LOC120561119 (LOC102192266,LOC107386210,LOC101154874,LOC101486486)


Basic Information

Item Value
gene id LOC120561119
gene name LOC102192266,LOC107386210,LOC101154874,LOC101486486
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43223477 ~ 43251312 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU92812
CTGCAGCGgcggaggagaggaagaggagagaagaagaactGAAGGTCATTTGAGAGAATCTGAGATTTCGGATCGATGATCGACTCACTGATCGCTGCGCGTGCACAGCGTAATGACATGACACAAGAGCACGGAGCGACAGACGGATTAGCTGCTGCATCCATCCACCTGCCTGTCTCCCTGcctgctgcctgtctgtctgactgaatCTCCACCAGCAGCATCCAGATTCCAcacctgtctttctctctctcgctctctctctctctctctgcctgtctcgctgtctctctatctctccgtctgtctctgtctgtctgtccacacctgtctctctccacacctGTCTCCCCGCCGTGTGCCGGCCGTGTCTCCGCCATGGGGAACCGGGGGATGGAGGACCTGATCCCGCTGGTGAACCAGCTCCAGGACGCCTTCGCGTCCATCGGCCAGAACTCGAGCCTCGACCTGCCGCAGATCGCGGTGGTGGGCGGCCAGAGCGCCGGCAAGAGCTCCGTTCTGGAGAACTTCGTGGGGA
>XM_039804069.1
tgtgtgtgtgatgctccCTGCAGCGgcggaggagaggaagaggagagaagaagaactGAAGGTCATTTGAGAGAATCTGAGATTTCGGATCGATGATCGACTCACTGATCGCTGCGCGTGCACAGCGTAATGACATGACACAAGAGCACGGAGCGACAGACGGATTAGCTGCTGCATCCATCCACCTGCCTGTCTCCCTGcctgctgcctgtctgtctgactgaatCTCCACCAGCAGCATCCAGATTCCAcacctgtctttctctctctcgctctctctctctctctctgcctgtctcgctgtctctctatctctccgtctgtctctgtctgtctgtccacacctgtctctctccacacctGTCTCCCCGCCGTGTGCCGGCCGTGTCTCCGCCATGGGGAACCGGGGGATGGAGGACCTGATCCCGCTGGTGAACCAGCTCCAGGACGCCTTCGCGTCCATCGGCCAGAACTCGAGCCTCGACCTGCCGCAGATCGCGGTGGTGGGCGGCCAGAGCGCCGGCAAGAGCTCCGTTCTGGAGAACTTCGTGGGGAAGTTAGTAGTTctactgcagccagccagcaGGGGGGGTCCAGATGTCTGGGCTCCCCTGAAGTACGCAGAGTTCCTCCACTGCAAAGGGAAGAAGTTCATCGACTTCGATGAAGTTCGTCTGGAGATCGAAGCTGAAACTGATCGGATCACCGGACAGAACAAAGGAATCAGTCCAGTCCCCATAAACCTACGAGTTTACTCCCCCcacgtgtTAAACCTGACTCTGGTGGATCTTCCCGGCATGACGAAGGTCGCGGTGGGCGACCAGCCGGTAGACATCGAGCaccagatcaaagagatgctcATGCAGTTCGTCACCAAGGACAACTGTCTCGTGTTGGCTGTTTCCCCCGCCAACTCTGACCTCGCCAACTCTGACGCTCTGAAGATCGCAAAGGAGGTCGACCCGCAAGGTCTGAGGACCATCGGTGTGATCACCAAGCTGGATCTGATGGATGAAGGAACCGACGCCAGAGACATTTTGGAGAACAAACTGCTTCCACTACGCAGAGGTTACGTCGGGGTGGTGAACCGCAGTCAGAAGGACATCGACGGGAGGAAAGACATCACAGCAGCCTTGCAGGCTGAGAGGAAGTTCTTCCTGTCGCACCCGTCATACCGACACCTGGCAGAACGCATGGGCACTGCCTACCTGCAGAAGATCCTCAAccagCAACTGACCAACCACATCCGGGACACGTTGCCGGGGTTACGCAGCAAACTGCAGAGCCAGCTGCTGTCCATCGAGAAGGAGGTGGAGGAATACAAGAACTTCAGACCGGATGACCCGAGCCGAAAGACCAAGGCCCTGCTGCAgatgGTGCAGCAGTTTGCGGTGGACTTTGAGAAGCGGATTGAAGGATCCGGAGATCAGGTGGACACCTATGAGCTGTCAGGAGGAGCCAAGATCAACCGAATTTTCCACGAACGCTTCCCCTTCGACCTGGtcaagctggaGAGTGATGAGAAGACTCTCCGTAAAGAGATCAGCTACGCCATCAAGAACATCCACGGAATCAGGACGGGTCTGTTCACACCTGACATGGCGTTTGAGACGATCGTGAAGCGTCTGATCGCTCAGATCAAAGAGCCGTGTCAAAAATGTGTCGACATGGTGATCAACGAGCTGGTCAACACCGTGAGGCAGTGCACACAGAAGCTGGCTCAGTATCCGATGCTCcgagaggagatggagagaatCGTCACCCAGCAcataagagacagagagagtcgCACCAAAGAacagGTGTTTTTGCTGATTGACATTGAGTTGGCCTACATGAACACAAACCATGAAGACTTCATCGGCTTTGCAAAtgctCAGCAGAAGAGCTCTCagatgaacaagaagaaagCAGCAGGAAACCAGGACGAGATCATGgtgatCCGTAAAGGTTGGCTGACCATCAACAACATCAGCATCATGAAGGGCGGAGCTAAAGAGTACTGGTTCGTCCTGACGGCAGAGACACTGTCTTGGTACAAAGATGAcgagGAGAAGGACAAGAAGTACATGCTGCCTGTAGACAACCTGAAACTCAAAGACATCGAGAAGAGCTTCATGTCCAGCAAACACATCTTCGCCCTGTTCCACAATGAAcacagGAACGTGTACAAAGACTCCCGTCAGCTGGAGCTGGCCAGTGAGTCTCAGGAGGAGGTGGACAGCTGGAAGGCTTCTTTCCTACGCGCCGGAGTGTACCCTGAACGCACCGTGGATAAAGAGAAGGTGGAGGCGGAGGAAGCGAGCGGCGACGGGCAGATCCACAGTCTGGACCCTCAGCTGGAGAGACAGGTGGAGATCGTTAGGAACCTGGTGGACTCGTACCTGTCCATCATCCACCGCACGGTCCGGGACCTGATCCCCAAGACCATCATGCACCTGATGGTCAACAAcACGAAGGAGTTCATCCACTCTGACCTGCTGGCTAATCTTTACTCCTGCGGAGACCAGAACAGCCTGATGGAGGAGTCCCAGGAACAGGCCCAGCACCGTGATGAGATGTTGAGGATGTACCACGCCCTGCGTGAGGGTCTGAGCCTCATTGGTGACATCAGCACCTCCACCATCAGCACGCCCATGCCCCCCCCCGTCGACGACTCCTGGCTGCAGGTCACAGGGATGCCATCGGGACGCAGGTCTCCCATGTCCAGTCCGACCCCCCAGCGTCGGGCCCCTCCTGGACCTCCCCGTCCCGGTGGACGAGCAGCCCCCGGACCTCCATCTCGTCCCGCGGTGTCACCAGATCCTGGAGCACCCAACGTGCCCTCCAGACCCAACAGAGCCCCCCCACCGGGAGTccccagTCGTCCCAGTAAAGGTAGCCCCGCCCACGGAGAGAGCCCCCAGTCTTCTGTGGAGTATTAACCTTTGACCCCGGCgggtttctgtttctgtcaaCTTCACTATAATCAGCTCATCATGACTGTACAGCAAACACTCAGCAATATTACATGTTTGGtccagctgtctgtctgctctctggAGATTGAGACAGGTccgctgtctgtctgctctctggAGAGTGAGACaggtctgctgtctgtctgctctcacGAGAGTGAGACATGTCCTTCTCTCAGGAGAGTGAGACAGGTCCTGCTCTGAGGAGAGTGAGacatgtctttctgtctgtataAAGTTCTGAGGATCTCCAGACTGATCTGTCTTTTATTCTTATTCATGCTGAAATGTTGCATTGTTGAACTTTTCTTTACAGTGTAAAGTTTACATATAATTTTAACTGATGTATTTATTGatctatttattgatttatttacaaTGTGTGGTTCTTATTGAAATGTGATGTAATATGATGTTATCTGTCAACTTGTTAAACATGGACCCTGTTTTCTCATGTTCTGGTGTCtgactggtccagtattaatcagttagagtcactaaaagttctgttgttgctgctgacagactcagattattattctaagtgtctgacaacattatgggatggatccctacagag

Function

NR:

description
PREDICTED: dynamin-1-like isoform X1

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005874 microtubule cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K01528 DNM1_3; dynamin 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
TU92812 False 538 TUCP 0.59 1 43250758 43251295
XM_039804069.1 True 3540 mRNA 0.54 23 43223477 43251312

Neighbor

gene id symbol gene type direction distance location
snapc4 NA coding downstream 81924 43105342 ~ 43141553 (-)
LOC120560194 NA coding downstream 265204 42873897 ~ 42958273 (-)
LOC120561115 NA coding downstream 369135 42822405 ~ 42854342 (-)
LOC120560237 NA coding downstream 400832 42819874 ~ 42822645 (-)
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 561458 42658356 ~ 42662019 (-)
LOC120561120 NA coding upstream 50307 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 57036 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 229649 43480961 ~ 43528118 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 306405 43557717 ~ 43582312 (-)
LOC120560219 NA coding upstream 338732 43590044 ~ 43651535 (-)
G69251 NA non-coding downstream 29085 43166121 ~ 43194392 (-)
G69271 NA non-coding downstream 70367 43151862 ~ 43153110 (-)
G69246 NA non-coding downstream 118725 43103960 ~ 43104752 (-)
G69266 NA non-coding downstream 131577 43089641 ~ 43091900 (-)
G69258 NA non-coding downstream 185000 43037547 ~ 43038477 (-)
G69340 NA non-coding upstream 15505 43266817 ~ 43450492 (-)
G69342 NA non-coding upstream 23167 43274479 ~ 43275772 (-)
G69339 NA non-coding upstream 134846 43386158 ~ 43396705 (-)
G69341 NA non-coding upstream 148749 43400061 ~ 43409122 (-)
G69371 NA non-coding upstream 232798 43484110 ~ 43484519 (-)
G69249 NA other downstream 4583 43211019 ~ 43218894 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other downstream 44488 43143388 ~ 43178989 (-)
card9 card9,LOC108245830 other downstream 124312 43076230 ~ 43099165 (-)
chek2 chek2,LOC102215705 other downstream 198427 43002255 ~ 43025050 (-)
G69229 chek2 other downstream 209412 42970084 ~ 43014065 (-)
G69356 LOC106941104,LOC103460379 other upstream 120455 43371767 ~ 43380599 (-)
phf19 phf19 other upstream 279921 43531233 ~ 43551988 (-)
LOC120560198 LOC106532130,LOC103370617,LOC108248104 other upstream 414475 43665787 ~ 43709261 (-)

Expression


Co-expression Network