Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120559475 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 9301354 ~ 9345114 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005639287.1 | True | 734 | lncRNA | 0.50 | 6 | 9301354 | 9345114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120558451 | LOC100703402 | coding | upstream | 65338 | 9234160 ~ 9236016 (+) |
| pfdn4 | pfdn4 | coding | upstream | 90795 | 9200752 ~ 9210559 (+) |
| LOC120559286 | NA | coding | upstream | 647038 | 8645778 ~ 8654316 (+) |
| itih6 | itih6 | coding | upstream | 668529 | 8605863 ~ 8632825 (+) |
| LOC120559288 | NA | coding | upstream | 731023 | 8569081 ~ 8570331 (+) |
| cd40 | NA | coding | downstream | 12858 | 9357972 ~ 9366078 (+) |
| zbtb48 | LOC102780700 | coding | downstream | 190293 | 9535407 ~ 9544237 (+) |
| syt6a | syt6,LOC103150978,LOC106928401,LOC103467834 | coding | downstream | 252512 | 9597626 ~ 9689330 (+) |
| sdf4 | sdf4 | coding | downstream | 408955 | 9754069 ~ 9761924 (+) |
| LOC120559338 | NA | coding | downstream | 556876 | 9901990 ~ 9904443 (+) |
| G48310 | NA | non-coding | upstream | 13692 | 9287059 ~ 9287662 (+) |
| G48294 | NA | non-coding | upstream | 45069 | 9243354 ~ 9256285 (+) |
| G48269 | NA | non-coding | upstream | 109145 | 9189378 ~ 9192209 (+) |
| G48264 | NA | non-coding | upstream | 118206 | 9180563 ~ 9183148 (+) |
| G48259 | NA | non-coding | upstream | 174340 | 9126810 ~ 9127014 (+) |
| G48338 | NA | non-coding | downstream | 22771 | 9367885 ~ 9381444 (+) |
| G48369 | NA | non-coding | downstream | 175644 | 9520758 ~ 9521651 (+) |
| G48365 | klhl21 | non-coding | downstream | 200960 | 9546074 ~ 9550823 (+) |
| G48381 | NA | non-coding | downstream | 250946 | 9596060 ~ 9596433 (+) |
| G48396 | NA | non-coding | downstream | 377049 | 9722163 ~ 9726205 (+) |
| LOC120559255 | tshz2 | other | upstream | 179442 | 8990487 ~ 9121912 (+) |
| G48162 | NA | other | upstream | 574802 | 8716767 ~ 8726552 (+) |
| G48077 | NA | other | upstream | 613390 | 8680282 ~ 8687964 (+) |
| LOC120559293 | pifo | other | upstream | 638463 | 8654412 ~ 8662891 (+) |
| LOC120559763 | NA | other | upstream | 803960 | 8478123 ~ 8497394 (+) |
| G48347 | NA | other | downstream | 59110 | 9404224 ~ 9429947 (+) |
| ubxn10 | NA | other | downstream | 577486 | 9922600 ~ 9925081 (+) |
| agmat | agmat,LOC102790280 | other | downstream | 794484 | 10139598 ~ 10151251 (+) |
| G48640 | NA | other | downstream | 1268917 | 10614031 ~ 10750428 (+) |
| G48752 | NA | other | downstream | 1827481 | 11172595 ~ 11173654 (+) |
