phf19 (phf19)


Basic Information

Item Value
gene id phf19
gene name phf19
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43531233 ~ 43551988 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU92966
ggggcttggATGATGGAGAGGGGGCGGAGTCCAGTCTAAGTGTTGGACAGTTCGTCCTCTGTCATTGGTCGGATGGACTCTACTACCTGGGCAAGATACAgaggGTGAGCCCTCCCAGGCAGAGCTGCTTCGTTACGTTTGAGGACAACTCCAAGTTCTGGGTCCTCTGGAAGGACATCCAACAcgCTGGTGTGCCGGGGGAGGAGCCTCGCTGCTCTGTCTGCCGGGAGGCGGAGCCAGACTCTGACAGCCAATCAAACCACAACAACCAGATCCTCATCTGCGGCAAGTGTGGCATCGGTTTTCACCAGCAGTGCCATGTTCCTGCTGTAGAGGGCAGCGTCAGTCTCAGTCCCTGGTTCTGTAGACGTTGTGTCTTTGCTCTAGCTGTccggAAAGGCGGTGCTCTGAAGAAAGGTCTGATAGCCAAAGCTCTGACCTCCATGAAGCAGGTCCTGCTCTACGATCTGGACTCTCTGGACTGGGACTCTCAGCACCGGACCAATCAGCAGCAGTGTTACTGTTACTGTGGCGGCCCCGGAGAGTGGTACCTGAAGATGCTGCAGTGTTTCCGGTGTCAGCAGTGGTTCCATGAAGCCTGCACGCAGTGTCTGCAGGAGGCCATGCTGTTCGGAGACAGGT
>XM_039802526.1
aaacctcctcctcctcctgtgatTCGCGGGAAAAGTGAAAAATGGCGGCGGTTGAAGTTTGAAGTTTAGCGCCACGAAAACagacaggagacagagagagagagagactggcagagagagagacagacagagagatagagagacggAGACAACGGGGCAGAGgcccggagagagagagacagttaaaAGACGCTACAGCCCCGGACTGTGTGTCCCGGTGGAGTCCAACCTGTCGGTCGGAGCAGCACCAGCCTGTCTGTGGCTCAGAGGACCAGAGCACCGGAGACAGGTGGACACAGAGCGAACCGGAGGACGTGCCGTTGAGGATGTTCGAGGATCTGAGAAGCTTCTGTAGTCTGGAGCCACCGGTGTCTCCGGGGGGCGCAGCCTGTCGCAGGGGGCGGAGCCTGTCTCCTGGAGGCGGAGCCTGTCacagggggcggggcttggATGATGGAGAGGGGGCGGAGTCCAGTCTAAGTGTTGGACAGTTCGTCCTCTGTCATTGGTCGGATGGACTCTACTACCTGGGCAAGATACAgaggGTGAGCCCTCCCAGGCAGAGCTGCTTCGTTACGTTTGAGGACAACTCCAAGTTCTGGGTCCTCTGGAAGGACATCCAACAcgCTGGTGTGCCGGGGGAGGAGCCTCGCTGCTCTGTCTGCCGGGAGGCGGAGCCAGACTCTGACAGCCAATCAAACCACAACAACCAGATCCTCATCTGCGGCAAGTGTGGCATCGGTTTTCACCAGCAGTGCCATGTTCCTGCTGTAGAGGGCAGCGTCAGTCTCAGTCCCTGGTTCTGTAGACGTTGTGTCTTTGCTCTAGCTGTccggAAAGGCGGTGCTCTGAAGAAAGGTCTGATAGCCAAAGCTCTGACCTCCATGAAGCAGGTCCTGCTCTACGATCTGGACTCTCTGGACTGGGACTCTCAGCACCGGACCAATCAGCAGCAGTGTTACTGTTACTGTGGCGGCCCCGGAGAGTGGTACCTGAAGATGCTGCAGTGTTTCCGGTGTCAGCAGTGGTTCCATGAAGCCTGCACGCAGTGTCTGCAGGAGGCCATGCTGTTCGGAGACAGgtTCTATCTCTTCCTGTGTGCAGCGTGTAATaaaggtctctctctcttcttcagtaatgCGGCGGCGCTGTCTCTGCGCTGGGTGGACGTGGTTCATCTCGTTCTCTATAATCTGTCCGTCAGCAGCAAGAAGAAATACTTTGAGCTGGATGAGATCCTCGCCTTCGTCTCCGCTAACTGGGACCACCTGCAGCTCGGGAAGCTGTCTAACACTCCTCCATCAGAGAGGGGGCAGCACCTGCTGGACGCTCTCAATAAATACAAGAGCAAgtttcTGTGTGGGAAGGAGATAAAGAAAAGGAAGTGCATCTTTCGTCTGCGGACCAGAgtcccccccaaccccccctccAAACTCTTTCCTGAGCGCGCTCAGAGCGACGGAGGCCAGGGCCGCAAGACCCCCGCCGCCAGGAACAGtgCTTCAgctgagaggaggaagaggaagtccAAGTGGCTGCTAGAAGACGCCATCCCTAATaacgaGCTGTCCTGCAGTTGGACGTCCAACCACCACATGGCCAACATCTTTGACTTCACGCTGGACGAGCTGCAGAGCCTCAAGAGCAGCTCCAGTAGGACGGTCAGTATCGATCAGGACTCTACCGATGCTTCAACTTCAGGGTCTGCTACAACCAGTGCCTCCTATCACTTCAGGAGGAGGGTGGGCAGCAGGAAGAGGAAGTTGCCTAGCAACAGCTACAGCCAGTGGGCCAATCGCAGCGAGGCTGGCTCCGAGCCTCCTGGGATGCTGGAGGACGCAGAAGAAGAAGCGTCAGACTCCTCCCACTTCCTGTCGGACCCCACCCAGATCCCGTCTgactcctccctctcctccatctTCGGCGTGGGCGAGCGGTACCAGGTGCTGGCGCGCCGCGTCACGCCGCAAGGCGCCGTGCAGTACCTGCTGGAGTGGGAGGGGCCAACGCCTTATTAGGAAGCGTTACATCACCGGTGTATTCCTCCGCTCTCTTGTCCAATCGGAGCTCAGCAACGTCAGGAAGGTTTTAGTCCacgttaatgtttttaaatcatGTCCGTTACCTCCGTCAGACTGTCGCTAACCTCATGTAaagtttttaaactttattttgttaCAAACATGACAACACACAATGTCTCCTGGTTCAACATGTTGGGACGTCTgctgaggagaggaggaggaggagtcacAGCTGGTCATCAGTCTGGAGACACAAGTTAACTTAATATAGCcaaagacacgcacacagatatatacacacacagacacacacacacgtacatacatatacacacacacacacgcacacagatatacacacacagacacacacac

