xkr7 (xkr7,LOC103148205)


Basic Information

Item Value
gene id xkr7
gene name xkr7,LOC103148205
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6579186 ~ 6683911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802013.1
ctctttctctgtctttctctcctatCCTAACCAACATGGCCGCTAAGTCGGATGGAGCAGCGGTGTCTGTGGAAGATGACAACACGCCCAGGAGCCACTCGGAGCCGGGGATCCCCGCCGCCCGGCCCCGCTGCAGCGCCGCCGGCGGCGGGAAGCCCTACACCCCGCTGGACTGCTGCTGGGTGCTCTGCGCCCTGCTCGTCTTTTTCTCCGACGGCGCGACCGACCTGTGGCTGGCCGCCGACTACTACCTGAGGGGCGACTACTGGTGGTTCGGCTTGACGCTCGTCTTCGTCGTGGTGCCCTCCGCCGTCGTCCAGGTCTTGAGTTTCAGGTGGTTCGTGTACGACTACTCGGAGCTGAGCTGCGGGGACGGAGCAGCGAGCGGCAGCCGCGCGGTGGCGGCAGGCGCGGCATGCGGAGCAACCACGGCGAGCGACAACACTTTAAGCACCAAGGACAGCGAGCAGCGCGGTGGCTGCGCGGCGACGGGGAACGCCGCGAATGCTACCCCGGTTTACACGTCCTCTGCCCCGCCTGCGACGGTCGGGAGAGTAGGGCCCCCCCGGAGGTGCTGCACCGTCTGCATGTGGGTCTTTCAAACCGTGCTTCATGTTCTGCAGCTGGGGCAAGTGTGGAGGTACATCCACGCCCTCTACCTGGGCGCCCAGAGCCGTTTGCATAGCAACGGGCCCCGTCGCCACTTCCACTGGCGGCTGATGTTTGAGAGCGCTGACATCACCATGCTGCGCCTCCTGGAGGCCTTCTTGAAGTCGGCCCCGCAGCTCGTCCTCCAGCTGAGCATCATGATCCACGGAAACACCGTCCTCCCTCTGCAGGGTCTCTCGGCCTCGGCCTCCCTGGTCTCTCTTGCCTGGATGATCGCCTCCTACCAGAAGGTTCTCCGGGACTCCCGCGACGACAAGCTGCCCATGTCCTACAAGGCCGTGATCACCCAGATGCTGTGGCACTTCTTCACCATCGGGGCGCGGACCGTGGCCTTTGCCCTCTTCGCCTCCGTCTTCCAGCTCTACTTCGGCATATTCATCGTCAGCCACTGGTGTGTCATGACATTCTGGATCATCCAAGGTGAGACCGACTTCTGCATGTCCAAGTGGGAGGAGATCATCTACAACATGGTGGTGGGCATCATCTACATCTTCTGCTGGTTCAATGTCAAGGAGGGCCCCAGCCGTTTCCGCATGACCGTCTACTACTCCGTGACACTGGCCGAGAACGTGGCGCTGACCGCCGCCTGGTACACCTACCGCGGCCCGCCCACCTCCGACTCCTACGCCGTAGTGGTGGTGTGCCTGGTGGCCTGCAGCTTTGCCCTGGGAACCTTCTTCATGCTGGTGTACTACTGCTGGCTGCACCCTGACGGGCCGGTTCTGGGCTCACAGTGGGGAGGCTGTGTGGATGAGGGTGTGGTGGGTGCGGGAGGGGTAGTGGGAGTGATTGACGCTTGCCTCACTCCATCCCAAGGGTCCCAAACGGACATGGTCATTACCAGCCCTCCGAGGACTCTCCCCAGGACTAAAGACACGGGGGAGCCGGTTCCCGGGGAGCGAGACAAGGACAGAGACAGGGACAGTTGCCTGCCCGTGTTCCAGGTTCGTCCCTCTCCTTCATCCTCACCTGCATTCCTTCACAGGACCTCATCGTCATCCCGCGCACAGGAGGGCCCAGTGATCCGGATCGACCTGCCGAGGAAGCGATACCCAGCCTGGGATGCGCACTTTATCGATCGCCGCCTCCGCAAGACCATTCTGCTTCTGGAGACCACGTCAGCCGTCAGCCCCAGGATTCAGTACAGGAGTAGCATGATGGGCAGCAAAGAGGTATTAGAATATGAAACAACTGTCTAAGCCAAAAAGggattttaaatttaaaggtgcagtcTGGAACCAAGGCTCAGCCTGAGATCAGTTCTCATCCCAGGACTACCTACGCCAGGAGAAACATGGAAAGGAGACACCGAGTGTCAGCCAACTCTAAAAAAAAACGAGGTTGTCAAAACTTGATTGTAAAATGTGAAGCGCAATCTGGGACCAAAGCTCTCCCCTTAGGGCGCAGTCCAGGAGTACGTAGCATGAATGAGCCGTGGGAAGTTAATGGAGTAACACTGAACTGGGATAATCTTCGTCTTTTCTAAAATGCTTGGAGCTGAGAAATGTAATTTCTCATCCTGGGACCAAGGAGTGTTAGATTTAGTTTCATCCTGCATGGTCAGAACAGGAAGTAAAAGGATTTGAGAGCGAGGAAGTCGCGGAGTTTGAGATAATTGAGAAACAGTCTGCTGCATGAACTTGAGACTTGGACCCCGGAGACTCAACAAAGACTTAACAGGGAACTTTTAAAGACTGGAGTTTGCACGGGACATGCAATCTTTTGGTTTGGTAGCAAATTAGACACTGCAGAGAATGGAGACTATCTAATAAATATTGCATAAGGGATTTTCTTTTGAGGGCAAAAAATAACTTGATGCCTCAGTTAAAACTGAGTTAAATTTGGCTGAaaaatgatgtttttgttggtttttaaaTCTAGATTACAtacaggggcgattctaggatcagacctttagggggactcagcccctaatgagaatgtgac

