LOC120559436


Basic Information

Item Value
gene id LOC120559436
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2282124 ~ 2288627 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639278.1
ACTTGAAGGATCTTGGAGCGCTTTCAACACGCTTTGATAAACTATAAAGACTGGACATTTTCTATCAGTGACAGTCATCagcttgtttttcttctctgtcAGCCAATCATGACCTGAGCAAAGATGGCATCAGGCTTTCTGTTTGCTTTGTTGCCGTTTGTCTATTGGACCGTCGGCTGCATCTCTACAGATCTTCAACCCCCTATCATGGTCACTCCTGCTCATATAGATGTAGGTTAAAGCTTTGGTGTAGCGCAGCCTCCAAATGAAACAAAAGACTcaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639278.1 True 285 lncRNA 0.44 3 2282124 2288627

Neighbor

gene id symbol gene type direction distance location
LOC120558473 LOC103372586 coding upstream 673679 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1229114 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 1236885 1015388 ~ 1045239 (+)
trim101 NA coding upstream 1271287 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 1295853 938976 ~ 986271 (+)
LOC120559387 NA coding downstream 124944 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 260312 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 357265 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 372945 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 464886 2753513 ~ 2757047 (+)
G46492 NA non-coding upstream 5538 2276265 ~ 2276586 (+)
G46490 NA non-coding upstream 20014 2261791 ~ 2262110 (+)
G46488 NA non-coding upstream 26267 2255337 ~ 2255857 (+)
G46485 NA non-coding upstream 28383 2253086 ~ 2253741 (+)
LOC120559434 NA non-coding upstream 250051 2030045 ~ 2032073 (+)
G46501 NA non-coding downstream 13319 2301946 ~ 2302218 (+)
G46511 NA non-coding downstream 32710 2321337 ~ 2322029 (+)
G46523 NA non-coding downstream 55834 2344461 ~ 2347557 (+)
G46558 NA non-coding downstream 277097 2565724 ~ 2566315 (+)
G46564 NA non-coding downstream 314571 2603198 ~ 2604255 (+)
LOC120559409 NA other upstream 49465 2205341 ~ 2232659 (+)
G46328 NA other upstream 643954 1635948 ~ 1638170 (+)
G46305 NA other upstream 758893 1522685 ~ 1523231 (+)
G46238 NA other upstream 997745 1277288 ~ 1284379 (+)
LOC120559832 rps21 other upstream 1034353 1236315 ~ 1247771 (+)
LOC120558501 NA other downstream 48709 2337336 ~ 2339429 (+)
G46530 NA other downstream 101319 2389946 ~ 2390512 (+)
G46574 NA other downstream 457271 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 857854 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 990734 3279361 ~ 3304637 (+)

Expression


Co-expression Network