LOC120560203


Basic Information

Item Value
gene id LOC120560203
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42078586 ~ 42094518 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802470.1
TTGAGTTTGGTTTTCAGCGCGAGGACACACAGCTACGGTGGCGacagtttagacaccaaaactacccgttaagtttaggaaacagatcgtggtttggattaaaactcTCCCGAGGACCGAACACGCGCGTCCTGGGGCGAAATATTAAATTTATACTTTTATATTAGCCGAGATTTAGCGTAATTTGGCCATTTCAAGCCATAACCGCGAGCCAAAGGAGCCGACTCTGCGCGAGCCCGGGAAAGGTTGCCTGAGTCCGGGATTCAGATGGAGGGCAGCGCCGCTGTCAGCTCCACGGCAGCCCGGGAAAGGTTGCCTGAGTCCGGGATTCAGATGGAGGGCAGCGCCGCTGTCAGCTCCATGGTTCTGTTCGAGGATGAGTCGGTGGATGTTCGGTACGGAACCGGAGCCCAGCTCCAGCTGTCGCCGTGTGGCTGTGAGTTCACGCTGCTGAAACCCGCTGACGTCTCCGGACATCCTCCGAGACCCGCCGAGAGATTCCGACATCCTCCGAAACCAGCCGAGAGACTCCGACAGAGGACCAGGTTCACCGTCAGCTCTTACAAGGAAGTTCTGGTCGCTGCGTTGGCGTTCAGGAATAAATACGCTCGCCGCCCGTACCTACCGGAGGAACTCGTCCCCGCCAAACACACGAAGCCTTTCTTCAGCGTGGACTCAGACGTGCGGTGGCCTGAGTGGTCTTCCTGTGCGGCTGAACTCGGGCCTGGAGGCGAGACTATCGTCAGGTCTGAGGGGGGGCGAGCAGCGCTGATGCTGGCGCCATCGGGCGAAGAATTCTCCGTGGAGTTTGCGTGCAGCCTCAGTCAGACGGCGAGCCGATACACCGACGATGAGAAGCCAGAGACGGTGTACCGATCCACCACGGTGGTCCAGCATCACTCCGTCTGCTCTGTTCCCTCCGTCTGGTCCTACCCTCTCTGGCTGGCTCGCCAACTCCACGCCTCTCGTCTCTGGCTGGCTCGCCAACTCCACGCGTCTCGTCTCCCTGAGCCAGAAGACGTCCCTGCAGACAGAGACGTAAACCCGCTGGACATTTCCACCGTAGAGCGAAGCTCTCGCCTCCCAGAGGCGCTGCCTCTCACGTGTTCATCCCCCCACTGGCACAGGTGGAAAGTTAAAGATGTCGTTTCAGATGAAGATCTTCCAACAGAGCTGGTGAAGGTGATGTGGTGGCACGGAGTCACGTACAGGATCCTGAACGGGACGGTCCCTGTCGTGGAGGTGTCCCCCGGAGATGGATCAGTCCTCCGCTCTAACGGCGTCCTGAATACTTATTTTACTCATCACAGACCTGATCTCCCATCAGGACGGGTGAACGAGGTAACGTACCACGTGGACACCCTCCCCCCCGACGTCCCGGGACAGCTGTTCTCCGTGGGGGCTGTCGTGAGGCGCGCCAGCAGGATCCTGGCGTGCTTCACCGAGGCCAGGCGGTCGCTGGCGCTCCCCGCCACGCCCAGCTGCCTCACGGAGCTCAGAGAGGGGCGACATTTGTCTGGACCAGTGAGGATGGAAGAAGGTCTGTCCAGTCCTGTTCCTGTTGAGCAGGACGTCCCAGACACGGTAGAGAATCGGTCGGATCTTGTAGCTGCAGAACTGGAGAAGATAAAAAGATTCAACTATCCTGGGGGCTCTTTAACCTGGTGGGGGCTCTTTAACCTGGTGGGCCCAGTTCTTCTGGAGAACAACCACCTGCTGAGGAACCAGACAGGAAGTGTGAGACAGGAAGCTGTCGCTGCAGACGAGGAGACTCCCGGAGCGGTGAGCGAGCGCTGCGTCGCCGAGGCTCTGCAGAGAACTTCCAGAACCATCCGAGACATCGACGCTCTCATATCTGACTGCAAAGAGCCCTGaatggggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattcggactatattttatatttctagGTCCGACTGAAATAAAGATTTTTCTTCATGTC
