LOC120559193


Basic Information

Item Value
gene id LOC120559193
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10544009 ~ 10560240 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639230.1
GATGACGAGGCACCGTTGGACGTAGGCCGAGTTTCAGCTTGAGTGGGAGGCGGTGGAGGGGCGGTTTTAGCTGAAAATGCAGTTTTTAGACAGAAtcctgtaaaacaaaaaaagcccgGCCGTGCATCCTTAAGACAACAGGCATGTCCTACCTTGATGTTGTACTCCCAAAGCATCCTCAAGAAGTCCAGTACTGTGTGAGGCAGAGGACCCTGAGTAGCAATGTAGGCCTTGGAACCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639230.1 True 243 lncRNA 0.51 3 10544009 10560240

Neighbor

gene id symbol gene type direction distance location
LOC120559190 LOC103365742 coding upstream 3657 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 17675 10326748 ~ 10526334 (+)
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 227373 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 255869 10163002 ~ 10288140 (+)
pink1 pink1 coding upstream 412755 10118685 ~ 10131254 (+)
LOC120559192 NA coding downstream 14361 10574601 ~ 10583529 (+)
LOC120558406 NA coding downstream 33544 10593784 ~ 10747553 (+)
LOC120558407 NA coding downstream 198157 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 757190 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 792374 11352614 ~ 11382149 (+)
G48602 NA non-coding upstream 1083 10511822 ~ 10542926 (+)
G48594 NA non-coding upstream 139250 10404052 ~ 10404759 (+)
G48507 NA non-coding upstream 529626 10010836 ~ 10014383 (+)
G48481 NA non-coding upstream 623201 9920048 ~ 9920808 (+)
G48415 LOC103359731 non-coding upstream 739663 9803739 ~ 9804346 (+)
G48639 NA non-coding downstream 25919 10586159 ~ 10586543 (+)
LOC120558408 NA non-coding downstream 76236 10636476 ~ 10637645 (+)
G48648 NA non-coding downstream 151472 10711712 ~ 10774796 (+)
G48670 NA non-coding downstream 295262 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding downstream 307618 10867858 ~ 10871077 (+)
agmat agmat,LOC102790280 other upstream 392758 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 618928 9922600 ~ 9925081 (+)
G48347 NA other upstream 1114062 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1422097 8990487 ~ 9121912 (+)
G48162 NA other upstream 1817457 8716767 ~ 8726552 (+)
G48640 NA other downstream 53791 10614031 ~ 10750428 (+)
G48752 NA other downstream 612355 11172595 ~ 11173654 (+)
G48765 NA other downstream 754422 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1524212 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1532539 12092779 ~ 12103899 (+)

Expression


Co-expression Network