LOC120560190


Basic Information

Item Value
gene id LOC120560190
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41432594 ~ 41454486 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802433.1
TTGTCCAGCGATGGCAAATTGGATGAAGAGGTGGAGGCTCCTGATCCTCTTCAGCCTCCTCAGCCTCACTGAACTATTCGAGGTGAGATATGAAGAATGGGAGGAGCTCAGCCCAGATATTGCTGCACTACACCAGCTCAGAGGACTGTCTATACACATGTTTCATGAAAATATCAGGAACCCACCGAACCACAGGTCTCTTGCTATGGACTTTCTGTCACCTCTCCATAGGAACACATCCATACATGGGGCCAGAGTTGAGAGATCTATTAGCAGGGAGGACATTGACCAAAACCCGATGAGTTTGCTGTCTGATCTTCAGGAGAATGAGAAGTTCACAGCTTCTGTTATTCAGAAGGAACAGGATTTTGAAGGCTTCTTGGCAGCGATTGATAAACAGAAGACACAAGATGTGCTCCTGAGTGCTTTGGAGATCTCACACAGCTACAGCCAAAAACTTCTGGTCATGACCGACAAAGAAAAGTCAACAAATGACAGAGTCCAACAGGAATACAGCATGGATCCTCATTACTCAGTTATAGTCAGCAACGAATGCCTGTTCAATGTCTCGTGTGTACCAGAAGCAGACAGCTATACCTTGGTGAAAATATTTGGGAGTGTTTCAGAAGATGGACAAACTGTGTCTGGCCTTTCTGGCTCTTCACTCGCAGAGCTGATGTTGAAACCATCACTGGAAACTGCGCCCGTGTTCTCTCTCGATGGAAACACAACCAAAGACTTCCAACATAACTTAATTCGAGTTTTTACGGCCCGTGGCATCACAGCAGTCCTAGAAACAAACCAGGAGAATCACCAGACTTACCAGGTCATGAACCAACTTGAAGAAGTTACTGGATACCAAATTCCACAAAGGCCGGTTGATCACAGCACCCAGTACGACCACCAGCAGATCCTCATCCTGGAAGATGACCCTGTTGTCAGAAAAGCTGCTACGTATCTTAATGAGAAGCATCCAACGGTTTCCTCTGTCTACGTTCTTGATGACAACCAAAGACCAGTACTGATCCGAGGTGACTCCGTGCCTCTGACAGAGGACAGCCGGCTGGTGCTGGTTGGCCACGGCAGGAAAGACAACTCAGGAGAAATGAGACTGGCAGGGTACGAAGTGCAAGAAGTCTCCACAATTATTAAACAAACCTCCAGGGATTccaataaaattaaaacaataactGTGGTGGCCTGTGACGTCGGATCAGATAAAGCATTCATTGAAACGCTGCTGAAGGATCTCCATGACACCGCCGGCATCGAGACAGAGCTGCACATCAGGGACGCTGTGCTCCAGGTcagacacacaggagagaaaatcACCCAAGAGATCACTAAGGATGGAGAGCAATGGAGACATGAAGATGACAGCAAGAAAGTGGTCGCAACCCTCGACAGGAATGGAGATGTAATTATTAGAAATGAGCCCGGCAGTAAAGGAAAGGAAATCTTTACCGCTGAAAGAAACTTTCTAGGtccaaaaaaaaaccattttctGGTCTACAGAGACAGCTGGCCAGATGAGCCAAGGAGATTTATTACCCAGAATGTTTTTGGGGAGGATGCTGAAGTACATAAGGCTTGTGATGAACTTGAAGCTCTATCCTGGGGATTCTTTCACAACGAAAACATACCCGCTCCAGAAAAAATTAAGATTAAAAACTTGGATCTAAAAGAGTATTATttatcccaaaaaaaaagagttaaaaatgaaaaaacgaGACAGTATGAGGAGACAGGGGAGGTAGAgaagataaataataaacaaaaagtaaaagataTTCTTTCCAACTGTTATGAGATTAAATCAGGAGAAGATATCAGGAATGTAATCCGTCACTATGCAAAGACCGGAGAAGATGAGGTTACATACCTGAAGGTCAATGACTGGATATTAGAGGTTAATCCTAAATATCTGTATGTTGCTCCAATCGGAAAAAAGCTTGACAACAATGAAAGAGGAAATGAACAACAAGTTAAGAAATGTATTGAAGATCAGATAGGAAAAGAAAGTTACTCTAAAATACGAGAAggaattaaaacagaaatgggCCAGAATGACCCAATAAAAGGATACGCTCAATATGTGGAAGGTATTTTTTGTGGAGAGCCCACAACACCTCGCCTGCCGCTCCCCACTGAGGCCTGGTGCACCACATATTTCACTGCATCAGTTATATCTGAATCTGCTAGAAACTTCCGGACATTTCCTCTGACTCTCATGGCCCTGGATATGGTCCAAAGCACAGACAACAATATCAAAGAGAATGGACTGAACTTTCTTTGGGAAGAACATTCAATGGCAAGAGGAGGTTCTTGGATTGACCCAAGCAGGCGTGGATTTAGTGGCTCAGCCGACTATGAAGTTTCCAGCAAATCAAAGAATTACTTTAATCCTTCGACTCCTGAGCAATTAATGGATAATCTTAAATATCTTATAACAAAGGAAGTCCAACTGTATAGTAGGTGGATTCAAAAGGAAGGAGGAAATAATCCGTATCAGATATTGGATATCGCTAAAAACAAGTACAGGATAACTGAACGTAATTCAGTTCAGGATTACaaaacattcacaaaaaaattagATAACAGCGACTATCCAGCATCTGGTGGATTAGGAGGCTTCAATGACGGCCACGTAACATCCCAAGACTTAAAATCTTCCTCCGAGTTGGAAAAGTCCTTCAAACTTGAATCGTATTACTCCAGGCAGAGCGTATTAACCGCTGAACAAGTCCACAGtcagttaaaggcaaaatatggtGAAAGTCTGGCAGGGTTGCAGGTCCAGGAGGGCAGCGCCAGAATGGAGAACGAAGAGTTTGTGTGTCATCTGTTAGACGGTGCTGATGCTAAACCTGTTGAGTTTAGGGCTAAATTATCTCCGGAGAGTCAACGCTACTATGAAACAATGTCAGAGAGCATTGAAACAGCAGTTCATGACATGGAAAATCACGGTTCAATCTCCTTCCATCAAGGCAGCAAGTACGTAGAGCACGCTGGGCATGCTGTTGGGACGCTGGGCCTCATGCTGGGGCTGAAAGGAGCTGTTCGTGCTTTTGAACAGGGTGACTTTAAAGATGCCGTGGTGGGGTCTCTACAAACGGCTCATGGAGTGACAGCTATGACATCGTCTGTTATTGCAAAGAAAGCTTTGTCCTCAGAGGCCAGAATGGCCAAAGCTGTAACATCGGTCATGAAAAGCCCTGCAATGAAGGGTTTTACGTCAGTTATACCAATAGTGGGAATTGGATTCGGGATATACAATCTTGAACAAGATTTGGAGAGAGGTGATGCGCTGGGAAACATCGATGCTGCCTTAGATGGTAGTATGGTTGTTTTAGATGTTATTGAAACTGCTCAGCCTGAACTGGTCCCGTTGATAATGCCTATAAACCTGGCTTTATCCGTAGTCCGGATGGTCAATGATGAAATTTATATGGGCATACAGAATGAGCTAAACAACCTCCCGAAAGATGCTGGAGTTCTGGAGAAACTGGGGGCCGTTTCTTTAGGCTTTCTATATGGGATTCAGCATTTTGGAATTAGTGTGGCGAGTTTCTTTTACGATTGGCATTACGATGAAATTGAGCAGGGAAACAGACTTGTTGCACAGATATCAGACTATAACAAATATTACAAAGTTACAAAGCAAAAGGATGGAACGAGCACCGTTGATTTTAGCGGTGGCGACTCTTCTGGGAACGGAGGAGGGGTTCACTTCTGCCTCGCCGACCAGGGTCCGTCTGAACTCTGCATGGACTATTTTGTGTCTAGTAATGAGAGTTTTGGGAAAAGGTGTTGGCAGATTGATACACAGGGAAGCAAAGATATTATTCTTGGCCTTGGAGAGTCAAAGAAGTTAGAGTACATGACACTACAGAAGAAAATACTCTGGTTCATACCAGCCGGCTCTGTGACGGTGGTTTCAGGTTATAAAGCTGTACCAGAGTCAAGGTTTGGGGAATACAAAGGAAATAGAGATTCTAATCGTTTTTTTGCAATTCAGAAAGCAGAGGATGAACATGTGATTGAAGTCATGTTAAGTTACTATTACAGGCTTTATGGTGAACCAGGTGATGACATATTCTTCCTCGGTCCACAGAGAAGTTATGTTGAAGGATGCGGAGGAAAAGACACGTACATTATTCCTAAAAATGGAGGGAAAACAGCCATTAACAACTACGATCCTTCCAAAGCACTAGACACTCTTCATTTAAGTGTTGATTACAGTGACATTTCTGTGTCTAAATCTGGAAATGATGTTGTGTTAATGTATGAGGGAAGTCACACTGTGACCATAGAAGGATGGTTTTTAGGGGAACCGTATCGTCACATGAACATGATGTCTGGAGACGGAGTCTTGTTTGAGATTTCCTCTGTCGTGGTTTCTTCTGTTCAGCTGATGGCCGTAGGGATTAACAAGATGTTTAGCTCTAGTGGTGGATATGTAGATGCATCCCAGCCACTTTTAAGCACAGTTACAAACATCGTTGGATCTCAGGGTACTGATTTCCTCTATGGAAATGGAGAGAATAATATCatagatggaggaggaggttatGATTGGTTGATAGGCCGTGAAGGAGAAGACATGTACATAGTGAAAGTCAGAAAACAGTCTTTAGTGTCGATTATAAATTACTCCAAAGACACTAAAACAGACCTGGCCATAATAGAAGCAAACCTTCACACTTTTAGAGTGGAAGTAATGGATGACCATCTTTTTCTGAACGCTTTCCATGACAACACATCCGTCAGTGTGGTTTTAATGAATTGGTTCAGATCAGCAGCAGACAGACATTTGTTTGTTGTCACAAAGGATTTGATCACTTTCACAATCTCAGATAACAAGGCTGACTGCCTGGACAGAGACCCGTTCACCAAGTGTATTAAAAGTAGCAGCATCGACTACAGCAGCTCGCCATCTCCTCTGTTGGTTGACCTTCAGGAGGACGAGACTTTTAGCATTGTGATGGAGGTTCACGGGTCAAATTTCAACGACGCAATCAGAGGGAACAAAGAACACAACGTTATTGTcccaggaggaggagatgattTCATCCAgggtagaggaggagaggactGGTACGTTATCACGCCGGGCCAAGGAGTAAAAACCATCAACAATCAATCTCCAAATCTAGCCTTGGATATTCTCTTTCTGGAAGAAGAATACGAGAACATAATGTGTTCTTGTGAAGGGCAGAGCATCATCATTTTGGTACATGGTAGAAAAGATGTTATTTTACAGAACTGGTTTGATTCAAAGTTTCATCAGCACCTGCAGATTAAAACCAGTGATGGAATAACAGCTGGACTGATGACCAACCGCAGCAGCTGTGATGACTTGTTAATGTTCCCCGTAACTATTGATTATAGAAACCAGAAACCTGAACCACTTAATTCGCTCCAAACACATCTCCAGAAACACTCAATTAGTGTAGAAGATGAGTCTGAACACGAGTGTTTCACATATAGAAGAAATAATTCACAGATTAAGCGAGTCTTCTGTGGCCTTCAAGGCACAATGATGAATATGAATAATCATGATTCAGTAAAAGAAATGTACGGTTCCTCAGGTTTCGACATCATGGTTGGGAACAGCAATGAGAATCTGCTTGATCCGTACACCGGAGGTGCCTTGATGTTTGGAGGTGAAGGAAAAGACACTTACGTAATCAAACAAGGATATGGAAATGACTCAGTGATCGATAACTTTGCAGAAGATCAGAATATTGATACTGTGTTGGTTGACATGGATTATCTTCATGGCAGTCAAGTCACACTGGACTCATCAACAGAAGATCTGAAAGTGACGATCACATCAGAAGGGGAACAATTCAAATTCACTGTGCTCAACTACACCAATGGTTACCAACATCAGCACTTAGAATTTCAGAGCTCTGACGGAGtgaattttaaattgaaatcacTAAACTCAACCGGAGATGTCGCTTTTTTTGACACTGAAGCTTTCAAAGTGACTCTGAAACAGCTGCAGGTTGACTGCCGCTTGGATCTCAACTCTCAGAGAAATCTGTCAAAGGTCCACACGGTGCAAGGCTGTCCCTCCCAGTCCAATAACATATTAGGTAACGATCAAGACAATGCTCTGATTGGTGGGTGGAAGGATGACGCCTTGGAAGGAGGCGCCGGAGATGACACGCTGATCGGAGGGAACGGAGACGACATCCTGATTGGTGGCTTGGGAGACGACACTCTTTATGGCGAAGACGGAAATGACACTATGATGGGAAACTCTGGCCAGGACGTCTTCCTTCCCGGACCAGGGGCCGATCTGGTGGACGGGGGTCCTGGCAGAGACACGGTTGTGTACCGGGGCGATCATGACACAGGTAAAGGAGTTTATGTCAACCTGCTGACGGGACAAGGCCGCTACGCCGATGCTGAAGGCGACGTGTTGAAGGATGTGGAGATAGTCATCGGCACCGTCTACTCTGATATCTTGGTGTCCGGTTACGAAAGTTCTCTTCTCAAAGGCTCGGACGGCAATGACATCTTGGTGTCGACCGGTGGTGATTACCTGGTTGGAGGTGATGGAAATGACATTTACATGTTGGCTTTCAACAACGGTTCAGTCACGGTTGATAACTGTGCCAAAGACAACGCTACAGACGTCTTGTACATGAGCTCACAGTCAACGCCGCCATTTGACTGCCAACTTTTGTCTGACAGAGATCTCCTGACTTTCTTTGGATTTAACCAAACTACAGTTAAAATTACACTGCAGGGCTGGATCAGTGATGAGAATGAATGTGGTCATTTGAAGTTGGTTTTTAGAGATCAGGAGGTGTCGGTGGACCGGCTGCTGCAAGAGTGTCAGTTAAGACAGAAGAAATCAGTTTGGTCTCTAGTCATAGAGATAatttatttcctcttttttttcattttttcagttttcataAGCAGAACATTAGTTTTAAGggcaaaacaacaaaagaaacgGGAACAAACAGATGTTGATGCAGAATCAGTTTCTCTGCTGGCTGATGAGGAGAGTTACTTTAAAAGCAAGTACACAGTTTCTGCAAGGCTGGATCAGTGATGAGAACGAATGTGGTCATTTGAAGTTGTTTTATAGACATCTGGAGGTGTCGGTGGACCAGCTACTGCAAGAGTGTCAGTTAAGACTATTTAGGAAATGTCATCTTCCTCTTACTTTTGGcaaacaagcagaacataatTTTTAAGGGCAAAATAACAAGAGAGAACTAAATGTTGAAGCAGTATTAGTTTCTATGCTGGCTGATATAATGTAGAGTTTAATCTTGAAAAGCAAGGACACAGTTTCTGAATTTCATTGATCATTTGTCATTTTATCTTAACTAATGCCGTGCCCTTTCAAACGTGTCTGTTTAGGACTGATTGTTTGGACTcctgtcttgctgcttgtagctttctccagaaccattgtaccccaaaatgacttaaagAAGGTACACAAAGTAACCCACTGTGTACTATTAGGCTTgttttagatgagctgcgcctcGCCCCCTGCTGGGTGGTGACAAAACGCTGCGGTCAAGTAGGACAGTTTCAGCTTTCAGTCTGAACAGGAATTTACAGAAACACTCACTTCCTGTTAAGTCTGATTCAGATCTATTAAAATGTTATCCTACCCATATATCCGCTTGTTTAGATtctgacagagtagctgttaaAACTCTGCACGCAATCTGCTTCTGATGTCAATaaacaacatttaaacaaagtaTCTTCAAATATCAATCAGAAACTCTCCAAATCTAAAATAATGAAAAGTTGATATAAAACCTCATAGTGCATACCTCTTTGATCTTATGAGGTCATTGATGCCCATTTGCAGGATCAATTTGGACCCAAATCTatcgattctgcgcaggccTTGCTGATCTCCAACAAACCTGATGACTTACTATCGTTAACaatttaacacttcagcagaaGTATTCATTCTCAGCATCGGTCAGGTCAGTTCCACAGTTAACTTTAAAAAGTTTTTGTGTTGAAACTCCATCAAAATTGAGCTACTGCCTCACTGGGCACCCAACAATACACACGgcaagtgtgaagtagatcgGATGAACAGTTCTCGAGATATGTAGAGGAcaacgcaccacacacacacacacacacacacacacacacacacacacacacacacacacacacagacatacacacacacacagagacacacacacacacagacacagacacagacacacacacacacacacacacacacacacacacacacacacacacacacacaagctttaTAGTTAGATTTATCATGTGTTGTTTATGTAAAACATTTAGTGAATGACAAACCTCTTCTACTTTAAGGGCACAGTGTCTGATTTGGATTATTTAGTAATCTATTATGTTGaggaaaatatataaaatgaaaacaatcttATTATAAACTACATATCGTGTTGTGATTGTAATGTAGCcaaacaaaaactgtaactgtactcaaatgtttttataatcacATGGATTGTTTATGCTTTGTTCATGGAAATAAAATCATCATCATGCAGAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005576 extracellular region cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802433.1 True 8566 mRNA 0.43 7 41432594 41454486

