G68882


Basic Information

Item Value
gene id G68882
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41660768 ~ 41701471 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU92252
AAGTTGTGTACCTTATTCAGTGTCAAATATTCCACATATTAGAAGCATAAATTAAGAGTCTCCCAACCTGGGTCTCATAGCTGTCAACCATTTGATGACATTGTCCAGGCTGATTGCGTTCTCCAGCGTTGTCATGACTTCAGGCAACATCAGCAGCATGGAGTAGGAGCTGTTTAAGGGGAGCTGAAGGACTGTAGTCTTCAGCTTGTCGTCGTGATAGGTGTAGAAACTATCCTCCAGATTCATCATGAAGACTGGAACCTTGTGTTCTCGTCCATGTTGAAGTCGTCCTGCTCAGTGAGCTCAGGGTCAAACTGAGTTGCCCACTTTCCTTACCTTTGTAGTAGATGTAGCTGATGAGATACATgactgtgtttggatccaggtCTTCCACCAACTGGTCAATCCTCCCATTGGTCATCTTCTCCTCCATGTACTTATTAATGGTATCAGCACTTTCTGTGGTTTGGCTGAAATCCACATTGAACCCATCTGTGAAGTAAGACTGCTTCAGGGTCTGCAGGAACTCCGGCTTGGGCTTGAAGCGGTCGTCCATGAACATGGCAGTCCCTTCACTGGAGTCCTCCTGAGATTGGTTGTTGGCCCTCTGGAGGAACATCTGGAAGGCCTGGTCCACCTCTTTCTGCACCAGGGAGTTGTTGAAGCCCAGACCACTGAAAAGCTGACGGTGCGTCTCCCCCTGCGCTCCCACTGACAACGCAGCCAAAGCGGTTGACACACAAAATGGGCAGAAGATGATATTCTCTCCCTGTGAGTCAGCATGAGCTGCTAACTGCCTGTAGAGTCTGAAGGAAAATTCTTGGTTTGCTTCGTTCACCAGGGCGACGCTGTCGGTACGGTCGTCAACTACAGCGTCTTTGACTGTCTTGACGTTGCCGTGAACAAAATAGTGATGTCCTCTGCCCACGTAGATCACCGCTGATAGGACCCAGAGACCCACGGCTGCATGCATCATCACTGTGAACTAAGACAAAAGTTCAAAAGTTCAGCTTCATTGTTTT
>TU92256
GTTTTTAACTCACTGACAGACAATTCAGTGTCAAACCTTTCACATAATAGAAGCATAAATTAAGATGCTCCCAACCTGGGCTTCATCCACTGCAACCATTTGGTGACACGGTGCGGGCCAATGGCGTTCTCCAGTGTTTCCATGACGTCAGGCAACATCAGCAGCATGGAGTAGGAGCTGGTGAAGGGGAGCTGAAGGACCGTCGCGTTCAGCACATTGTCGCGATATGTGTAGAAACTATCCTCCAGATTCATCATGAGGACTTTGACCTGGACAATGACAATTTAAACACCGAAGGAACGATGATGCTTAATTGGACTTGGATGCAAATCCATGCATccttttgtcaaaaaaaaaaaaaaaaaaaaagggtgttaCAACTATCAGGTTTTCCCAAATTGTGTTAACGGCATGAAAAATACTTTATAAATCTTTGGTAAATGAATTACCCAGGGACCCTCGCACTAGGTTTAGGCTTAACCATGAATGTTCAAGATGTCAATTACTGGGACTCAAGTCattttttctaaaataaaaaaagagaatctCTGAACCTTTGTGTTCTCGTCCACGTTGAAGTAATCTTCCTCTGTGAGCTCAGGGTCAAACTGAGTCGCCCACTTCCTTTGTAGTAGATGTAGCTGATGAGATACATgactgtgtttggatccaggtTTTCCACCAGCTGGTCAATCTTCCCGTTGGTCTTCCCCTCCACGTACTTATTGATGGTATCAGCACTTTCTGTGGCGTTGGTGAAGTCCACATTGAACACATCTGTGAAGTAGGACTGCTTCAGGGTCTGCAGGAACTCTAGCTTTAACTTGAAGCGGTTGTCCACGAACACTGCGGTCCCGTTGCTGGCATCCTCCTGAGATGGGTTGTTGGCCCTCTGGAGGAACGTCTGGAAGGCCTGGTCCATATCTGTCTGTGTCAGGAGGGAGCTGTTGAAACCCAGACCACTGAAAAGCTGACGGTGAGTCTCCCCCTGCGCTCCCACGGACAACGCAGCCAAGGCGGCCGACACACTAGCCGGGGAGAAGAAGGTATTCTTTCCCTGTGAGTCAGCATGAGCTGCTAACTGCCTGTAGAGTCGGAAGGAAAACTCTTTGTTTGCTTCGTTCACCAGGGAGACGC
>TU92257
AAGTTGTGTACCTTATTCAGTGTCAAATATTCCACATATTAGAAGCATAAATTAAGAGTCTCCCAACCTGGGTCTCATAGCTGTCAACCATTTGATGACATTGTCCAGGCTGATTGCGTTCTCCAGCGTTGTCATGACTTCAGGCAACATCAGCAGCATGGAGTAGGAGCTGTTTAAGGGGAGCTGAAGGACTGTAGTCTTCAGCTTGTCGTCGTGATAGGTGTAGAAACTATCCTCCAGATTCATCATGAAGACTGGAACCTTGTGTTCTCGTCCATGTTGAAGTCGTCCTGCTCAGTGAGCTCAGGGTCAAACTGAGTTGCCCACTTTCCTTACCTTTGTAGTAGATGTAGCTGATGAGATACATgactgtgtttggatccaggtCTTCCACCAACTGGTCAATCCTCCCATTGGTCATCTTCTCCTCCATGTACTTATTGATGGTATCAGCACTTTCTGTGGTTTGGTTAAAGTCCACATTGAACCCATCTGTGAAGTACGACTGCTTCAGGGTCTGCAGGAACTCTGGCTTCGGCTTGAAGTCGTCGTCCACGAACACAGCGGTCCCTTCGCTGGCGTCCTCCTGAGATGTGTTGTTGGCCCTCTGGAGGAACGTCTGGAAGGCCTGGTCCACATCTGTCTGCGTCAGGAGGGAGCTGTTGAAGCCCAGACCACTGAAAAGCTGAAGGTGAGTCTCCCCCTGCGCTCCCACGGACAACGCAGCCAAGGCGGCCGACACACTAGCCGGGGAGAAGAAGGTATTCTTTCCCTGTGAGTCAGCATGAGCTGCTAACTGCCTGTAGAGTCGGAAGGAAAACTCTTTGTTTGCTTCGTTCACCAGGGAGACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92252 False 1022 lncRNA 0.49 3 41700054 41701471
TU92256 True 1137 lncRNA 0.47 3 41660768 41678987
TU92257 False 852 lncRNA 0.50 4 41660768 41701471

