LOC120559441


Basic Information

Item Value
gene id LOC120559441
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3018811 ~ 3035935 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639283.1
CCTCGGAGCTGGAAGACCGTTGCATCGATCGTGGAGAGACCAGAGATATTGAGTTCTAGCTAGTAGTGAGTGGAGTTGAAAAGGGTCTGACCACCGTGGCAGGTGTTTCCAAGTGTTACAATGCCTGAAACAGTGATGGATGCCATCACAGCAGCGCTCCCAAGGCTCGATGAGGATCGTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639283.1 True 184 lncRNA 0.52 3 3018811 3035935

Neighbor

gene id symbol gene type direction distance location
LOC120558536 NA coding upstream 192099 2825257 ~ 2826712 (+)
LOC120558526 NA coding upstream 261764 2753513 ~ 2757047 (+)
LOC120559413 NA coding upstream 356469 2661572 ~ 2662342 (+)
LOC120558523 NA coding upstream 371344 2645892 ~ 2647467 (+)
LOC120558519 NA coding upstream 468087 2548939 ~ 2550724 (+)
LOC120559389 NA coding downstream 142362 3178297 ~ 3185180 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 690026 3725961 ~ 3734391 (+)
LOC120558400 NA coding downstream 922621 3958556 ~ 3982281 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 969330 4005265 ~ 4014601 (+)
mfn2 mfn2 coding downstream 994588 4030523 ~ 4059713 (+)
LOC120559422 NA non-coding upstream 41117 2976616 ~ 2977694 (+)
LOC120559417 NA non-coding upstream 43241 2974854 ~ 2975570 (+)
LOC120559432 NA non-coding upstream 139069 2879162 ~ 2879742 (+)
G46577 NA non-coding upstream 156989 2663906 ~ 2861822 (+)
LOC120559439 NA non-coding upstream 162631 2855557 ~ 2856180 (+)
G46555 LOC104948352 non-coding downstream 5538 3041473 ~ 3253531 (+)
LOC120559445 NA non-coding downstream 624655 3660590 ~ 3661927 (+)
LOC120559446 NA non-coding downstream 670670 3706605 ~ 3719155 (+)
G46996 NA non-coding downstream 831216 3867151 ~ 3870238 (+)
G46997 NA non-coding downstream 834440 3870375 ~ 3872139 (+)
G46574 NA other upstream 248358 2745898 ~ 2770453 (+)
G46530 NA other upstream 628299 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 679382 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 786152 2205341 ~ 2232659 (+)
G46328 NA other upstream 1380641 1635948 ~ 1638170 (+)
LOC120559392 NA other downstream 110546 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 243426 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 412169 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 807129 3843064 ~ 3865798 (+)
LOC120559501 NA other downstream 1736997 4772932 ~ 4775358 (+)

Expression


Co-expression Network