LOC120560194


Basic Information

Item Value
gene id LOC120560194
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42873897 ~ 42958273 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802438.1
ATTCTTTCAGCTGGAACTAAGCAACAATGTCTTCAGTTGAGTGTTTGAGAGAGTTTGTCACCGAGCgactaactgctgctgctgaagaaatattccgagttgttgaaaaaactaTCGTCGAGTACGAGGAAGAGATCGCTCGGCAGCGCAGACTGTTGGATGGCGTTTGGAGACCAGAAATCAGGTTACACAGGATAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCGAGAGGACCCAGAGCCTCCAcagattaaagaggaacaggaggaattGTGCATCAGTcaagagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGAATCAGAAGTAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACCGCAACAGCGTAGACAAGACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACCGATTAAAGAGGACCAGGAGGAACTGTGCATCAGTcaagagggagagcagcttgtaCTGAAGCAGGAGACTAATACCTTTATGTTGACTCCTACTTATGAGGACAGGGACCACAGTGAAGGTCAGGCTCTGATCTTCAATCCTGACGATGACGCTCTCATTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTCTAACCTCTGTGGAATCAGAAGCAAACAGTGACCACCAGCTCCCCTCTCACAACTATCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACAACGCAAGAGCAGAAATCTCAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggtcCTCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTTGTATCAGAAGCAAACAGTGACCACCAGCTCCTCGCTCCCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGTATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAAACAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTCTAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCTTGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAAAAGGGACGACGCAAGAGAAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTTtgtaaggaggaggaggttctATCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGTCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGCACCAGtaaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGAATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCTCATGAAACTGAAAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGAAGAAGTCACAGTAACAATGTAGTAAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGCatcagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTGAATCCTCATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGTGTCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTGTCATCAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCGGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAAACGACGCAAGAGCAGAAGTCACAGCAACATCGTAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCCGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCCCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGATGTAGTCGTAACTTGTTGGTCCATGTGAGAagaatccacacagAACTCCCACAACAACATGGCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTCTAACCTCTGTGGAATCAGAAGTAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAAAACTAACGTGTCAGAGATTCATCCTAATACTCAAACAGGTAAAAAGTCTTTCATATGTGAGACATGTGGGAAAGACTTTAAGTATAATTCAGCATTGCAGACACAcctgagaatccacacaggtgagaagccttATTCTTGCAAATCATGTGGAAAAGATTTCAGACTTAAGGATGTTTTTAATGtccacatgagaactcacacaggagagaagccgtatGTTTGCAAGACTTGTGGGAAAAGATTCTGTGTCACTACAACATTTAAAAGGCATATGAGAATTCACACAGGTGAGAAACCATATCCTTGCAAAACATGTGGAAAAGAGTTTCGGCAAAATAGTTACCTGTTGATCCACATCAGAAGAgcccacacaggtgagaagcccTACGTTTGCAAGACCTGCAGTAAAAGATTCTGTGATCCTTCAGACTTATTAAGGCATATGAGAattcacacaggtgagaagccatATTCTTGCAAAACATGTGGAAAAGATTTCAGATTTAATGGTGCTTTTAACGtccacatgagaactcacacaaGAGAGAAGCTGTACGTTTGCAAGACCTGCGGTAAAAGATACCGTGACGACTCAGCATTACAAAGGCATATGAGAATACACACAGGCGAGAAGCCATATTCTTGTAAAACATGTGGTAAAGATTTCAGACGTAAGGATGTTTTGAACATCCAtttgagaatccacacaggtgagaagccgtaTTCTTGTAAAACATGTGAAAAAGGGTTTAGGCGTAGTAGTACCTTGTTGGTCCACATGAGAAGAGCCCACACAGGTGAGATGCTGTACATTTGCAAGACTTGCGGTAAAAGATTCTTTGACGCTTCAGGTTTAATGAAGCATATGAGAACACACAGAGGAtagaatctaatctaatcttgaTCCTTTGAATTTTGATTATAAAGTTCTAGTGGTTCATGGTCAAAACTGACAAGAACCCTCAGAAGTGAGGAGCAACATTTTTGCAGCAATTGTGGGAAAAGTGACCTGAGGATCAACATAGACAGGAGAAACCATCCAGCTGAAACTCTCGTAGAGACCTGTTGAactgaatgaaatacttttacagTAGTTACATCTCTGATACTGAAtgttaaatattttgttaaatgaaGATGAGATGTCATTTTATAGGGTAAAGTTTCCCTTTGTATGACTGGTTTATTCATATTTCTGTTTGCCTTTTTTATACCCTGCCTTTTTCTACTGACCAGATTCTGAccaaatgttttgcatttttttttaat
>XM_039802439.1
ATTCTTTCAGCTGGAACTAAGCAACAATGTCTTCAGTTGAGTGTTTGAGAGAGTTTGTCACCGAGCgactaactgctgctgctgaagaaatattccgagttgttgaaaaaactaTCGTCGAGTACGAGGAAGAGATCGCTCGGCAGCGCAGACTGTTGGATGGCGTTTGGAGACCAGAAATCAGGTTACACAGGATAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCGAGAGGACCCAGAGCCTCCAcagattaaagaggaacaggaggaattGTGCATCAGTcaagagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGAATCAGAAGTAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACCGCAACAGCGTAGACAAGACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACCGATTAAAGAGGACCAGGAGGAACTGTGCATCAGTcaagagggagagcagcttgtaCTGAAGCAGGAGACTAATACCTTTATGTTGACTCCTACTTATGAGGACAGGGACCACAGTGAAGGTCAGGCTCTGATCTTCAATCCTGACGATGACGCTCTCATTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTCTAACCTCTGTGGAATCAGAAGCAAACAGTGACCACCAGCTCCCCTCTCACAACTATCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACAACGCAAGAGCAGAAATCTCAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggtcCTCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCTGTTGTATCAGAAGCAAACAGTGACCACCAGCTCCTCGCTCCCAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGTATGGAGACTCAGGACCAACTAGAAATGCAGAGCCAGAAACAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTCTAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCTTGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAAAAGGGACGACGCAAGAGAAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGCatcagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTGAATCCTCATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGTGTCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTGTCATCAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCGGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAAACGACGCAAGAGCAGAAGTCACAGCAACATCGTAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCAACATGCCAGTTATAACCTCCGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCCCAACTCCCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGATGTAGTCGTAACTTGTTGGTCCATGTGAGAagaatccacacagAACTCCCACAACAACATGGCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTCTAACCTCTGTGGAATCAGAAGTAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAAAACTAACGTGTCAGAGATTCATCCTAATACTCAAACAGGTAAAAAGTCTTTCATATGTGAGACATGTGGGAAAGACTTTAAGTATAATTCAGCATTGCAGACACAcctgagaatccacacaggtgagaagccttATTCTTGCAAATCATGTGGAAAAGATTTCAGACTTAAGGATGTTTTTAATGtccacatgagaactcacacaggagagaagccgtatGTTTGCAAGACTTGTGGGAAAAGATTCTGTGTCACTACAACATTTAAAAGGCATATGAGAATTCACACAGGTGAGAAACCATATCCTTGCAAAACATGTGGAAAAGAGTTTCGGCAAAATAGTTACCTGTTGATCCACATCAGAAGAgcccacacaggtgagaagcccTACGTTTGCAAGACCTGCAGTAAAAGATTCTGTGATCCTTCAGACTTATTAAGGCATATGAGAattcacacaggtgagaagccatATTCTTGCAAAACATGTGGAAAAGATTTCAGATTTAATGGTGCTTTTAACGtccacatgagaactcacacaaGAGAGAAGCTGTACGTTTGCAAGACCTGCGGTAAAAGATACCGTGACGACTCAGCATTACAAAGGCATATGAGAATACACACAGGCGAGAAGCCATATTCTTGTAAAACATGTGGTAAAGATTTCAGACGTAAGGATGTTTTGAACATCCAtttgagaatccacacaggtgagaagccgtaTTCTTGTAAAACATGTGAAAAAGGGTTTAGGCGTAGTAGTACCTTGTTGGTCCACATGAGAAGAGCCCACACAGGTGAGATGCTGTACATTTGCAAGACTTGCGGTAAAAGATTCTTTGACGCTTCAGGTTTAATGAAGCATATGAGAACACACAGAGGAtagaatctaatctaatcttgaTCCTTTGAATTTTGATTATAAAGTTCTAGTGGTTCATGGTCAAAACTGACAAGAACCCTCAGAAGTGAGGAGCAACATTTTTGCAGCAATTGTGGGAAAAGTGACCTGAGGATCAACATAGACAGGAGAAACCATCCAGCTGAAACTCTCGTAGAGACCTGTTGAactgaatgaaatacttttacagTAGTTACATCTCTGATACTGAAtgttaaatattttgttaaatgaaGATGAGATGTCATTTTATAGGGTAAAGTTTCCCTTTGTATGACTGGTTTATTCATATTTCTGTTTGCCTTTTTTATACCCTGCCTTTTTCTACTGACCAGATTCTGAccaaatgttttgcatttttttttaat

