LOC120559844 (atad3a,LOC103366266,LOC102783555)


Basic Information

Item Value
gene id LOC120559844
gene name atad3a,LOC103366266,LOC102783555
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29812163 ~ 29821637 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801879.1
GTTTGGCCGGAAGTTTTTTCACCTGTTGGTGTACTTGACTCTGGCCCAACAAGCATGAGCTAGAGAACTGTTGTGGAGGCTCTAAAACTTAAAGTACTGCAGCCTGTTGCTCGGGCGCTGTTGAAGCAGCATGTCGTGGCTCTTCGGCTGGGGGAAGGGCTCCGGTTCGCCGCCAGCGGACGCGCAGACAGCGGCTGCTCTTGCTGAAGGAGCCGGAGGTGAAACTGGAGATCCAGGGGGAGGCAAACCCGGGGACAAATGGAGTAACTTTGACCCGACTGGGCTGGAGAGAGCTGCAAAAGCTGCAAGGGACCTCGACAAATCACGACATGCCAAAGAAGCGCTGGCCCTGGCTCGTATGCAGGAGCAGACTGTACAGCTGGAGCATGAGAGTAAAGTGAAAGAATATGAGGCAGCTTTGGAGCAGCTGAAGGGCGAGCAGATCCGCCTCCAAGGCGAGGAGAGACGCAAAACACTGGCAGAGGAGACAAAGCAAAACCAGGCAAGGGCACAATATCAAGACAAACTTGCCAGACAGAGGTATGATGATCAGCTCAGGCAACAGCAATTCCTCAATGAGGAGAACCTTCGCAAACAAGAGGAATCGGTTGTGAAACAAGAGGCCATGAGAAAAGCTACCATTGAACATGAAATGGATCTGAGACACAAGAATGACCTGCTTCGAATTGAAGCGGAGGCCAAAGCCCGTGCCCAGGTGGAGAGGGAGAACGCAGACCTGATCAGGGAACAGATccgcctgaaggctgctgaacACAGACAAACTGTCCTTGAATCTATAAAGACGGCAGGAGCCGTGTTTGGGGAGGGATTCAGAGCCTTCGTCTCTGACTGGGACAAACTCACAGCCACGGTTGCTGGGTTGACCCTGTTGGCAGCAGGAGTGTATACTGCCAGGAACACCACAGGAGTGGCCGGCCGCTACATAGAGGCTCGTTTAGGAAAACCCTCGCTGGTCCGAGAGACCTCCCGGATAACTGTGGCAGAGGCCATCAAACATCCAATCAAGACAGCCAAGCGCCTGAGAAGCAGACCACAGGATGCCTTGGAGGGCGTGGTGCTCAGCCCAACTTTGGAGGAACGTGTAAGGGACGTTGCCATCGCCACTCGAAACACCAGGCAGAACAGAGGCTTGTACAGAAACATCCTGATGTATGGACCCCCTGGAACTGGAAAAACACTCTTTGCCAAGAAATTGGCTCTCCATTCAGGGATGGACTATGCCATTATGACAGGTGGCGATGTGGCACCCATGGGGCGCGACGGAGTCACTGCCATGCACAAGGTGTTTGACTGGGCCAGCACCAGCAGGCGAGGCCTCTTGCTGTTCGTAGATGAAGCTGATGCATTCCTGCGTAAGCGAGCCACAGAGAAAATCAGTGAGGACCTCAGAGCCACCCTGAATGCATTTCTCTACCGCACTGGGGAGCAGAGCAACAAgtTCATGCTGGTGCTTGCCAGTAACCAGCCAGAACAGTTTGACTGGGCCATTAATGACCGCATTGATGAGATTGTAAACTTTGCGTTACCTGGTCTGGGCGAGAGGGAAAGATTGGTGCGCCTGTATTTCGACAAATTTGTGCTGGGTCCTGCCACTACAGGGAGACAGAGATTAAAACTGGCTCAGTTCGACTATGGCCAGAAGTGCTCAGACATTGCAAAGCGAGCAGAAGGCATGTCCGGTCGTGAAATCTCCAAACTTGGTGTGGCCTGGCAGGCTGCCGCATACTCTTCTGAAGATGGAGTTTTGACCGAAGCGATGATTGACTCAAGAGTTGATGATGCCATCAAGCAGCATGCACAGAAAATGGACTGGCTGCTGATGGAAGCAGGTGTGGGGGTTGGCAAGGTCGGTGTACACCTCCCTAAGGAAATGGTTGCAGGAATCACAGCCCAGGAAGCTTCTTCATTGGCACAAACTGAAGTGACAGCCCCGACTGTACAACAAGTCCTTCCACTTCTCGAGGTTGTGAGCAATGCTATCCAGGCAGAAGCAGCCGCTCATCCTTCAGAGGTAGAGGCAGATGCTATCCTCAAAGAGGCAGCCACATTGGTTAAAGAAAGTGAAGTCTTGAATGATACAGTTAAAACCGTTGTTGAGACAGCTACTGCTGTCCCTTTGGTGCAGGAGGTTGAGGCCGTCAAGGACCTGACTGAGGAGGTTCTAGGTGCAGCTGTAGCTACAGACACTGTTGTTCCTGAGGTAAAGGATATAGTCACTGAGGTTAAAGAGGCTGAGGGTATACCAGTTTCCACCATCCAAGAAACTGCTGCTGTGAGTAAAGAAGAGCCAACTGCTGATATAGCTGCGCAAGAGACTGAGGTCATTGAAGTAGTCAAGGAAAAAGATGTAGCACACTCAGAAACAACGGTCTCTGCTGTTGCTCAGGAGAAGGAATTAGATGTTGTTGTCTCTAATGTTGTCCAGGAGCCAGAGGCTATATTAGTTGGACTCTCCCAGGAGACTGTTGTCCAAGAAACTGAGTCAGCTGCCACGTCTGTTGATGGTGTAGAAACTGAAGCCATTAAGGCTGCCGAGGAAGTCGCAACTGTTGCTGTAAAGGTTGCAGAGGAAATTGCAAACAATGTAGCTCAAATGTCGGAGTCTCTGGCAAACATTGCAATAGAGGCTGAAGCAATAGCAGCTGATGTAGCCAAAGTGGCTGATGCCGTAGTAACCATCACTGAGGAGATGGAAGCAGTAGTCACCAAGGAGGTTGAAGCCATGGAAAGTGAAGTTGTCAAGGATCCAAATGAGGTTGTAGTGGAAACTGCATCTAAAACATCCAAGGTTACTAAAGAGTTCGAAGTGGTAGTGACAGATTTGGTCAAGGAGTCAGAGGGTATTGCTGCAGAGGTTGTTAAGGAGGTCGAACCTGCGACGACTGAGACTGCTGCCAAGGAAGCTGAAGTCCTTTCAACGGAGTCTACCATTGAAACTGAAGCCACAGCTTCAGAAGAAGCCAAGGAGCCTCAGACTACTGCCATTGAGTTTGCCACAGAAGGTCAGACTTTGGCTACAGAGATTGCTGCCAAGGAAGCCAAAGTCACACCTGCAGAGGTTTCCAAGGTAGCTGAAGACCTAACAACCAAGGAGGCTGACACTGGGGCTACAGAAGATGTGAAAATGCTTGAGAATACTGAGGTTGCTGCCAAGGAAGCTGAGGCCATAACAACGAAGGCTGCAGAGGAGGTAGAGACTGTAGTAACTGAAGTCATCGATGAGACGAACTCCGCAGTTGTTTCCAAAATAGAAACCAAGGTTGATACAGAGACTGCAGAGGTGTCCAAGGAAGCCGAAGTCCTAACAACCAAGGAGGCTGACACTGGGGCTACGGAAGATGTGAAACTGCCTGAGAATACTGAGGTTGCTGCCAAGGAAGCTGAGGCCATAACAACGAAGGCTGCAGAGGAGGTAGAGACTGTAGTAACTGAAGTCATCGATGAGACGAACTCAGCAGCTGTTCCCAACATAGAAACCAAGGTTGATTCAGAGACTGTGGTGTCAGAACAGTCTGAAAAACTTGAGAGTCCATCCACCGACAAGTCGGCTGCCTCTCAGACTCCGAGCACCGGAGAAGCAGAACCCAGTCAAACTGAGAAGCCTCTTTCAAATAACCAGAGTGGAGATGAAAACGACAAACCACAAGCCAAGCCTAGTCCAACAAAATGATCACGTGAAAACTTTGATAAAATGCTTTTGTGAATAAAGACCTGTTGGAATAGTTAAACACTTGAGTGTGTAAAACCTTCACCCTATAATGTCTACTCTTCCATCAATGTGTTTGTAACTTAATTACTGTGAATGCCAGCGTTAAGGTAATAGTTTGATTGTGGCCTGTAGGTTTGTAAGCTTTTACTTTTGAGTAAAAGCATGTAACAttctga

