LOC120559927


Basic Information

Item Value
gene id LOC120559927
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14852396 ~ 14852469 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639382.1
TCTTCAGTGATGATTTATACAGTGACTTTCGTTCTTCTGAGCCTAGTGAAGCCAGCCTTTCTGTCCTGAGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639382.1 True 74 snoRNA 0.43 1 14852396 14852469

Neighbor

gene id symbol gene type direction distance location
prim1 prim1 coding upstream 8084 14839358 ~ 14844312 (+)
LOC120559093 cacnb3,LOC102792394,LOC106525262,LOC103467623,LOC107090276,LOC100704754,LOC102209744 coding upstream 47278 14781236 ~ 14805118 (+)
LOC120558822 NA coding upstream 146709 14703693 ~ 14705687 (+)
LOC120559695 LOC103358635,LOC104952763,LOC102794158,LOC101484659 coding upstream 168386 14676272 ~ 14684010 (+)
LOC120559203 LOC102794447,LOC101484947 coding upstream 180394 14620148 ~ 14672002 (+)
LOC120559926 NA coding downstream 1085 14853554 ~ 14853627 (+)
LOC120558671 ptges3,LOC102790477 coding downstream 10043 14862512 ~ 14867023 (+)
baz2a baz2a,LOC102790184 coding downstream 16439 14868908 ~ 14888131 (+)
LOC120559525 LOC107391160,LOC103467615,LOC107090264,LOC102789905,LOC104951673 coding downstream 39588 14892057 ~ 14898107 (+)
mipb mip,LOC100706349,LOC103373044,LOC102789611 coding downstream 48181 14900650 ~ 14902525 (+)
G49778 LOC102302837,LOC101485799,LOC100702507,LOC103358639,LOC104919652,LOC103385584,LOC106524244 non-coding upstream 261620 14585449 ~ 14590776 (+)
G49775 LOC107731244 non-coding upstream 282799 14568325 ~ 14569597 (+)
G49764 NA non-coding upstream 300837 14551310 ~ 14551559 (+)
G49762 NA non-coding upstream 305301 14546864 ~ 14547095 (+)
G49761 NA non-coding upstream 305674 14545395 ~ 14546722 (+)
G49883 NA non-coding downstream 50447 14902916 ~ 14970803 (+)
LOC120559279 NA non-coding downstream 355273 15207742 ~ 15241127 (+)
G50002 NA non-coding downstream 423644 15276113 ~ 15276360 (+)
G50003 NA non-coding downstream 424977 15277446 ~ 15277646 (+)
G50014 NA non-coding downstream 569850 15422319 ~ 15422608 (+)
G49776 NA other upstream 274824 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 284940 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 624508 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 731374 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 1127406 13658732 ~ 13724990 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 919748 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 923748 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 1033521 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 1451843 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 1470352 16322821 ~ 16379645 (+)

Expression


Co-expression Network