kctd10 (kctd10)


Basic Information

Item Value
gene id kctd10
gene name kctd10
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18715421 ~ 18720543 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802307.1
CCCTTTAAACAGAGAAGAGGAACGTTGACGTCGTGTTTATAACTGCGCAGCGTTGGACCGGAAGGAAGTGGGTGTTAGCTGACTGACGTTAGCAAGCTACAATTATAAAGTCTGCTGCGGGTTCTATGGAAGAGATGTCAGGAGAGAGCGTGGTGAGCTCGGCACTGCCGGCAGCTACAACCCGGACTACATCCTTCAAGGGCTCCAGCCCCAGCTCTAAATATGTGAAGTTAAATGTGGGCGGGGCACTGTACTACACTACAATGCAAACACTAACCAAACAGGACACAATGCTCAAAGCCATGTTCAGTGGCAGGATGGAGGTCCTCACAGACAGTGAAGGTTGGATCTTGATTGATCGCTGTGGGAAACATTTTGGAACAATCCTTAACTACCTTAGAGACGGAGCAGTGCCGCTTCCAGACAGCCGACGAGAAACAGAGGAACTGCTCGCTGAGGCCAAGTATTACCTTGTCCAAGGCCTAGCTGATGAATGCACAGCTGCCTTGCAGAACAAAGAATCGTATGAACCCCTTTGTAAAGTGCCTCTGATGACATCATCTAAGGAAGAGCAGAAGCTTATTGCAACCTCAAATAAGCCTACTGTCAAACTGCTGTATAACCGAAGCAACAACAAGTATTCGTACACCAGcaATTCTGATGACAACATGCTGAAAAATATTGAACTGTTTGACAAGCTGTCATTGCGGTTCAACGGTCGGGTACTGTTTATCAAAGATGTGATTGGGGATGAGATCTGTTGTTGGTCATTTTATGGCCAGGGGCGCAAAATTGCCGAAGTGTGCTGCACCTCCATTGTTTATGCCACAGAAAAGAAGCAGACAAAGGTGGAGTTCCCTGAGGCACGAATCTATGAGGAGACCCTCAACATCCTCCTGTACGAGTCCCATGATGGGAGGGGTCCAGACAATGCCCTGCTGGAGGCCACAGGCGGCGCTGCAGGACGATCTCATCATCTGGATGAGGACGAGGAGAGAGATCGAATCGAGCGAGTTCGTAGGATTCATATCAAACGACCTGACGACcgcacacaccaccaccagtgaCCTTTCTCCTTCGACCCGTCAGCCTGTGTCTCTGACCCTGGACAGTCTTTGCACCACGCTTGTGCCTTACATCACCCAgcgcctctctgtctctctccccaaTCTTATTTTACCAGCTTTTCCTCCAGGAGAGTACTATGAGATGAGTGTCACACAACAGTGTGTAGTGGTGACgtgattttgtgtttgtttgtgtgtcatctTTGTTGTGTGGTCTGACAGGCTGTAGTGTTTTGTTCTCCATTTGTTAGTCTTTATAACTTCTATTACTATGACTGCTAGTGTGCAGAAGCCCATAGACATGGGTGTTTGCATTCAGCACTGCAGTTGACCACAGttttacctgagtgtgtgaaaACAAAGAGTATTAAGAGCATTGTTGCAGTGCATCCAGGAGAACAAGAATTATGTCATGTAAGCAGCTAAAGATAAATGGTTAATAGTTTTGCTTCTCCTTACTATGGTTCTGACGGGTCCACTGTTAAAGTCATCAGTGGATTACCAAGGTGTTTCACACAGTGGGGCCACATGGTGGCACTATTTTACTCTTAGAAGATGTTACCAAGGCTATTTTGTAGCCTGCAGATAATGGCAATTAAaccttttttcaattttattaaGTTTTTGATACAGTTAAGATATCACAGGTGGATGCAAAATGTCACTGTAGTGCTTTTGCCATATTTAGTTTTAGCATTTATGCATTTTTCCCTTCACTCCACTAAATGATCATTATTTTCAGTGGAGGGAACTTGAGAAGTGGCATGAGGTGTTAAATGTACTGGGGTGATTGATGGATGCTGAAGCTGAAGTGAATGACTGTAACTGGAGATCTCCCTGGCAGGAAGGGAATCCTGTCTACAAGCTTTTAACACAGAGAGAAATTAGACCTGTCCATCACCACATTAATCAGAGAATGTACTGTCTGCACACAATAGGTTTTAGTTGAAATATGTCTAACAATCACAGTACTTGTAGGCCTGTTGTACAGAAGTGaacatatatgtatgttttatatttatacatacTTTATCACAAATAAATTTCTACAAACattc