Function

symbol description
atad3a Enables identical protein binding activity. Involved in antiviral innate immune response; negative regulation of apoptotic process; and regulation of cell growth. Located in mitochondrion.

NR:

description
PREDICTED: microtubule-associated protein futsch-like

GO: NA

KEGG:

id description
K17681 ATAD3A_B; ATPase family AAA domain-containing protein 3A/B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801879.1 True 3906 mRNA 0.50 16 29812163 29821637

Neighbor

gene id symbol gene type direction distance location
mmp23ba mmp23b coding upstream 60571 29741558 ~ 29751592 (+)
arhgef19 arhgef19 coding upstream 219111 29572007 ~ 29593052 (+)
ddost ddost,LOC102799190 coding upstream 288711 29517679 ~ 29523452 (+)
zbtb17 zbtb17 coding upstream 294973 29502226 ~ 29517190 (+)
hspb7 hspb7 coding upstream 311702 29496591 ~ 29500461 (+)
otud3 otud3 coding downstream 18567 29840204 ~ 29846246 (+)
trim33 trim33 coding downstream 32333 29853970 ~ 29891523 (+)
slc66a1 pqlc2 coding downstream 72368 29894005 ~ 29902494 (+)
nr1h5 LOC100699579,LOC102785665,LOC102209452,LOC102302160,LOC101474965 coding downstream 82222 29903859 ~ 29927978 (+)
angptl7 angptl7 coding downstream 341041 30162678 ~ 30166395 (+)
G54079 mib2,LOC106936770,LOC103150490,LOC106926266 non-coding upstream 40362 29636527 ~ 29771801 (+)
G54108 NA non-coding upstream 46353 29761076 ~ 29765810 (+)
G54107 LOC102235830,LOC104955916,LOC108233146 non-coding upstream 51748 29759044 ~ 29760415 (+)
G54101 ubiad1 non-coding upstream 72919 29737041 ~ 29739244 (+)
G54094 LOC104942893 non-coding upstream 105096 29703248 ~ 29707067 (+)
LOC120558370 NA non-coding downstream 170490 29992127 ~ 29994409 (+)
G54221 NA non-coding downstream 272415 30094052 ~ 30103983 (+)
G54229 NA non-coding downstream 308430 30130067 ~ 30131917 (+)
G54348 ampd1 non-coding downstream 707684 30529321 ~ 30591468 (+)
trnar-ucu_12 NA non-coding downstream 710463 30532100 ~ 30532191 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other upstream 29226 29769852 ~ 29782937 (+)
G54103 LOC103366252 other upstream 54153 29752446 ~ 29758010 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other upstream 244390 29548744 ~ 29567773 (+)
plekhm2 plekhm2 other upstream 266277 29524023 ~ 29545886 (+)
nadka nadk other upstream 488921 29296604 ~ 29323242 (+)
agrn agrn other downstream 392973 30214610 ~ 30486565 (+)
micos10 minos1 other downstream 818123 30639760 ~ 30642621 (+)
G54383 NA other downstream 868015 30689652 ~ 30690404 (+)
LOC120559580 LOC101486775 other downstream 976556 30798193 ~ 30837415 (+)
znf341 NA other downstream 1320633 31142270 ~ 31159511 (+)

Expression


Co-expression Network