card9 (card9,LOC108245830)


Basic Information

Item Value
gene id card9
gene name card9,LOC108245830
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43076230 ~ 43099165 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU92793
TCGGGGGATAACGAGGAGGTGGCAGCGCTGCAGGACCAGGACTCTCCTGGAGGAGGCCCCACAAAGTCTGAACACAGGCCCAGCACTGATGCATCATGGgatgAGAAGACAGGCAGCTGTCTGCCCTTCAGGAGTCGACCTAACTTCTTCTACCGCAGGAAGCGCGCCCTCAGATCAAAGTTTACCTGCAGGGACTTCAACTCCAGTAACCATGACGACAGCAGTGGCAGTGACATCACCGACGACTCTGACTGAATACGCGCTG
>TU92794
ACAGAGACATGCAGATAGAGgtggagCGTCTGAAACACACCGTGAGACTGCTGAAACAACGTACCCTGAGGCCACTGcaggagGAGTCTGGTTCTGCCCAGAGAGAACTTCTCCCACCTCAACAGActggaggagaagaaagaggagacgcaggaggagaagaaagagacgcaggaagagaaaaaggagGATAGGAAGGAGGAGACGCAGCAGAAAGAGAGTCCAGCTCCTGTTCAGATGAACCTCCTGACGTCAGTGTTTAAACTGAGGAGAGACCTGCACCGAGCCgaggagcagagagacaggAGcgtggaggagaaggaggagttGCAGCTGCTGTGTGCTCAGCTGAAGGGAGACGCCCGGATGTACCGCCAACGAAACAAACAAACCCTCCGACAGCTGGAGGAGGTGATccgagagagagacaagGCTCTGGCGTCGCGGAcggagcagcaggaggaggcgCGGCTGCTCCTGCAGGAGAAGGACCAGTACCGGGAGACGGTCCGACAGCTGACAGAGCGATCTGATaggctggagctgctgctgctcagctCGCAGGGGGAGGAGCTACAGCTGAGGACACGCCTCCGCAGACTCTCCTGCAACACACACCACtgtgagaggagcagtgaggaagaggaggagccaGCAGAGAGTGCTGC
>XM_039804068.1
ATCAGTCAGCAGACTGCTCTCTCTGTGTTCAGTGTGTAACAGTCCAGGAGTCAGAGTTAGGGGGAGTTTTAGGAGAGAAACAGCAGTTAGGGTGAGTTTTAGGGGAGAGTTTTGGGGGTGAGTTTTAGGGGAGAGTTTTaggggagagatggagggggTGAGTGAGGACGATCTGTGCTGGCTACAGCTGGATGATTTCAGGATGCTGCTCATCAAAACCATCGAGCCCTCCAGGATCACCCCGTACCTCCGCCAGTGCCAGgtgatCAGTGCTGAGGATGAGGAGCAGCTCTTCAACGACCCCGGCCTCGTCATCAGGAGGAGGAAAGTCGGAGCCCTGCTGGACATCCTGCAGAGGACCGGGGTCAAAGGTTACACAGCGTTCCTGGAGAGTCTGGAGCTGGACTATCCTCAGCTGTACAGCCGCATCACAGGGAAGGAACCCAACAAGACCTTCAGCATCCTCATAGATACAGCAGGTGAATCTGGTctgactgcctaTACAGCAGAAGATGTCATCATCTTCTGGATCTCCTCAGACTGTGCCGGTATCCTCAGAAGGCTCTGTGTGAAGAAGACCAGTCTCTGGACCTTTGCTGTTTCCATGGCTCCCCTCTCTTCATCAGCAAGCCACCACAGTCGTAAACTTTGGGATGGTGGAAGCCGCGATCCTTGCCTCATGGGAGGCCAACAGCTGCCCAGATCGAGTGAACACTGTCTCTTGAGGAAGCAGTTTGGCCACTTTGAGCTGGTCACAGATTCCATCGAGCTGACTCTCATGGACAACATAGAGGCCCCCTGCTATCACAGAGACATGCAGATAGaggtggagCGTCTGAAACACACCGTGAGACTGCTGAAACAACGTACCCTGAGGCCACTGcaggagAGCAGGAGTCTGGTTCTGCCCAGAGAGAACTTCTCCCACCTCAACAGActggaggagaagaaagaggagacgcaggaggagaagaaagagacgcaggaagagaaaaaggagGATAGGAAGGAGGAGACGCAGCAGAAAGAGAGTCCAGCTCCTGTTCAGATGAACCTCCTGACGTCAGTGTTTAAACTGAGGAGAGACCTGCACCGAGCCgaggagcagagagacaggAGcgtggaggagaaggaggagttGCAGCTGCTGTGTGCTCAGCTGAAGGGAGACGCCCGGATGTACCGCCAACGAAACAAACAAACCCTCCGACAGCTGGAGGAGGTGATccgagagagagacaagGCTCTGGCGTCGCGGAcggagcagcaggaggaggcgCGGCTGCTCCTGCAGGAGAAGGACCAGTACCGGGAGACGGTCCGACAGCTGACAGAGCGATCTGATaggctggagctgctgctgctcagctCGCAGGGGGAGGAGCTACAGCTGAGGACACGCCTCCGCAGACTCTCCTGCAACACACACCACtgtgagaggagcagtgaggaagaggaggagccaGCAGAGAGTGCTGCTAAAGGTGAGAGTCAGAGAGATGAGTTACACACTCAGCACATTCACACTGATGCTGATCAATGGGCTTCTTCAGGAAGGAAATGGGACATATCAGGTGACCTGTATCAGCTGACCTGTGTACCATGTGACCTGTGTACCATGTGGTTCAGCGGAGAGCGATCGGGGGATAACGAGGAGGTGGCAGCGCTGCAGGACCAGGACTCTCCTGGAGGAGGCCCCACAAAGTCTGAACACAGGCCCAGCACTGATGCATCATGGgatgAGAAGACAGGCAGCTGTCTGCCCTTCAGGAGTCGACCTAACTTCTTCTACCGCAGGAAGCGCGCCCTCAGATCAAAGTTTACCTGCAGGGACTTCAACTCCAGTAACCATGACGACAGCAGTGGCAGTGACATCACCGACGACTCTGACTGAATACGCGCTGCCTTCAAAATAAGAGTCTCAAAGTC