Function

symbol description
kctd10 Enables transcription corepressor activity. Acts upstream of or within circulatory system development; pectoral fin development; and regulation of macromolecule biosynthetic process. Predicted to be part of Cul3-RING ubiquitin ligase complex. Is expressed in several structures, including brain; fin; head; pericardial region; and pleuroperitoneal region. Orthologous to human KCTD10 (potassium channel tetramerization domain containing 10).

NR:

description
PREDICTED: BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process

KEGG:

id description
K15074 BACURD; BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802307.1 True 2125 mRNA 0.45 7 18715421 18720543

Neighbor

gene id symbol gene type direction distance location
foxn4 foxn4 coding downstream 22524 18685461 ~ 18692897 (-)
pole pole,LOC102794752 coding downstream 55592 18642871 ~ 18659829 (-)
pes pes1,LOC101476782,LOC102794482 coding downstream 78380 18629967 ~ 18637041 (-)
gal3st1a gal3st1 coding downstream 86946 18622821 ~ 18628475 (-)
lztr1 lztr1 coding downstream 94267 18613470 ~ 18621154 (-)
trpv4 trpv4 coding upstream 127194 18847737 ~ 18861234 (-)
gltpa gltp,LOC102799183 coding upstream 141866 18862409 ~ 18868686 (-)
git2a git2 coding upstream 157619 18878162 ~ 18896234 (-)
slc6a4b LOC106918286,LOC103470329,LOC103142877,LOC103353553,LOC107393971,LOC104942803 coding upstream 189722 18910265 ~ 18918557 (-)
trnak-uuu_12 NA coding upstream 232357 18952900 ~ 18952972 (-)
G62625 NA non-coding downstream 175406 18539126 ~ 18540015 (-)
G62630 NA non-coding downstream 180140 18534933 ~ 18535281 (-)
G62629 NA non-coding downstream 193546 18521564 ~ 18521875 (-)
G62586 plekha2 non-coding downstream 317475 18394836 ~ 18397946 (-)
G62571 NA non-coding downstream 357668 18355242 ~ 18357753 (-)
G62733 NA non-coding upstream 26650 18747193 ~ 18748609 (-)
G62771 NA non-coding upstream 116431 18836974 ~ 18845777 (-)
G62772 NA non-coding upstream 184776 18905319 ~ 18906567 (-)
G62817 NA non-coding upstream 236714 18957257 ~ 18961477 (-)
G62872 NA non-coding upstream 367220 19087763 ~ 19088373 (-)
G62626 LOC103357464 other downstream 203160 18510155 ~ 18512261 (-)
zgc:158398 NA other downstream 223014 18488162 ~ 18492407 (-)
iqcd NA other downstream 272403 18437676 ~ 18443018 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other downstream 329152 18383005 ~ 18386269 (-)
G62580 tacc1,LOC101470878,LOC102206806 other downstream 334919 18377602 ~ 18380502 (-)
mmab mmab other upstream 14365 18734908 ~ 18737406 (-)
ficd ficd other upstream 379701 19100244 ~ 19102474 (-)
si:ch211-225b11.1 LOC103353539,LOC101465611,LOC100705171 other upstream 458962 19179505 ~ 19237086 (-)
LOC120560442 LOC104920315,LOC103374896,LOC100704901 other upstream 828908 19549451 ~ 19554908 (-)
LOC120561342 NA other upstream 990905 19711448 ~ 19731573 (-)

Expression


Co-expression Network