LOC120559823 (LOC103368780,LOC104958736,LOC100707957)


Basic Information

Item Value
gene id LOC120559823
gene name LOC103368780,LOC104958736,LOC100707957
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 15850652 ~ 15855043 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801853.1
aaaaaaaactccccatGCATCGGAATGGTAAAACGAGAATGTGCATGGAGGACCCTGGTACGATGTGGAGTAGTTGAAGTTGATGAAGAGATTATTGGCtataaaacatttgcatttaaactTAACGTGAATTAAAGGGTAATCAGGTCTCCATTAGACCTGGGGCAGGTCAGATTCTCTGACTGATGGAAATAGAGAAGAGGAAAAGGGGGACATCTCTTCACTCAAGCAGAAGCGCCATGCACTGGCGGAGCAACATTCAGTGCTTCTTTTTTTCCGGATGAAATGTAGTTTATCGTCGTTTGGTGGACCATGTAGTAAGTGTTTGTGCTTGCATGTAGTATGATATTGAGTCCGATATGTCTAATGTGACGCCGAGTAAAAGCGTGGAATGGCTGCAACTCGAGTTAGAGTCCGGAGGCACTTCTCTGCTCCTGCTGGACTGCCGTTCACATGAGCTTTATGAATCATCCCACATAGAGACCGCCATAAACCTGGCCATACCGGGGCTGATGCTCCGGAGGTTTAAAAAAGGCAACATACCTATCCGGACTATCATCCCCAACCATGAGGATAAAGAGAAGTTCATAAGACGGTGTAAGACGGACACGGTCGTCCTGTACGATGAGTGTACCATGGACTGCCAGGACAGTGGAGCTCCAGCCTCGGTTTTGGGTCTACTTCTTCAAAAACTATGGGAAGACGGGTGTAAAGCGTTTTACCTGGAAGGTGGATTTGTAAAGTTCCACACAGTGTATCCAGAGCACTGTGAGACCCTCATAGACAGCTCCTGTCCCAGTTCTTCTCCTCCGCTGTCTGTCCTGGGTTTTGGAAATCTCCGGATCAGCTCAGATTGTTCTGATGGGGAATCTGATCGAGAGCCGAGCAGTGCCACAGAGTCTGAGGAGAGCCCCATCCCCAGCAATCAGCCTGCCTTCCCCGTCCAGATCCTACCCTACCTTTACCTGGGCTGCGCCAAAGACTCCACCAACCTAGACGTGCTGGGCCAGTACAACATCAAGTACATCCTGAACGTCACACCCAATCTCCCCAACATGTTTGAGCATGACGGCCACTTCAGGTACAAACAGATCCCCATTTCGGACCACTGGAGTCAGAACCTGTCCCAGTTCTTCCCAGAAGCCATAACATTTATAGATGAGGCTCGGTCTAAGCAGTGTGGCATCCTGGTCCACTGCCTTGCTGGCATCAGTCGCTCAGTCACAGTCACCGTGGCCTACCTGATGCAGAGACTCAACCTCTCGCTCAACGACGCTTATGACTTTGTCAAGAGGAAGAAGTCCAACATTTCCCCAAACTTCAACTTCATGGGTCAGCTTCTGGACTTTGAGAGGACGCTGGGGCTGCACAGTCCCTGTGATAACCGTTCCACCAGCGAGGAGCAGCTCTTCTTCACCACACCAACCAATCACAACGTCTTCCAGCTGGACACACTGGAGTCTACATGAGGATTGATTAGATAGCCTTTGTGCCATTTCCTGGTGTCTCTGAGGGTTTTCTGAGCCTGTCAGATGCCGAGCTAGCTGACACAAGGAGTAAGTCAGTTACAGTATTTCTGCACCAAAAGGAACTACATTGATCTGTTAAAGGAACAGAGTCCGTATTGTAGAGAACATGATACATTAGATCCTGCCTGCCTTAATTTCTAACACAAGGATGACTTTTGCTATCAATGGCATTAATCAATGGTCATGTACGGCCATAAAAGCAGGACATTTCATAACTTTTCTGTTAATCTAGAATTGTTGTTTGACTGTTATTTGTTATTCACCAGCTGTAAAGCGGTTCTTTGTATACGTTGTAATTATTGCCTTGGTGGTCTAAACAAAAAGTCTTTGGCCAATCAGAATGTTTTCTGGGGTCCAATCCAAGATGTTTTTGATGGTACTCTTACTGAGGGCAAAAAGCTACTACAGTGATCCGGCCTTGAATTATTGTCCAGTTTTTCTTCTGATGACTGTCTGCAGCTCACTTGCTTACCACAGAAAGCATATTTTCGTGTGCTATCACTCAGAATACCTTCACTAATGTCTGGTAAGCACCATTATGTTAAACAGTTATTCTTTAAATACAAGATTGAGTGTTCACATTCTGTTAAAATATCAAAGTGAAAACATATTATTCTCCAGAAACACTCCTGTACATTTTATTGCTTATAACTGCATTATTTGCATGTGATCATGTTCTACCAAGGACCTTGTTTTGTAACCTTTAGGTCATATTTCCTGTTGTTGTTGAGGCCTTGACCGTAACTTAACATGGAATTGAACTATTTGTCAGTTACCAGGTCGAGGTATACTGTATAGGACTGGCTTTTGCCACAATGGAAAGGAACAAATGTGTAAGTAATCAGTGTATAAAGGAATGGATgttcacattattttttactcCAACAGTCTTCAGTCTGCAGCTACTCCTTCAGTGGCACAGCGATGTGTAATTAGCTGTTCTCTATTGCCAGTCTCGTCTCAGAACAAATGAGTGAGTTTGATGTatgagaggaaaggaaaggaaattaatttgacaaATGTGTTCTTACCTCACAGAGAGACATTTTCAGGGATTTTTATACAAGTCATCTGTATCTCGTCATGGCCTCTTAAAGTGCATCCAAGGGCTGTTTCGTTTGGTATGTTTgtaaagatgtacaaaaaatgtGGTCGTTATGGGGGACGTTTTCTTAAAATCATGAAGGATGTGAAAGTGACCCTATTTTGACCCTTATGTATAGTATATGTAAAGCTAAATGTCCAAGACATTCTGTACAAGTTTatacaacaaatatattgtatatttttacttgaa