>XM_039802471.1
TTGAGTTTGGTTTTCAGCGCGAGGACACACAGCTACGGTGGCGacagtttagacaccaaaactacccgttaagtttaggaaacagatcgtggtttggattaaaactcTCCCGAGGACCGAACACGCGCGTCCTGGGGCGAAATATTAAATTTATACTTTTATATTAGCCGAGATTTAGCGTAATTTGGCCATTTCAAGCCATAACCGCGAGCCAAAGGAGCCGACTCTGCGCGAGCCCGGGAAAGGTTGCCTGAGTCCGGGATTCAGATGGAGGGCAGCGCCGCTGTCAGCTCCACGGCAGCCCGGGAAAGGTTGCCTGAGTCCGGGATTCAGATGGAGGGCAGCGCCGCTGTCAGCTCCATGGTTCTGTTCGAGGATGAGTCGGTGGATGTTCGGTACGGAACCGGAGCCCAGCTCCAGCTGTCGCCGTGTGGCTGTGAGTTCACGCTGCTGAAACCCGCTGACGTCTCCGGACATCCTCCGAGACCCGCCGAGAGATTCCGACATCCTCCGAAACCAGCCGAGAGACTCCGACAGAGGACCAGGTTCACCGTCAGCTCTTACAAGGAAGTTCTGGTCGCTGCGTTGGCGTTCAGGAATAAATACGCTCGCCGCCCGTACCTACCGGAGGAACTCGTCCCCGCCAAACACACGAAGCCTTTCTTCAGCGTGGACTCAGACGTGCGGTGGCCTGAGTGGTCTTCCTGTGCGGCTGAACTCGGGCCTGGAGGCGAGACTATCGTCAGGTCTGAGGGGGGGCGAGCAGCGCTGATGCTGGCGCCATCGGGCGAAGAATTCTCCGTGGAGTTTGCGTGCAGCCTCAGTCAGACGGCGAGCCGATACACCGACGATGAGAAGCCAGAGACGGTGTACCGATCCACCACGGTGGTCCAGCATCACTCCGTCTGCTCTGTTCCCTCCGTCTGGTCCTACCCTCTCTGGCTGGCTCGCCAACTCCACGCCTCTCGTCTCTGGCTGGCTCGCCAACTCCACGCGTCTCGTCTCCCTGAGCCAGAAGACGTCCCTGCAGACAGAGACGTAAACCCGCTGGACATTTCCACCGTAGAGCGAAGCTCTCGCCTCCCAGAGGCGCTGCCTCTCACGTGTTCATCCCCCCACTGGCACAGGTGGAAAGTTAAAGATGTCGTTTCAGATGAAGATCTTCCAACAGAGCTGGTGAAGGTGATGTGGTGGCACGGAGTCACGTACAGGATCCTGAACGGGACGGTCCCTGTCGTGGAGGTGTCCCCCGGAGATGGATCAGTCCTCCGCTCTAACGGCGTCCTGAATACTTATTTTACTCATCACAGACCTGATCTCCCATCAGGACGGGTGAACGAGGTAACGTACCACGTGGACACCCTCCCCCCCGACGTCCCGGGACAGCTGTTCTCCGTGGGGGCTGTCGTGAGGCGCGCCAGCAGGATCCTGGCGTGCTTCACCGAGGCCAGGCGGTCGCTGGCGCTCCCCGCCACGCCCAGCTGCCTCACGGAGCTCAGAGAGGGGCGACATTTGTCTGGACCAGTGAGGATGGAAGAAGGTCTGTCCAGTCCTGTTCCTGTTGAGCAGGACGTCCCAGACACGGTAGAGAATCGGTCGGATCTTGTAGCTGCAGAACTGGAGAAGATAAAAAGATTCAACTTTCTTCTGGAGAACAACCACCTGCTGAGGAACCAGACAGGAAGTGTGAGACAGGAAGCTGTCGCTGCAGACGAGGAGACTCCCGGAGCGGTGAGCGAGCGCTGCGTCGCCGAGGCTCTGCAGAGAACTTCCAGAACCATCCGAGACATCGACGCTCTCATATCTGACTGCAAAGAGCCCTGaatggggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattcggactatattttatatttctagGTCCGACTGAAATAAAGATTTTTCTTCATGTC