Function

GO:

id name namespace
GO:0007224 smoothened signaling pathway biological_process
GO:0015630 microtubule cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802438.1 True 4861 mRNA 0.46 9 42873897 42958273
XM_039802439.1 False 4336 mRNA 0.46 8 42873897 42958273

Neighbor

gene id symbol gene type direction distance location
LOC120561115 NA coding downstream 19555 42822405 ~ 42854342 (-)
LOC120560237 NA coding downstream 51252 42819874 ~ 42822645 (-)
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 211878 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 602686 42262425 ~ 42271211 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding downstream 617013 42241736 ~ 42256884 (-)
snapc4 NA coding upstream 147069 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 343346 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 350075 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 522688 43480961 ~ 43528118 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 599444 43557717 ~ 43582312 (-)
G69184 NA non-coding downstream 54563 42780818 ~ 42819334 (-)
LOC120560255 NA non-coding downstream 102464 42768403 ~ 42771433 (-)
G69189 NA non-coding downstream 169905 42696173 ~ 42703992 (-)
G69175 NA non-coding downstream 217975 42653635 ~ 42655922 (-)
G69179 NA non-coding downstream 222491 42650291 ~ 42651406 (-)
LOC120560258 NA non-coding upstream 12193 42970466 ~ 42971625 (-)
G69250 NA non-coding upstream 48586 43006859 ~ 43096619 (-)
G69254 NA non-coding upstream 62859 43021132 ~ 43022838 (-)
G69258 NA non-coding upstream 79274 43037547 ~ 43038477 (-)
G69266 NA non-coding upstream 131368 43089641 ~ 43091900 (-)
LOC120561114 NA other downstream 64275 42663363 ~ 42809622 (-)
G69140 NA other downstream 336939 42497565 ~ 42536958 (-)
G69105 NA other downstream 741316 42130611 ~ 42132581 (-)
G68921 NA other downstream 757636 42107630 ~ 42116261 (-)
G69229 chek2 other upstream 11811 42970084 ~ 43014065 (-)
chek2 chek2,LOC102215705 other upstream 43982 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 117957 43076230 ~ 43099165 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 185115 43143388 ~ 43178989 (-)
G69249 NA other upstream 252746 43211019 ~ 43218894 (-)

Expression


Co-expression Network