LOC120561114


Basic Information

Item Value
gene id LOC120561114
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42663363 ~ 42809622 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU92678
TCCCGTCGGACCTTAATGAGTGTGACAGCCAGCGGAAGTAAACAAGGCTGCTGGCCGTAGCGTTAGCTGCATGCTGCTGTTGAATGAGCTGGAAGACGGTATTGTAGTCGTAGAGCAGATGATTCTTTCAGCTGGAACTAAGCAACAATGTCTTCAGTTGAGTGTTTGAGAGAGTTTGTCACCGAGCgactaactgctgctgctgaagaaatattccgagttgttgaaaaaactaTCGTCGAGTACGAGGAAGAGATCGCTCGGCAGCGCAGACTGTTGGATGGCGTTTGGAGACCAGAAATCAGGTTACACAGGATAGAGCTCCCACAGCAACATGGCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTATATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACATAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGtgtcctgctgcgtccactgcatccacccatgctctgctgtgcccggctatgacatgaactactacaactaccattgTATTCACTGTTCCACTATCTTTATTATgcctattattgccactgttcatcacaccccccgACCggtcctt
>XM_039804064.1
GGAAGTAAACAAGGCTGCTGGCCGTAGCGTTAGCTGCATGCTGCTGTTGAATGAGCTGGAAGACGGTATTGTAGTCGTAGAGCAGATGATTCTTTCAGCTGGAACTAAGCAACAATGTCTTCAGTTGAGTGTTTGAGAGAGTTTGTCACCGAGCgactaactgctgctgctgaagaaatattccgagttgttgaaaaaactaTCGTCGAGTACGAGGAAGAGATCGCTCGGCAGCGCAGACTGTTGGATGGCGTTTGGAGACCAGAAATCAGGTTACACAGGATAGAGCTCCCACAGCAACATGGCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGATCCTCCACAAATTACAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCAGAAGCAGGAGACTGATACCTTTCGTCACAGTAACAACATAAACAACAGTGACATGTCAGAGATTCACCGTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTCTAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCACCATGCCAGTTATAACCTCTGTGGAATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGTAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACGTGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTTTTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGGACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTATATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTCTAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACATAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGGAGCTCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCTAATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAgtcacagcaacaacaacactaACATGTCAGAGATTCACTGTAATTCTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAAGACCCAGAGCCTCCACAGATTAAAgatgaacaggaggaactgtgcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTATGTGCAGCAGAGAAGGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGAATCCGAAGCAAACAGTGACTACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACAAAACAAGAGCAGAAGTCACAGCAACAACTTAGACAACACTAAGGTGTCAGAGATTCACCCTAATACTCCAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGAAGACAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGTCAACGCAAGAGCAGAAGTCACAGTAACAATGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGATCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCCAACAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTACAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCACGGAGACTCAGCAACAACTAGAAATGCGGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGTAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGAAGACGCAAGAGCAGAAGTCACAGCAACAACGTACACAACACTAACGTGTCAGAGATTCACCCTAATACTCCAACAGAGCTCCCACAGCAACATGTCtgcaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTCTAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGACAGAACCAAAGAAGAGACGACGCAAGAGAAGAAGTCACAGTAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGTAACAACGTAGACAACACTAACTTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGAAGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGAtTCACCCTAATACTCAAACAGGTAAAAAGTCTTTCATATGTGACACATGTGGGAAAGACTTAAACCTGTCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92678 False 849 TUCP 0.49 6 42772991 42809622
XM_039804064.1 True 5340 mRNA 0.48 20 42663363 42809589

Neighbor

gene id symbol gene type direction distance location
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 1344 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 392152 42262425 ~ 42271211 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding downstream 406479 42241736 ~ 42256884 (-)
LOC120560212 NA coding downstream 450661 42209201 ~ 42212702 (-)
LOC120560222 NA coding downstream 484065 42175476 ~ 42179298 (-)
LOC120560237 NA coding upstream 10252 42819874 ~ 42822645 (-)
LOC120561115 NA coding upstream 12783 42822405 ~ 42854342 (-)
LOC120560194 NA coding upstream 64275 42873897 ~ 42958273 (-)
snapc4 NA coding upstream 295720 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 491997 43301619 ~ 43304446 (-)
G69175 NA non-coding downstream 7441 42653635 ~ 42655922 (-)
G69179 NA non-coding downstream 11957 42650291 ~ 42651406 (-)
G69177 NA non-coding downstream 14336 42648760 ~ 42649027 (-)
G69169 NA non-coding downstream 29638 42615221 ~ 42633725 (-)
G69149 NA non-coding downstream 124179 42538779 ~ 42539184 (-)
LOC120560258 NA non-coding upstream 160844 42970466 ~ 42971625 (-)
G69250 NA non-coding upstream 197237 43006859 ~ 43096619 (-)
G69254 NA non-coding upstream 211510 43021132 ~ 43022838 (-)
G69258 NA non-coding upstream 227925 43037547 ~ 43038477 (-)
G69266 NA non-coding upstream 280019 43089641 ~ 43091900 (-)
G69140 NA other downstream 126405 42497565 ~ 42536958 (-)
G69105 NA other downstream 530782 42130611 ~ 42132581 (-)
G68921 NA other downstream 547102 42107630 ~ 42116261 (-)
G69104 NA other downstream 548604 42112792 ~ 42114759 (-)
rnf34a NA other downstream 556241 42098327 ~ 42107122 (-)
G69229 chek2 other upstream 160462 42970084 ~ 43014065 (-)
chek2 chek2,LOC102215705 other upstream 192633 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 266608 43076230 ~ 43099165 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 333766 43143388 ~ 43178989 (-)
G69249 NA other upstream 401397 43211019 ~ 43218894 (-)

Expression


Co-expression Network