>XM_039802472.1
TTGAGTTTGGTTTTCAGCGCGAGGACACACAGCTACGGTGGCGacagtttagacaccaaaactacccgttaagtttaggaaacagatcgtggtttggattaaaactcTCCCGAGGACCGAACACGCGCGTCCTGGGGCGAAATATTAAATTTATACTTTTATATTAGCCGAGATTTAGCGTAATTTGGCCATTTCAAGCCATAACCGCGAGCCAAAGGAGCCGACTCTGCGCGAGCCCGGGAAAGGTTGCCTGAGTCCGGGATTCAGATGGAGGGCAGCGCCGCTGTCAGCTCCACGGCAGCCCGGGAAAGGTTGCCTGAGTCCGGGATTCAGATGGAGGGCAGCGCCGCTGTCAGCTCCATGGTTCTGTTCGAGGATGAGTCGGTGGATGTTCGGTACGGAACCGGAGCCCAGCTCCAGCTGTCGCCGTGTGGCTGTGAGTTCACGCTGCTGAAACCCGCTGACGTCTCCGGACATCCTCCGAGACCCGCCGAGAGATTCCGACATCCTCCGAAACCAGCCGAGAGACTCCGACAGAGGACCAGGTTCACCGTCAGCTCTTACAAGCCTTTCTTCAGCGTGGACTCAGACGTGCGGTGGCCTGAGTGGTCTTCCTGTGCGGCTGAACTCGGGCCTGGAGGCGAGACTATCGTCAGGTCTGAGGGGGGGCGAGCAGCGCTGATGCTGGCGCCATCGGGCGAAGAATTCTCCGTGGAGTTTGCGTGCAGCCTCAGTCAGACGGCGAGCCGATACACCGACGATGAGAAGCCAGAGACGGTGTACCGATCCACCACGGTGGTCCAGCATCACTCCGTCTGCTCTGTTCCCTCCGTCTGGTCCTACCCTCTCTGGCTGGCTCGCCAACTCCACGCCTCTCGTCTCTGGCTGGCTCGCCAACTCCACGCGTCTCGTCTCCCTGAGCCAGAAGACGTCCCTGCAGACAGAGACGTAAACCCGCTGGACATTTCCACCGTAGAGCGAAGCTCTCGCCTCCCAGAGGCGCTGCCTCTCACGTGTTCATCCCCCCACTGGCACAGGTGGAAAGTTAAAGATGTCGTTTCAGATGAAGATCTTCCAACAGAGCTGGTGAAGGTGATGTGGTGGCACGGAGTCACGTACAGGATCCTGAACGGGACGGTCCCTGTCGTGGAGGTGTCCCCCGGAGATGGATCAGTCCTCCGCTCTAACGGCGTCCTGAATACTTATTTTACTCATCACAGACCTGATCTCCCATCAGGACGGGTGAACGAGGTAACGTACCACGTGGACACCCTCCCCCCCGACGTCCCGGGACAGCTGTTCTCCGTGGGGGCTGTCGTGAGGCGCGCCAGCAGGATCCTGGCGTGCTTCACCGAGGCCAGGCGGTCGCTGGCGCTCCCCGCCACGCCCAGCTGCCTCACGGAGCTCAGAGAGGGGCGACATTTGTCTGGACCAGTGAGGATGGAAGAAGGTCTGTCCAGTCCTGTTCCTGTTGAGCAGGACGTCCCAGACACGGTAGAGAATCGGTCGGATCTTGTAGCTGCAGAACTGGAGAAGATAAAAAGATTCAACTATCCTGGGGGCTCTTTAACCTGGTGGGGGCTCTTTAACCTGGTGGGCCCAGTTCTTCTGGAGAACAACCACCTGCTGAGGAACCAGACAGGAAGTGTGAGACAGGAAGCTGTCGCTGCAGACGAGGAGACTCCCGGAGCGGTGAGCGAGCGCTGCGTCGCCGAGGCTCTGCAGAGAACTTCCAGAACCATCCGAGACATCGACGCTCTCATATCTGACTGCAAAGAGCCCTGaatggggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattcggactatattttatatttctagGTCCGACTGAAATAAAGATTTTTCTTCATGTC

