si:ch211-210c8.6 (LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155)


Basic Information

Item Value
gene id si:ch211-210c8.6
gene name LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11516644 ~ 11520131 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801862.1
CATTACCCAGAGTTCCCTGCGGCCAAGCCACTCCCAGTAGGCTAGTAGAATGGCAGCGGTGAACTTTACCCGGagtgtttaataaatatttctGTTGGTGTGGGAGGAGTGGCCCTTTGATAAATGGTCACATCGCTTCGCTGCTCGCCGACCTGCAGGACGTGATCATGGGCAGCACTCTGGCCAGGTGTGCCGCCACCGACCTGGGCATCCAGTGGGCCGGCTGGGCTCTGGCTGCAGCTTTCAGAACCGAGAAGTTTTATGATTTGGCAGGATCTGGCACATTTATACTACTTGCCCACCTGAGTCGTATCTGGGGAGGAGCCAGTCATGTCCGCCAGAAGGTGCAGACTGGGTTGGTGACAGCATGGGGACTCAGGCTGGGGACATTCCTCTTCATGCGGATCTTGAAGGACGGTCACGATCGCAGGTTCAACAATGTCAGAGACAGCCCAGGGACTTTCTTTGTGTATTGGACTGTTCAAGcactgtGGGTATTTATGACCCTCCTGCCCACCCTCATGCTGAATAGCGAGAAGCGAGATGTGCCTCTGGGAACGAGGGACTACCTCGGCTGGACTATATGGGGCCTGGGCTTCGCTGCTGAAGCTATTGCTGATCAGCAGAAATGGCTTTTCAAGCGGGACCCAGATAATGCTGGGAAGTTCATCCAGAGTGGCCTATGGGCTTACAGCAGACACCCGAACTATTTTGGAGAGATCCTGCAGTGGTCGGGTCTCTGGCTCTCGGCCTCATCAGTGATGCAGGGTCCCCAGTACCTGAGCGTGGCGTCGCCTCTCTTCGTCTGGTTCCTGCTGCGTTACGTCAGCGGCATCCCCATCCTGGAGAAGCAGGCCGTGAAGAAGTGGGGATCGGTTCCAGGCTTCCAGGACTACATCAAGAACACTCCTCTTCTCTGGCCATGGCCTAAATTTTAATGTTACATTGATGAACATTTTCTCAACTGCTGTACCAACATTTGCCTCAGGCAAAGAACGTTTACACATTTATCAGTGTCCTGAGCAAAACCCAgaatttctgacattttctgtTATTCTGTCAAATAAATTCCAGTTTATCACACAGTCTTCAAATGA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801862.1 True 1097 mRNA 0.52 5 11516644 11520131

Neighbor

gene id symbol gene type direction distance location
dazap2 dazap2 coding upstream 13090 11498872 ~ 11503554 (+)
rapgef3 LOC103365870 coding upstream 134495 11352614 ~ 11382149 (+)
LOC120558497 NA coding upstream 188025 11317430 ~ 11328619 (+)
LOC120558407 NA coding upstream 705092 10758397 ~ 10811552 (+)
LOC120558406 NA coding upstream 769091 10593784 ~ 10747553 (+)
LOC120558490 LOC102302598,LOC100690975 coding downstream 12068 11532199 ~ 11563315 (+)
cs cs coding downstream 43984 11564115 ~ 11579004 (+)
ankrd52a ankrd52 coding downstream 66747 11586878 ~ 11609087 (+)
rnf41 rnf41 coding downstream 96744 11616875 ~ 11622841 (+)
dgkaa LOC103366011 coding downstream 104761 11624892 ~ 11647281 (+)
G48807 NA non-coding upstream 52565 11463273 ~ 11464079 (+)
G48806 csrnp2 non-coding upstream 54668 11461148 ~ 11461976 (+)
G48805 csrnp2 non-coding upstream 56895 11459342 ~ 11459749 (+)
G48803 NA non-coding upstream 59770 11435044 ~ 11456874 (+)
G48856 NA non-coding downstream 74132 11594263 ~ 11594475 (+)
G48859 NA non-coding downstream 83276 11603407 ~ 11603702 (+)
G48860 NA non-coding downstream 83588 11603719 ~ 11603984 (+)
G48854 NA non-coding downstream 178895 11699026 ~ 11699956 (+)
LOC120559500 NA non-coding downstream 192673 11712804 ~ 11720917 (+)
G48765 NA other upstream 200652 11314662 ~ 11315992 (+)
G48752 NA other upstream 342990 11172595 ~ 11173654 (+)
G48640 NA other upstream 766216 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1365393 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 1591563 9922600 ~ 9925081 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 564321 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 572648 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 662078 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 703436 12223567 ~ 12223638 (+)
LOC120559657 LOC102305201 other downstream 725514 12245645 ~ 12254060 (+)

Expression


Co-expression Network