGAAAGGAAAATGTTATTGTTCATTGACTTAAATGACTGTAATGGGATGTGTGCTGTCTtacaccttctctctctctctctctctttctgttttttgcGATGTCAGGTTATGTATTAAACATTGTGATTtctaatggggaaaaaaaactcaaaatgccTATTTTCCAAaaagtagaattttttttaatgacagatTTTCCCCTTTTAATGTTTGTATTGTAAAATGCACTTATTTTGTTCGTTAATTTAAAAAGCAGGCGTTGAGCTTGAAATGGTTTTTCCAATGTATGCCAACATCTGCACATATTTAACAATgatgatttcatttttaaacatttcagcatttaaaaTAAACTGATACGCTTGTGCAATTTACAGCTTTTGTTGAGATTATGGTAGAGTGGTACAATCTTTGCATATAATCATACCATTTGCAAAGTTGAGTTTTGTTTCTCTATGCCAGTGTACGAAACATTGTAGCAGGTACGATTAATTTTCTTCCATATGCATACTGAGGTGAAGGCAGACATACTATGTGGTCTAACAAGAGTTTCCAAATAGTTAAAATACAGGATTTAAATGTGCGTTAATCAGAAACACTATATGCTTTGGAGGCTTGTGTGTTTGATTCAACACGTGTTGAACACTTCCATTTGTCTTATGCTGTGGGAGTTTGGGTATGCATTTCTAATAAACTGTTTCAGACCATTGAA

Function

NR:

description
PREDICTED: prostaglandin E synthase 3-like

GO: NA

KEGG:

id description
K15730 PTGES3; cytosolic prostaglandin-E synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801775.1 False 1515 mRNA 0.40 8 22240482 22244763
XM_039801776.1 True 1568 mRNA 0.39 8 22240584 22244763

Neighbor

gene id symbol gene type direction distance location
rnd1b LOC101472065,LOC103358261,LOC100705424,LOC104932892,LOC103384592 coding upstream 26618 22203091 ~ 22213864 (+)
cacnb3b LOC103363728,LOC104967530,LOC100705687,LOC101472360 coding upstream 41372 22184296 ~ 22199110 (+)
zgc:158263 LOC104932850,LOC104967525,LOC101474144,LOC102796628 coding upstream 120873 22110987 ~ 22119609 (+)
idh3g idh3g coding upstream 212188 22022834 ~ 22028294 (+)
ribc1 NA coding upstream 412592 21823518 ~ 21827890 (+)
mipa LOC103368323,LOC101065051,LOC100704616 coding downstream 2192 22246955 ~ 22248730 (+)
LOC120558509 NA coding downstream 143786 22388549 ~ 22397004 (+)
LOC120559492 def6 coding downstream 256693 22501456 ~ 22515546 (+)
ppardb ppard coding downstream 272476 22517239 ~ 22524940 (+)
mkrn4 NA coding downstream 280534 22525297 ~ 22530706 (+)
G52060 LOC104967533,LOC103368342 non-coding upstream 3300 22235156 ~ 22237182 (+)
LOC120558498 NA non-coding upstream 64071 22173144 ~ 22176411 (+)
G52035 NA non-coding upstream 103150 22111469 ~ 22137332 (+)
G52031 naa10 non-coding upstream 133537 22105645 ~ 22106945 (+)
LOC120558642 NA non-coding upstream 154249 22085266 ~ 22086233 (+)
G52064 NA non-coding downstream 9532 22254295 ~ 22254973 (+)
G52054 NA non-coding downstream 95620 22340383 ~ 22346646 (+)
G52179 NA non-coding downstream 229467 22474230 ~ 22476314 (+)
G52185 NA non-coding downstream 235780 22480543 ~ 22484101 (+)
G52272 lhfpl5,LOC102777996 non-coding downstream 385831 22630594 ~ 22631144 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 145592 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 179837 22046763 ~ 22060645 (+)
G51926 NA other upstream 336405 21903542 ~ 21904077 (+)
LOC120559721 cacna1s,LOC103368470 other upstream 432568 21783217 ~ 21807914 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 520359 21717109 ~ 21720123 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 311566 22556329 ~ 22560328 (+)
LOC120559933 NA other downstream 317391 22562154 ~ 22562521 (+)
lamtor5 lamtor5,LOC102787529 other downstream 597281 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 746489 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1501602 23746365 ~ 23765165 (+)

Expression


Co-expression Network