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0010948 negative regulation of cell cycle process biological_process
GO:0044770 cell cycle phase transition biological_process
GO:0044772 mitotic cell cycle phase transition biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0007049 cell cycle biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0006260 DNA replication biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:1901987 regulation of cell cycle phase transition biological_process
GO:0046483 heterocycle metabolic process biological_process
GO:1901988 negative regulation of cell cycle phase transition biological_process
GO:1901990 regulation of mitotic cell cycle phase transition biological_process
GO:1901991 negative regulation of mitotic cell cycle phase transition biological_process

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802470.1 True 2059 mRNA 0.57 11 42078586 42094518
XM_039802471.1 False 2008 mRNA 0.57 11 42078586 42094518
XM_039802472.1 False 1969 mRNA 0.57 10 42078586 42094518

Neighbor

gene id symbol gene type direction distance location
LOC120561108 NA coding downstream 31077 42034223 ~ 42047509 (-)
LOC120561107 rictor coding downstream 56229 41938981 ~ 42022357 (-)
LOC120561104 NA coding downstream 196573 41867239 ~ 41882013 (-)
LOC120561103 NA coding downstream 220088 41837626 ~ 41858498 (-)
pold2 pold2 coding downstream 262680 41796261 ~ 41815906 (-)
LOC120561110 LOC104936293,LOC104940908 coding upstream 17230 42111748 ~ 42136339 (-)
LOC120560222 NA coding upstream 80958 42175476 ~ 42179298 (-)
LOC120560212 NA coding upstream 114683 42209201 ~ 42212702 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding upstream 147218 42241736 ~ 42256884 (-)
LOC120560191 NA coding upstream 167907 42262425 ~ 42271211 (-)
G68914 NA non-coding downstream 35922 42039860 ~ 42042664 (-)
G69094 NA non-coding downstream 39121 42038990 ~ 42039465 (-)
G68920 NA non-coding downstream 70248 41943696 ~ 42008338 (-)
G68915 NA non-coding downstream 85095 41988436 ~ 41993491 (-)
G69087 NA non-coding downstream 86164 41956372 ~ 41992422 (-)
G69110 NA non-coding upstream 115420 42209938 ~ 42223138 (-)
G69127 NA non-coding upstream 271511 42366029 ~ 42443845 (-)
G69129 NA non-coding upstream 301563 42396081 ~ 42413217 (-)
G69131 NA non-coding upstream 331234 42425752 ~ 42495934 (-)
G69144 NA non-coding upstream 421322 42515840 ~ 42516752 (-)
G68883 NA other downstream 4606 41836547 ~ 42073980 (-)
G68923 NA other downstream 149407 41928488 ~ 41929179 (-)
G68897 NA other downstream 249453 41752536 ~ 41829133 (-)
G68907 NA other downstream 296424 41754872 ~ 41782162 (-)
LOC120560231 NA other downstream 676685 41319196 ~ 41401901 (-)
rnf34a NA other upstream 3809 42098327 ~ 42107122 (-)
G68921 NA other upstream 13112 42107630 ~ 42116261 (-)
G69104 NA other upstream 18274 42112792 ~ 42114759 (-)
G69105 NA other upstream 36093 42130611 ~ 42132581 (-)
G69140 NA other upstream 403047 42497565 ~ 42536958 (-)

Expression


Co-expression Network