Neighbor

gene id symbol gene type direction distance location
bag4 NA coding downstream 63858 41588921 ~ 41596910 (-)
LOC120560239 LOC104917865,LOC103367618,LOC107092737,LOC102234380 coding downstream 78416 41572144 ~ 41582352 (-)
LOC120561099 NA coding downstream 111864 41537525 ~ 41548904 (-)
LOC120560202 NA coding downstream 147309 41501112 ~ 41513459 (-)
LOC120560221 NA coding downstream 164539 41488629 ~ 41496229 (-)
pold2 pold2 coding upstream 94790 41796261 ~ 41815906 (-)
LOC120561103 NA coding upstream 136155 41837626 ~ 41858498 (-)
LOC120561104 NA coding upstream 165768 41867239 ~ 41882013 (-)
LOC120561107 rictor coding upstream 237510 41938981 ~ 42022357 (-)
LOC120561108 NA coding upstream 332752 42034223 ~ 42047509 (-)
LOC120560256 NA non-coding downstream 31890 41627519 ~ 41628878 (-)
G69032 NA non-coding downstream 61814 41582510 ~ 41598954 (-)
G69034 NA non-coding downstream 69891 41590242 ~ 41590877 (-)
G68911 NA non-coding downstream 108026 41484057 ~ 41552742 (-)
LOC120560253 NA non-coding downstream 138279 41520570 ~ 41522489 (-)
G69058 NA non-coding upstream 31898 41733369 ~ 41733800 (-)
G69062 NA non-coding upstream 41967 41743438 ~ 41744488 (-)
G68922 NA non-coding upstream 47663 41749134 ~ 41859512 (-)
G68917 NA non-coding upstream 65532 41767003 ~ 41772727 (-)
G68901 NA non-coding upstream 126858 41828329 ~ 41859014 (-)
LOC120560231 NA other downstream 258867 41319196 ~ 41401901 (-)
G68985 NA other downstream 583303 41076005 ~ 41077465 (-)
G68952 NA other downstream 710161 40924074 ~ 40950607 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other downstream 1330073 40313369 ~ 40330695 (-)
LOC120560061 NA other downstream 1634025 40000006 ~ 40026743 (-)
G68897 NA other upstream 51065 41752536 ~ 41829133 (-)
G68907 NA other upstream 53401 41754872 ~ 41782162 (-)
G68883 NA other upstream 135076 41836547 ~ 42073980 (-)
G68923 NA other upstream 227017 41928488 ~ 41929179 (-)
rnf34a NA other upstream 396856 42098327 ~ 42107122 (-)

Expression


Co-expression Network