Function

symbol description
xkr7 Predicted to be involved in apoptotic process involved in development; engulfment of apoptotic cell; and phosphatidylserine exposure on apoptotic cell surface. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human XKR7 (XK related 7).

NR:

description
PREDICTED: XK-related protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802013.1 True 2616 mRNA 0.57 4 6579186 6683911

Neighbor

gene id symbol gene type direction distance location
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding upstream 77006 6493569 ~ 6502180 (+)
rgs19 LOC103373111 coding upstream 185684 6346108 ~ 6393502 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding upstream 306506 6262023 ~ 6272680 (+)
oprl1 oprl1 coding upstream 344343 6063850 ~ 6234843 (+)
npbwr2b LOC103358254,LOC104941021 coding upstream 828954 5747209 ~ 5750232 (+)
cables2b LOC101464377,LOC102312634,LOC102204736,LOC100701228 coding downstream 45791 6729702 ~ 6774102 (+)
LOC120558797 NA coding downstream 171266 6855177 ~ 6863948 (+)
LOC120558795 NA coding downstream 185668 6869579 ~ 6934548 (+)
LOC120558791 NA coding downstream 343166 7027077 ~ 7066173 (+)
LOC120558603 NA coding downstream 442713 7126624 ~ 7135842 (+)
G47482 NA non-coding upstream 151188 6427468 ~ 6427998 (+)
G47460 NA non-coding upstream 324612 6242925 ~ 6254574 (+)
G47441 NA non-coding upstream 342360 6236194 ~ 6236826 (+)
G47428 NA non-coding upstream 722188 5856565 ~ 5856998 (+)
G47423 NA non-coding upstream 817105 5761869 ~ 5762081 (+)
G47508 NA non-coding downstream 38828 6722739 ~ 6725198 (+)
G47516 NA non-coding downstream 149260 6833171 ~ 6915980 (+)
G47517 NA non-coding downstream 162137 6846048 ~ 7305481 (+)
LOC120558815 NA non-coding downstream 187782 6871693 ~ 6889136 (+)
G47522 NA non-coding downstream 190598 6874509 ~ 6875118 (+)
G47444 NA other upstream 378592 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 1803828 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 2713388 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3064428 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 3274549 3279361 ~ 3304637 (+)
ccm2l ccm2l,LOC102778549 other downstream 14082 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 1428530 8112441 ~ 8116228 (+)
pkig pkig other downstream 1658839 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1794212 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1970501 8654412 ~ 8662891 (+)

Expression


Co-expression Network