LOC120559422


Basic Information

Item Value
gene id LOC120559422
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2976616 ~ 2977694 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639261.1
AGACTGACTAAATCACTATATGTGATGCTGTATTGcaggagaccagtgaagatccAGTTGGAGTGGTGCTGATCACACAGCTGGAGTGGTCTTTCAGCAGGGCTCTGAAGCAGTTTCCCGGTCCCAGCGGTCCCAGCACACAGCTGCTACCAGAGGCAGTCTTTCATGGATACAGGAGGAGTCTCTGAGCCGGTCTACAGTGTAGCGGATTGGGTCAGACATCCTGgttcaataacaacaacaacaacaacatcatcatcatcatcatcatcatcatcatcatcaagcagcagcagcagcagcagccgcatcagcagctgcagcagaaaaaGATGACCAGGAACTGTTTAGCCTACAGTCAGCTGAAGTCGTAGATTGAGTCAGAGGAGATGACGAACAGGAAGTCAGCAGTGCAGCTTCCAACAGGTCGTCTGTGCAGGTTCTTTCATCAACCCCTAAAGCAGGGCCCTGACAGCCCTCACGTACATGACAGCTTCCCCGGGGTACCAGGGAAATACATCTACTGCCCCTCCAGAGTGTTCTCCCCCTACAAGGCACAGGGCATGGGGAAGGAGATGACCTGGGGGGAGTTCAAACTGTCAACCTCACATAGTCTCTCAGCACCTTTACATGCACTCTAGTGTTCCCTCTacgtgtgtaaatgtgtaatattttaataataaattattcCGTAAATGTATACCCATATTtagttgttaatttgttttatatataacaTTTGAATTATATAAATAAGCAATGTGTCaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639261.1 True 768 lncRNA 0.47 2 2976616 2977694

Neighbor

gene id symbol gene type direction distance location
LOC120558536 NA coding upstream 149904 2825257 ~ 2826712 (+)
LOC120558526 NA coding upstream 219569 2753513 ~ 2757047 (+)
LOC120559413 NA coding upstream 314274 2661572 ~ 2662342 (+)
LOC120558523 NA coding upstream 329149 2645892 ~ 2647467 (+)
LOC120558519 NA coding upstream 425892 2548939 ~ 2550724 (+)
LOC120559389 NA coding downstream 200603 3178297 ~ 3185180 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 748267 3725961 ~ 3734391 (+)
LOC120558400 NA coding downstream 980862 3958556 ~ 3982281 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 1027571 4005265 ~ 4014601 (+)
mfn2 mfn2 coding downstream 1052829 4030523 ~ 4059713 (+)
LOC120559417 NA non-coding upstream 1046 2974854 ~ 2975570 (+)
LOC120559432 NA non-coding upstream 96874 2879162 ~ 2879742 (+)
G46577 NA non-coding upstream 114794 2663906 ~ 2861822 (+)
LOC120559439 NA non-coding upstream 120436 2855557 ~ 2856180 (+)
LOC120559425 NA non-coding upstream 330862 2637964 ~ 2645754 (+)
LOC120559441 NA non-coding downstream 41117 3018811 ~ 3035935 (+)
G46555 LOC104948352 non-coding downstream 63779 3041473 ~ 3253531 (+)
LOC120559445 NA non-coding downstream 682896 3660590 ~ 3661927 (+)
LOC120559446 NA non-coding downstream 728911 3706605 ~ 3719155 (+)
G46996 NA non-coding downstream 889457 3867151 ~ 3870238 (+)
G46574 NA other upstream 206163 2745898 ~ 2770453 (+)
G46530 NA other upstream 586104 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 637187 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 743957 2205341 ~ 2232659 (+)
G46328 NA other upstream 1338446 1635948 ~ 1638170 (+)
LOC120559392 NA other downstream 168787 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 301667 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 470410 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 865370 3843064 ~ 3865798 (+)
LOC120559501 NA other downstream 1795238 4772932 ~ 4775358 (+)

Expression


Co-expression Network