Function

NR:

description
PREDICTED: dual specificity protein phosphatase 7-like

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801853.1 True 2826 mRNA 0.44 3 15850652 15855043

Neighbor

gene id symbol gene type direction distance location
LOC120558427 LOC104958737 coding upstream 2857 15841943 ~ 15847795 (+)
spo11 spo11,LOC103368783 coding upstream 9875 15833183 ~ 15840777 (+)
mtg2 mtg2 coding upstream 150276 15697279 ~ 15700376 (+)
LOC120559909 ss18l1,LOC102784650 coding upstream 153774 15687325 ~ 15696878 (+)
lsm14b NA coding upstream 164461 15682257 ~ 15686191 (+)
syn2a LOC103368776,LOC108232134,LOC102310081,LOC100708766,LOC102780991,LOC102197631,LOC101471639 coding downstream 67331 15922374 ~ 15934225 (+)
cnbpa cnbp,LOC100709667,LOC101470196 coding downstream 97459 15952502 ~ 15956674 (+)
LOC120559633 LOC102199705,LOC100709941 coding downstream 102540 15957583 ~ 15961003 (+)
LOC120559610 fbln2 coding downstream 248316 16103359 ~ 16127076 (+)
LOC120559808 NA coding downstream 280297 16135340 ~ 16136813 (+)
G50029 NA non-coding upstream 145184 15705096 ~ 15705468 (+)
G50017 NA non-coding upstream 181108 15667249 ~ 15669544 (+)
G50011 NA non-coding upstream 211351 15637483 ~ 15639301 (+)
G50014 NA non-coding upstream 428044 15422319 ~ 15422608 (+)
G50003 NA non-coding upstream 573006 15277446 ~ 15277646 (+)
G50077 NA non-coding downstream 94206 15949249 ~ 15951172 (+)
G50218 NA non-coding downstream 430514 16285557 ~ 16285759 (+)
G50280 NA non-coding downstream 570575 16425618 ~ 16425820 (+)
LOC120558722 NA non-coding downstream 689226 16544269 ~ 16545835 (+)
G50318 NA non-coding downstream 711958 16567001 ~ 16569382 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other upstream 51695 15772217 ~ 15798957 (+)
G49776 NA other upstream 1273080 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 1283196 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 1622764 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 1729630 14113015 ~ 14121022 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 30947 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 449269 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 467778 16322821 ~ 16379645 (+)
brpf1 brpf1 other downstream 525001 16380044 ~ 16396208 (+)
LOC120559923 NA other downstream 542626 16397669 ~ 16408461 (+)

Expression


Co-expression Network