LOC120558804


Basic Information

Item Value
gene id LOC120558804
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6979556 ~ 6981039 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639187.1
GCTGTTCTTCTACAAAAGAGGACTAATCACTCTGATGGTTCAAACCAGAGAGGAAACACAGACATCACCAGGACTGAGATTAACATCTATGAGAACTGCCCTCCACTCTCCACCCGTGCAGACTCCACCTACCAGAGTCTGGATCCAGCCTCCAGGGATCCAGACCACATCTACTCTACTCTCTCTTAGATACAACACCTATGATGATGTCAGCAAGAGTTTCTGCTGAATGCACAGCGAAGCTTGGCTGCTGCTCATGGCAGTGAAGGATTTTATTACCAACCAGAAGCGTTTCTAGGACTTGAGGAGGTTCAGGACTTAGCCCGGAcccatttaaaggaacacgccgacttattgggactttagcttattcaccgtatcccccagagttagacagagtagaagtccatacatacccttctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639187.1 True 424 lncRNA 0.48 3 6979556 6981039

Neighbor

gene id symbol gene type direction distance location
LOC120558795 NA coding upstream 45008 6869579 ~ 6934548 (+)
LOC120558797 NA coding upstream 115608 6855177 ~ 6863948 (+)
cables2b LOC101464377,LOC102312634,LOC102204736,LOC100701228 coding upstream 205454 6729702 ~ 6774102 (+)
xkr7 xkr7,LOC103148205 coding upstream 295645 6579186 ~ 6683911 (+)
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding upstream 477376 6493569 ~ 6502180 (+)
LOC120558791 NA coding downstream 46038 7027077 ~ 7066173 (+)
LOC120558603 NA coding downstream 145585 7126624 ~ 7135842 (+)
LOC120558799 NA coding downstream 162749 7143788 ~ 7149386 (+)
LOC120558604 NA coding downstream 191322 7172361 ~ 7180197 (+)
LOC120558794 NA coding downstream 280663 7261702 ~ 7266435 (+)
G47531 NA non-coding upstream 11885 6963692 ~ 6967671 (+)
G47516 NA non-coding upstream 63576 6833171 ~ 6915980 (+)
LOC120558815 NA non-coding upstream 90420 6871693 ~ 6889136 (+)
G47522 NA non-coding upstream 104438 6874509 ~ 6875118 (+)
G47508 NA non-coding upstream 254358 6722739 ~ 6725198 (+)
G47536 NA non-coding downstream 376 6981415 ~ 7138886 (+)
LOC120558806 NA non-coding downstream 9696 6990735 ~ 6993172 (+)
LOC120558814 NA non-coding downstream 19512 7000551 ~ 7001713 (+)
G47543 NA non-coding downstream 81028 7062067 ~ 7063606 (+)
LOC120558802 NA non-coding downstream 101842 7082881 ~ 7083074 (+)
ccm2l ccm2l,LOC102778549 other upstream 258624 6697993 ~ 6720932 (+)
G47444 NA other upstream 778962 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 2204198 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 3113758 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3464798 3448104 ~ 3514758 (+)
G47903 LOC104965021 other downstream 1131402 8112441 ~ 8116228 (+)
pkig pkig other downstream 1361711 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1497084 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1673373 8654412 ~ 8662891 (+)
G48077 NA other downstream 1699243 8680282 ~ 8687964 (+)

Expression


Co-expression Network