Neighbor

gene id symbol gene type direction distance location
LOC120560235 NA coding downstream 70824 41358296 ~ 41361770 (-)
LOC120560207 NA coding downstream 86267 41339172 ~ 41346327 (-)
LOC120560225 NA coding downstream 128837 41299154 ~ 41303757 (-)
LOC120560210 NA coding downstream 155408 41271917 ~ 41277186 (-)
LOC120561018 NA coding downstream 631899 40799599 ~ 40800695 (-)
LOC120560221 NA coding upstream 34143 41488629 ~ 41496229 (-)
LOC120560202 NA coding upstream 46626 41501112 ~ 41513459 (-)
LOC120561099 NA coding upstream 83039 41537525 ~ 41548904 (-)
LOC120560239 LOC104917865,LOC103367618,LOC107092737,LOC102234380 coding upstream 117658 41572144 ~ 41582352 (-)
bag4 NA coding upstream 134435 41588921 ~ 41596910 (-)
G68989 NA non-coding downstream 144849 41134541 ~ 41287745 (-)
G69004 NA non-coding downstream 180506 41227888 ~ 41252088 (-)
G68987 NA non-coding downstream 192159 41158429 ~ 41240435 (-)
LOC120560188 NA non-coding downstream 210135 41220248 ~ 41222459 (-)
G68990 NA non-coding downstream 217598 41179561 ~ 41214996 (-)
G68911 NA non-coding upstream 29571 41484057 ~ 41552742 (-)
LOC120560251 NA non-coding upstream 63780 41518266 ~ 41520540 (-)
LOC120560253 NA non-coding upstream 66084 41520570 ~ 41522489 (-)
G69032 NA non-coding upstream 128024 41582510 ~ 41598954 (-)
G69034 NA non-coding upstream 135756 41590242 ~ 41590877 (-)
LOC120560231 NA other downstream 30693 41319196 ~ 41401901 (-)
G68985 NA other downstream 355129 41076005 ~ 41077465 (-)
G68952 NA other downstream 481987 40924074 ~ 40950607 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other downstream 1101899 40313369 ~ 40330695 (-)
LOC120560061 NA other downstream 1405851 40000006 ~ 40026743 (-)
G68897 NA other upstream 298050 41752536 ~ 41829133 (-)
G68907 NA other upstream 300386 41754872 ~ 41782162 (-)
G68883 NA other upstream 382061 41836547 ~ 42073980 (-)
G68923 NA other upstream 474002 41928488 ~ 41929179 (-)
rnf34a NA other upstream 643841 42098327 ~ 42107122 (-)

Expression


Co-expression Network