Function

symbol description
card9 Predicted to enable CARD domain binding activity. Predicted to be involved in positive regulation of I-kappaB kinase/NF-kappaB signaling. Predicted to act upstream of or within regulation of apoptotic process. Predicted to be active in cytoplasm. Is expressed in brain; gill; liver; pleuroperitoneal region; and unfertilized egg. Human ortholog(s) of this gene implicated in chronic mucocutaneous candidiasis. Orthologous to human CARD9 (caspase recruitment domain family member 9).

NR:

description
caspase recruitment domain-containing protein 9-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92793 False 265 lncRNA 0.57 3 43076255 43076982
TU92794 False 668 TUCP 0.58 6 43077852 43088827
XM_039804068.1 True 1929 mRNA 0.55 16 43076230 43099165

Neighbor

gene id symbol gene type direction distance location
LOC120560194 NA coding downstream 117957 42873897 ~ 42958273 (-)
LOC120561115 NA coding downstream 221888 42822405 ~ 42854342 (-)
LOC120560237 NA coding downstream 253585 42819874 ~ 42822645 (-)
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 414211 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 805019 42262425 ~ 42271211 (-)
snapc4 NA coding upstream 6177 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 202454 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 209183 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 381796 43480961 ~ 43528118 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 458552 43557717 ~ 43582312 (-)
G69258 NA non-coding downstream 37753 43037547 ~ 43038477 (-)
G69254 NA non-coding downstream 53392 43021132 ~ 43022838 (-)
LOC120560258 NA non-coding downstream 104605 42970466 ~ 42971625 (-)
G69184 NA non-coding downstream 256896 42780818 ~ 42819334 (-)
LOC120560255 NA non-coding downstream 304797 42768403 ~ 42771433 (-)
G69246 NA non-coding upstream 4795 43103960 ~ 43104752 (-)
G69271 NA non-coding upstream 52697 43151862 ~ 43153110 (-)
G69251 NA non-coding upstream 66956 43166121 ~ 43194392 (-)
G69272 NA non-coding upstream 104496 43203661 ~ 43225724 (-)
G69273 NA non-coding upstream 126770 43225935 ~ 43226903 (-)
chek2 chek2,LOC102215705 other downstream 51180 43002255 ~ 43025050 (-)
G69229 chek2 other downstream 62165 42970084 ~ 43014065 (-)
LOC120561114 NA other downstream 266608 42663363 ~ 42809622 (-)
G69140 NA other downstream 539272 42497565 ~ 42536958 (-)
G69105 NA other downstream 943649 42130611 ~ 42132581 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 44223 43143388 ~ 43178989 (-)
G69249 NA other upstream 111854 43211019 ~ 43218894 (-)
LOC120561119 LOC102192266,LOC107386210,LOC101154874,LOC101486486 other upstream 124312 43223477 ~ 43251312 (-)
G69356 LOC106941104,LOC103460379 other upstream 272602 43371767 ~ 43380599 (-)
phf19 phf19 other upstream 432068 43531233 ~ 43551988 (-)

Expression


Co-expression Network