guca1b (guca1b)


Basic Information

Item Value
gene id guca1b
gene name guca1b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13652368 ~ 13654660 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801872.1
GTCCATAAtagcctgtgtctgtgtctgactCTCAGAGGGGATTTGCCACAATAGAGAGTCCAATAACAATTCAGTTTGTATGGACTTTCATGTCATTTCAATCGATTTGATCTTTTGCTGATCTTTCGCAGTAATTGGCTCGATAACGGAGGACTCAAATTTGTGGATTCGGTAATGTGGAGggaagctttaaaaaaaagttactcaGCTCAAACAGTTTCATGTAATGTAAGAAATAATTTCAGTCTTTAGGgagttgaagaaaaaaattccACAATGGGTCAGCGCCTAAGCGAGGAGAGTGACCCAGACAAGGAAATCGATGTGGCAGAGCTGCAGGAATGGTACAAAAAATTTGTTGTGGAGTGCCCAAGTGGAACTCTCTTTATGCATGAGTTCAAGGGATTTTTTGGCGTTGCTGATAACAAGGCGGCCGGAGATTACATTGAAAACATGTTTCGAGCCTTTGACAAGAACGGCGACAACACTATTGATTTTCTGGAGTACGTGGCAGCCTTGAACCTGGTCCTGAGGGGTAAACTGGAGCATAAGCTTAAATGGACATTCAAAATGTATGACAAAGACGGAAGTGGATGCATTGATAAAACAGAGCTTCTTGAAATTGTGGAGTCTATTTATCGACTGAAGAAAGCCTGCCATGGAGAGCTGGATAAAGATTGCCTTCTGCTGACCCCAGACCAAGTGGTTGACCGGATATTTGAGCTGGTGGATGAAAATGGAGATGGGGAGCTCTCGCTGGATGAGTTTATTGATGGAGCACGGAGGGACAAGTGGGTGATGAAGATGCTACAGATGGACGTCAACCCCGGGGACTGGCTCAACGAGCGAAGGCGCAGTTCTGACTCCTAAGGCTGGAACATGGACTATCAGTctgtcacatactgtacaagcaTCCTTTATGTGTGACCAATCATGTTGTGATTTTGTATCTATTGCAGTTATAAAAGACAACACCATAGTCATCCTGGTATTGTTCTGTATGCTATAAGAATTAGATGTATGTCTACAACAATACTGTACTTTGCTTGTAAAACTATGGCTGCTATGGTCTTGTAGGTCTGtctatacagtatgtctgtatTTTACAGATGCTGCAGACAAAAGGTGCttcctgtattttctttttttgttttgtcataaaatgaacataaaagtgattcaataaaaataattaaagccCCTACACAACTGGGATCTGTCATTGACAAGTGGTTCAAGTTGATTAGACCTCTtctcaggactgtgtgggtgtgtacagAA

Function

symbol description
guca1b Enables calcium ion binding activity and calcium sensitive guanylate cyclase activator activity. Predicted to act upstream of or within visual perception. Is expressed in retina. Human ortholog(s) of this gene implicated in retinitis pigmentosa 48. Orthologous to human GUCA1B (guanylate cyclase activator 1B).

NR:

description
guanylyl cyclase-activating protein 2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801872.1 True 1281 mRNA 0.42 4 13652368 13654660

Neighbor

gene id symbol gene type direction distance location
LOC120559296 ppp4r2 coding upstream 2472 13642629 ~ 13649896 (+)
LOC120559547 mitf coding upstream 46933 13564625 ~ 13605435 (+)
LOC120559207 arl6ip5,LOC102786473,LOC101476305,LOC101073283 coding upstream 120880 13527308 ~ 13531488 (+)
LOC120558357 LOC105928557,LOC103355067,LOC101477339 coding upstream 152926 13474266 ~ 13499442 (+)
slc16a7 LOC104955228,LOC103355059,LOC105928617 coding upstream 200461 13448308 ~ 13451907 (+)
oard1 oard1,LOC106909399 coding downstream 893 13655553 ~ 13657376 (+)
LOC120558708 pacsin1,LOC102311157,LOC102795192,LOC103372886,LOC102200946,LOC107391251,LOC104932789 coding downstream 490567 14145227 ~ 14185140 (+)
LOC120558842 anks1a coding downstream 576475 14231135 ~ 14305611 (+)
LOC120559736 NA coding downstream 653302 14307962 ~ 14317786 (+)
scube3 scube3 coding downstream 671142 14325802 ~ 14402540 (+)
G49562 NA non-coding upstream 10494 13616877 ~ 13641874 (+)
G49572 NA non-coding upstream 13275 13636866 ~ 13639093 (+)
G49508 NA non-coding upstream 205633 13445139 ~ 13446735 (+)
G49502 NA non-coding upstream 219151 13432599 ~ 13433217 (+)
G49474 NA non-coding upstream 273959 13365731 ~ 13378409 (+)
G49585 LOC103355245,LOC104927444,LOC101062607 non-coding downstream 70428 13725088 ~ 13732249 (+)
G49591 NA non-coding downstream 94898 13749558 ~ 13750842 (+)
LOC120558703 NA non-coding downstream 103927 13758587 ~ 13992115 (+)
G49598 NA non-coding downstream 109899 13764559 ~ 13766112 (+)
LOC120558704 NA non-coding downstream 124607 13779267 ~ 13798652 (+)
G49538 lmod3 other upstream 117446 13532390 ~ 13534922 (+)
LOC120559134 dvl1 other upstream 766144 12860721 ~ 12886224 (+)
LOC120559236 LOC103354867 other upstream 807934 12794943 ~ 12844434 (+)
LOC120558314 porcn other upstream 994060 12652384 ~ 12658308 (+)
G49209 NA other upstream 1193929 12452535 ~ 12458439 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 4072 13658732 ~ 13724990 (+)
hmga1a hmga1,LOC103355299 other downstream 458355 14113015 ~ 14121022 (+)
uhrf1bp1 uhrf1bp1 other downstream 550937 14205597 ~ 14227888 (+)
G49773 LOC103358639 other downstream 910207 14564867 ~ 14567456 (+)
G49776 NA other downstream 919882 14574542 ~ 14577572 (+)

Expression


Co-expression Network