Function

symbol description
phf19 Predicted to enable DNA binding activity; chromatin binding activity; and methylated histone binding activity. Predicted to be involved in chromatin organization and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human PHF19 (PHD finger protein 19).

NR:

description
PHD finger protein 19-like

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K11486 PHF19, PCL3; PHD finger protein 19

RNA

RNA id representative length rna type GC content exon number start site end site
TU92966 False 642 TUCP 0.57 6 43541243 43546558
XM_039802526.1 True 2399 mRNA 0.56 15 43531233 43551988

Neighbor

gene id symbol gene type direction distance location
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding downstream 3115 43480961 ~ 43528118 (-)
LOC120561121 NA coding downstream 220386 43308348 ~ 43310847 (-)
LOC120561120 NA coding downstream 226787 43301619 ~ 43304446 (-)
snapc4 NA coding downstream 389680 43105342 ~ 43141553 (-)
LOC120560194 NA coding downstream 572960 42873897 ~ 42958273 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 5729 43557717 ~ 43582312 (-)
LOC120560219 NA coding upstream 38056 43590044 ~ 43651535 (-)
endog endog coding upstream 257641 43809629 ~ 43821302 (-)
LOC120560874 ntng2 coding upstream 280409 43832397 ~ 43868090 (-)
LOC120560252 NA non-coding downstream 1156 43528305 ~ 43530077 (-)
G69372 NA non-coding downstream 19863 43509948 ~ 43511370 (-)
G69371 NA non-coding downstream 46714 43484110 ~ 43484519 (-)
G69340 NA non-coding downstream 80741 43266817 ~ 43450492 (-)
G69341 NA non-coding downstream 122111 43400061 ~ 43409122 (-)
G69376 NA non-coding upstream 4312 43556300 ~ 43557432 (-)
LOC120560250 NA non-coding upstream 6390 43558378 ~ 43562599 (-)
G69378 NA non-coding upstream 13451 43565439 ~ 43566214 (-)
G69379 NA non-coding upstream 32933 43584921 ~ 43585345 (-)
G69404 NA non-coding upstream 98157 43650145 ~ 43650465 (-)
G69356 LOC106941104,LOC103460379 other downstream 150634 43371767 ~ 43380599 (-)
LOC120561119 LOC102192266,LOC107386210,LOC101154874,LOC101486486 other downstream 279921 43223477 ~ 43251312 (-)
G69249 NA other downstream 312339 43211019 ~ 43218894 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other downstream 352244 43143388 ~ 43178989 (-)
card9 card9,LOC108245830 other downstream 432068 43076230 ~ 43099165 (-)
LOC120560198 LOC106532130,LOC103370617,LOC108248104 other upstream 113799 43665787 ~ 43709261 (-)

Expression


Co-expression Network