LOC120559438


Basic Information

Item Value
gene id LOC120559438
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 1849055 ~ 1851198 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639280.1
TTGGCTGCGTGCAGGATTAATTCTACAGCAGCCATATGTTGTCTCCTTCACGAAAAAGATCCTATTTGAACAGCATACACAATCAAATGCTTTATAGTGggcATGGATGAAGACGCCATCAACGAGGCCACTGAAGAAACCAGTGTTGGGACATGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639280.1 True 159 lncRNA 0.46 3 1849055 1851198

Neighbor

gene id symbol gene type direction distance location
LOC120558473 LOC103372586 coding upstream 240610 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 796045 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 803816 1015388 ~ 1045239 (+)
trim101 NA coding upstream 838218 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 862784 938976 ~ 986271 (+)
LOC120559387 NA coding downstream 562373 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 697741 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 794694 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 810374 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 902315 2753513 ~ 2757047 (+)
G46380 NA non-coding upstream 10234 1837732 ~ 1838821 (+)
G46378 NA non-coding upstream 30147 1799916 ~ 1818908 (+)
G46352 NA non-coding upstream 110810 1736325 ~ 1738245 (+)
LOC120559419 NA non-coding upstream 150765 1697613 ~ 1698290 (+)
LOC120559418 NA non-coding upstream 151440 1696242 ~ 1697615 (+)
G46383 NA non-coding downstream 25514 1876712 ~ 1876982 (+)
LOC120559429 NA non-coding downstream 51366 1902564 ~ 1903378 (+)
LOC120559434 NA non-coding downstream 178847 2030045 ~ 2032073 (+)
G46485 NA non-coding downstream 401888 2253086 ~ 2253741 (+)
G46488 NA non-coding downstream 404139 2255337 ~ 2255857 (+)
G46328 NA other upstream 210885 1635948 ~ 1638170 (+)
G46305 NA other upstream 325824 1522685 ~ 1523231 (+)
G46238 NA other upstream 564676 1277288 ~ 1284379 (+)
LOC120559832 rps21 other upstream 601284 1236315 ~ 1247771 (+)
G46066 ppdpf,LOC106937393,LOC103148182,LOC103356003 other upstream 948759 793902 ~ 900296 (+)
LOC120559409 NA other downstream 354143 2205341 ~ 2232659 (+)
LOC120558501 NA other downstream 486138 2337336 ~ 2339429 (+)
G46530 NA other downstream 538748 2389946 ~ 2390512 (+)
G46574 NA other downstream 894700 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 1295283 3146481 ~ 3288089 (+)

Expression


Co-expression Network