LOC120560207


Basic Information

Item Value
gene id LOC120560207
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41339172 ~ 41346327 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802477.1
TTTTCTGCTGACTTGTGAATGGTTTACTGGCATCCGTGAACAACTTTGCACGGCAAATGTGGCATGATGATCCAAAGGTAGAGTGTAAGGATTGGCGTGCGGCTGGAAGTCACGACGGAAACGGAACATCTCTCTTCATCCTGTCAGTGCTTCTCTGTCTGCTCTTCAACCAGGAGAAGTTCACAATGATGATGCGTGCAGCCGTGGGTCTCTGGGTCCTATCAGTGGTTATCTGCGTGGGCAGAGGCCATCACCATCCCAATCATTTGGGTCACGGCAACGACAAGGCCGGCCAAGACACTGTAGTGAACGGCAGCGCCAGCAGCGTCTCCCTGGTGAACGAAGTAAACCAAGAGTTTTCCTTCCGACTCTACAGGCAGTTAGCAGCTCATGCTGACTCTCAGGGAAAGAATATCTTCTTCTCCCCGGCTAGTGTGTCGACCGCCTTGGCTGCGTTGTCCGTGGGAGCGCAGGGGGAGACTCACCGTCAGCTTTTCAGTGGTCTGGGCTTCAACAGCTCCCTCCTGACGCAGACAGATGTGGACCAGGTcttccagaccttcctccagagGGCCAACAACACATCTCAAGAGGACGGTAGCGAAGGGACCGCGGTGTTCGTGGACAACGGCTTCAAGCCCAAGCCGGAGTTCCTGCAGACCCTGAAGCAGTCGTACCTCGCAGATGGGTTCAATGTGGACTTCACCAACACCACAGAAAGTGCTGATACCATCAATAAGTACGTGGAGGAGAAGACCAACGGGAAGATTGATCAGCTGGTGGAAAACCTGGATGAAAGCACTGTCATGTATCTCATCAGCTACATCTACTACAAAGGAAAGTGGGAGACTCCATTTGACCCCAAGCTCACCAAGCAGGACGACTTCAACGTGGACGAGAACACCAAGGTTCCGGTTCTCATGATGAATCTGGAGGATAGTTTCAAAACCTATCACGACCACGATCTGAACACGACGGTCCTTCAGCTCCCCTTCAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGCAACACTGGAAAACGCCATTGGCCCGAAGCACGTCACCAAATGGTTGAAGGCTATGATGAGACCCAGGGTACTTGATGTATATATTCCAAAGTTCTCCATCAAGACTTCCTACAACCTGAAAGATGTGCTGTCAGAAATGGGAATGACAGACATGTTTGGTGATCGTGCAAATTTGAGAGGCATTTCAGAGGAGGAAAGTCTGCAAGTCTCACAAGTTGTGCACCAAGCTACGCTGGACGTGGACGAGGCCGGAGCCACCGCTGCTGCCGCCACGGGCATTGACATCGCAAGTAATTCTGTCGTCCCTGTGTTGAAGTTCAATCGTCCATTCATGGTCATCATCACTGAACGCAACACAGAGAAAATCCTCTTCTTGGGGAAGATTATCAACCCAACCATCTGATGGATCATGACTCGAGCACAGCTGTTGCATCTCATATAAAGGAGTcagaaaaaattgtgttttttgtctCTTGCTTTATTGAGAGTGTAAACAGTTTTTATATAATCTTTCAAGGTAAAATAATGTAGTGATAAAATATACTTAATActtaactactaataatactTCCCTAAGCATTTGGTATTCATTTATAActgatcagattttaaaaatacaatagagctcaacagtgaccacCCACTTTTTGAACCGCTGTAGTTCTGGGTATTAAAATCCATTATGTAAGTAAAAGTACGACTTCCACAGTGTAaaagtacaagtcctgcattgaaaatgttacttcagtaaaagtctgtaagtatcgtcaggaaaatgtacttaaagtataaaagtacttaatgcagaaaaatcctcacattttggAAACTGGAAACAGTTGATTTCATACGAACTTCTgtcttctacaggagcagaaactttgtttcacagctcaCAGTCAGTTtaccttggatggtttagacattgtggctaataatcaaaatccttgtAGAGAAAGTGAATTGGATTTTTAAACTTGATGGGACAGTGTGAATTCTGTATGTTCGAGGCTGACACTACTCTGAATTGCTGGCTTGAATGTGTAATAAGTAATTGAAGTAGTAGGAAGAGTTGAAAAAGTGAGAATGGGTTTATTTGGTATGAATATTATTGAGAagttaaataatacaaataatgttTGAAAGATATGTTTTTAGAAAAGGCTGACTCAAAGCTGGAAATCGCTTAAATGTGTAAGAAGTAGATAAAGTAGTAAAAGTTATTAACACAACATGGAGAAAGTCCTCTTCATAGGCAAGATTACAAAACCCAACCATCTGATGGAACATCACTTTGTGTTTGCTTGAGCACAGCTTGAGCTCATATAAAGGAgtcagaaaatc
>XM_039802478.1
TTACTGGCATCCGTGAACAACTTTGCACGGCAAATGTGGCATGATGATCCAAAGGTAGAGTGTAAGGATTGGCGTGCGGCTGGAAGTCACGACGGAAACGTGCTTCTCTGTCTGCTCTTCAACCAGGAGAAGTTCACAATGATGATGCGTGCAGCCGTGGGTCTCTGGGTCCTATCAGTGGTTATCTGCGTGGGCAGAGGCCATCACCATCCCAATCATTTGGGTCACGGCAACGACAAGGCCGGCCAAGACACTGTAGTGAACGGCAGCGCCAGCAGCGTCTCCCTGGTGAACGAAGTAAACCAAGAGTTTTCCTTCCGACTCTACAGGCAGTTAGCAGCTCATGCTGACTCTCAGGGAAAGAATATCTTCTTCTCCCCGGCTAGTGTGTCGACCGCCTTGGCTGCGTTGTCCGTGGGAGCGCAGGGGGAGACTCACCGTCAGCTTTTCAGTGGTCTGGGCTTCAACAGCTCCCTCCTGACGCAGACAGATGTGGACCAGGTcttccagaccttcctccagagGGCCAACAACACATCTCAAGAGGACGGTAGCGAAGGGACCGCGGTGTTCGTGGACAACGGCTTCAAGCCCAAGCCGGAGTTCCTGCAGACCCTGAAGCAGTCGTACCTCGCAGATGGGTTCAATGTGGACTTCACCAACACCACAGAAAGTGCTGATACCATCAATAAGTACGTGGAGGAGAAGACCAACGGGAAGATTGATCAGCTGGTGGAAAACCTGGATGAAAGCACTGTCATGTATCTCATCAGCTACATCTACTACAAAGGAAAGTGGGAGACTCCATTTGACCCCAAGCTCACCAAGCAGGACGACTTCAACGTGGACGAGAACACCAAGGTTCCGGTTCTCATGATGAATCTGGAGGATAGTTTCAAAACCTATCACGACCACGATCTGAACACGACGGTCCTTCAGCTCCCCTTCAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGCAACACTGGAAAACGCCATTGGCCCGAAGCACGTCACCAAATGGTTGAAGGCTATGATGAGACCCAGGGTACTTGATGTATATATTCCAAAGTTCTCCATCAAGACTTCCTACAACCTGAAAGATGTGCTGTCAGAAATGGGAATGACAGACATGTTTGGTGATCGTGCAAATTTGAGAGGCATTTCAGAGGAGGAAAGTCTGCAAGTCTCACAAGTTGTGCACCAAGCTACGCTGGACGTGGACGAGGCCGGAGCCACCGCTGCTGCCGCCACGGGCATTGACATCGCAAGTAATTCTGTCGTCCCTGTGTTGAAGTTCAATCGTCCATTCATGGTCATCATCACTGAACGCAACACAGAGAAAATCCTCTTCTTGGGGAAGATTATCAACCCAACCATCTGATGGATCATGACTCGAGCACAGCTGTTGCATCTCATATAAAGGAGTcagaaaaaattgtgttttttgtctCTTGCTTTATTGAGAGTGTAAACAGTTTTTATATAATCTTTCAAGGTAAAATAATGTAGTGATAAAATATACTTAATActtaactactaataatactTCCCTAAGCATTTGGTATTCATTTATAActgatcagattttaaaaatacaatagagctcaacagtgaccacCCACTTTTTGAACCGCTGTAGTTCTGGGTATTAAAATCCATTATGTAAGTAAAAGTACGACTTCCACAGTGTAaaagtacaagtcctgcattgaaaatgttacttcagtaaaagtctgtaagtatcgtcaggaaaatgtacttaaagtataaaagtacttaatgcagaaaaatcctcacattttggAAACTGGAAACAGTTGATTTCATACGAACTTCTgtcttctacaggagcagaaactttgtttcacagctcaCAGTCAGTTtaccttggatggtttagacattgtggctaataatcaaaatccttgtAGAGAAAGTGAATTGGATTTTTAAACTTGATGGGACAGTGTGAATTCTGTATGTTCGAGGCTGACACTACTCTGAATTGCTGGCTTGAATGTGTAATAAGTAATTGAAGTAGTAGGAAGAGTTGAAAAAGTGAGAATGGGTTTATTTGGTATGAATATTATTGAGAagttaaataatacaaataatgttTGAAAGATATGTTTTTAGAAAAGGCTGACTCAAAGCTGGAAATCGCTTAAATGTGTAAGAAGTAGATAAAGTAGTAAAAGTTATTAACACAACATGGAGAAAGTCCTCTTCATAGGCAAGATTACAAAACCCAACCATCTGATGGAACATCACTTTGTGTTTGCTTGAGCACAGCTTGAGCTCATATAAAGGAgtcagaaaatc
>XM_039802479.1
CTTCTCTGTCTGCTCTTCAACCAGGAGAAGATGTCAATGTGAATGAGGAAAGGCTGGTGgcagggtctgaaacgaaagTTCACAATGATGATGCGTGCAGCCGTGGGTCTCTGGGTCCTATCAGTGGTTATCTGCGTGGGCAGAGGCCATCACCATCCCAATCATTTGGGTCACGGCAACGACAAGGCCGGCCAAGACACTGTAGTGAACGGCAGCGCCAGCAGCGTCTCCCTGGTGAACGAAGTAAACCAAGAGTTTTCCTTCCGACTCTACAGGCAGTTAGCAGCTCATGCTGACTCTCAGGGAAAGAATATCTTCTTCTCCCCGGCTAGTGTGTCGACCGCCTTGGCTGCGTTGTCCGTGGGAGCGCAGGGGGAGACTCACCGTCAGCTTTTCAGTGGTCTGGGCTTCAACAGCTCCCTCCTGACGCAGACAGATGTGGACCAGGTcttccagaccttcctccagagGGCCAACAACACATCTCAAGAGGACGGTAGCGAAGGGACCGCGGTGTTCGTGGACAACGGCTTCAAGCCCAAGCCGGAGTTCCTGCAGACCCTGAAGCAGTCGTACCTCGCAGATGGGTTCAATGTGGACTTCACCAACACCACAGAAAGTGCTGATACCATCAATAAGTACGTGGAGGAGAAGACCAACGGGAAGATTGATCAGCTGGTGGAAAACCTGGATGAAAGCACTGTCATGTATCTCATCAGCTACATCTACTACAAAGGAAAGTGGGAGACTCCATTTGACCCCAAGCTCACCAAGCAGGACGACTTCAACGTGGACGAGAACACCAAGGTTCCGGTTCTCATGATGAATCTGGAGGATAGTTTCAAAACCTATCACGACCACGATCTGAACACGACGGTCCTTCAGCTCCCCTTCAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGCAACACTGGAAAACGCCATTGGCCCGAAGCACGTCACCAAATGGTTGAAGGCTATGATGAGACCCAGGGTACTTGATGTATATATTCCAAAGTTCTCCATCAAGACTTCCTACAACCTGAAAGATGTGCTGTCAGAAATGGGAATGACAGACATGTTTGGTGATCGTGCAAATTTGAGAGGCATTTCAGAGGAGGAAAGTCTGCAAGTCTCACAAGTTGTGCACCAAGCTACGCTGGACGTGGACGAGGCCGGAGCCACCGCTGCTGCCGCCACGGGCATTGACATCGCAAGTAATTCTGTCGTCCCTGTGTTGAAGTTCAATCGTCCATTCATGGTCATCATCACTGAACGCAACACAGAGAAAATCCTCTTCTTGGGGAAGATTATCAACCCAACCATCTGATGGATCATGACTCGAGCACAGCTGTTGCATCTCATATAAAGGAGTcagaaaaaattgtgttttttgtctCTTGCTTTATTGAGAGTGTAAACAGTTTTTATATAATCTTTCAAGGTAAAATAATGTAGTGATAAAATATACTTAATActtaactactaataatactTCCCTAAGCATTTGGTATTCATTTATAActgatcagattttaaaaatacaatagagctcaacagtgaccacCCACTTTTTGAACCGCTGTAGTTCTGGGTATTAAAATCCATTATGTAAGTAAAAGTACGACTTCCACAGTGTAaaagtacaagtcctgcattgaaaatgttacttcagtaaaagtctgtaagtatcgtcaggaaaatgtacttaaagtataaaagtacttaatgcagaaaaatcctcacattttggAAACTGGAAACAGTTGATTTCATACGAACTTCTgtcttctacaggagcagaaactttgtttcacagctcaCAGTCAGTTtaccttggatggtttagacattgtggctaataatcaaaatccttgtAGAGAAAGTGAATTGGATTTTTAAACTTGATGGGACAGTGTGAATTCTGTATGTTCGAGGCTGACACTACTCTGAATTGCTGGCTTGAATGTGTAATAAGTAATTGAAGTAGTAGGAAGAGTTGAAAAAGTGAGAATGGGTTTATTTGGTATGAATATTATTGAGAagttaaataatacaaataatgttTGAAAGATATGTTTTTAGAAAAGGCTGACTCAAAGCTGGAAATCGCTTAAATGTGTAAGAAGTAGATAAAGTAGTAAAAGTTATTAACACAACATGGAGAAAGTCCTCTTCATAGGCAAGATTACAAAACCCAACCATCTGATGGAACATCACTTTGTGTTTGCTTGAGCACAGCTTGAGCTCATATAAAGGAgtcagaaaatc
>XM_039802480.1
TCTGCTGACTTGTGAATGGTTTACTGGCATCCGTGAACAACTTTGCACGGCAAATGTGGCATGATGATCCAAAGGTAGAGTGTAAGGATTGGCGTGCGGCTGGAAGTCACGACGGAAACGGAGAAGTTCACAATGATGATGCGTGCAGCCGTGGGTCTCTGGGTCCTATCAGTGGTTATCTGCGTGGGCAGAGGCCATCACCATCCCAATCATTTGGGTCACGGCAACGACAAGGCCGGCCAAGACACTGTAGTGAACGGCAGCGCCAGCAGCGTCTCCCTGGTGAACGAAGTAAACCAAGAGTTTTCCTTCCGACTCTACAGGCAGTTAGCAGCTCATGCTGACTCTCAGGGAAAGAATATCTTCTTCTCCCCGGCTAGTGTGTCGACCGCCTTGGCTGCGTTGTCCGTGGGAGCGCAGGGGGAGACTCACCGTCAGCTTTTCAGTGGTCTGGGCTTCAACAGCTCCCTCCTGACGCAGACAGATGTGGACCAGGTcttccagaccttcctccagagGGCCAACAACACATCTCAAGAGGACGGTAGCGAAGGGACCGCGGTGTTCGTGGACAACGGCTTCAAGCCCAAGCCGGAGTTCCTGCAGACCCTGAAGCAGTCGTACCTCGCAGATGGGTTCAATGTGGACTTCACCAACACCACAGAAAGTGCTGATACCATCAATAAGTACGTGGAGGAGAAGACCAACGGGAAGATTGATCAGCTGGTGGAAAACCTGGATGAAAGCACTGTCATGTATCTCATCAGCTACATCTACTACAAAGGAAAGTGGGAGACTCCATTTGACCCCAAGCTCACCAAGCAGGACGACTTCAACGTGGACGAGAACACCAAGGTTCCGGTTCTCATGATGAATCTGGAGGATAGTTTCAAAACCTATCACGACCACGATCTGAACACGACGGTCCTTCAGCTCCCCTTCAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGCAACACTGGAAAACGCCATTGGCCCGAAGCACGTCACCAAATGGTTGAAGGCTATGATGAGACCCAGGGTACTTGATGTATATATTCCAAAGTTCTCCATCAAGACTTCCTACAACCTGAAAGATGTGCTGTCAGAAATGGGAATGACAGACATGTTTGGTGATCGTGCAAATTTGAGAGGCATTTCAGAGGAGGAAAGTCTGCAAGTCTCACAAGTTGTGCACCAAGCTACGCTGGACGTGGACGAGGCCGGAGCCACCGCTGCTGCCGCCACGGGCATTGACATCGCAAGTAATTCTGTCGTCCCTGTGTTGAAGTTCAATCGTCCATTCATGGTCATCATCACTGAACGCAACACAGAGAAAATCCTCTTCTTGGGGAAGATTATCAACCCAACCATCTGATGGATCATGACTCGAGCACAGCTGTTGCATCTCATATAAAGGAGTcagaaaaaattgtgttttttgtctCTTGCTTTATTGAGAGTGTAAACAGTTTTTATATAATCTTTCAAGGTAAAATAATGTAGTGATAAAATATACTTAATActtaactactaataatactTCCCTAAGCATTTGGTATTCATTTATAActgatcagattttaaaaatacaatagagctcaacagtgaccacCCACTTTTTGAACCGCTGTAGTTCTGGGTATTAAAATCCATTATGTAAGTAAAAGTACGACTTCCACAGTGTAaaagtacaagtcctgcattgaaaatgttacttcagtaaaagtctgtaagtatcgtcaggaaaatgtacttaaagtataaaagtacttaatgcagaaaaatcctcacattttggAAACTGGAAACAGTTGATTTCATACGAACTTCTgtcttctacaggagcagaaactttgtttcacagctcaCAGTCAGTTtaccttggatggtttagacattgtggctaataatcaaaatccttgtAGAGAAAGTGAATTGGATTTTTAAACTTGATGGGACAGTGTGAATTCTGTATGTTCGAGGCTGACACTACTCTGAATTGCTGGCTTGAATGTGTAATAAGTAATTGAAGTAGTAGGAAGAGTTGAAAAAGTGAGAATGGGTTTATTTGGTATGAATATTATTGAGAagttaaataatacaaataatgttTGAAAGATATGTTTTTAGAAAAGGCTGACTCAAAGCTGGAAATCGCTTAAATGTGTAAGAAGTAGATAAAGTAGTAAAAGTTATTAACACAACATGGAGAAAGTCCTCTTCATAGGCAAGATTACAAAACCCAACCATCTGATGGAACATCACTTTGTGTTTGCTTGAGCACAGCTTGAGCTCATATAAAGGAgtcagaaaatc

Function

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802477.1 True 2383 mRNA 0.44 7 41339172 41346327
XM_039802478.1 False 2336 mRNA 0.44 7 41339172 41346304
XM_039802479.1 False 2282 mRNA 0.44 7 41339172 41345152
XM_039802480.1 False 2330 mRNA 0.44 7 41339172 41346324

Neighbor

gene id symbol gene type direction distance location
LOC120560225 NA coding downstream 35415 41299154 ~ 41303757 (-)
LOC120560210 NA coding downstream 61986 41271917 ~ 41277186 (-)
LOC120561018 NA coding downstream 538477 40799599 ~ 40800695 (-)
LOC120560039 NA coding downstream 674055 40657612 ~ 40665117 (-)
ciao1 ciao1 coding downstream 687577 40642729 ~ 40651595 (-)
LOC120560235 NA coding upstream 11969 41358296 ~ 41361770 (-)
LOC120560190 NA coding upstream 86267 41432594 ~ 41454486 (-)
LOC120560221 NA coding upstream 142302 41488629 ~ 41496229 (-)
LOC120560202 NA coding upstream 154785 41501112 ~ 41513459 (-)
LOC120561099 NA coding upstream 191198 41537525 ~ 41548904 (-)
G68989 NA non-coding downstream 51427 41134541 ~ 41287745 (-)
G69004 NA non-coding downstream 87084 41227888 ~ 41252088 (-)
G68987 NA non-coding downstream 98737 41158429 ~ 41240435 (-)
LOC120560188 NA non-coding downstream 116713 41220248 ~ 41222459 (-)
G68990 NA non-coding downstream 124176 41179561 ~ 41214996 (-)
G68911 NA non-coding upstream 137730 41484057 ~ 41552742 (-)
LOC120560251 NA non-coding upstream 171939 41518266 ~ 41520540 (-)
LOC120560253 NA non-coding upstream 174243 41520570 ~ 41522489 (-)
G69032 NA non-coding upstream 236183 41582510 ~ 41598954 (-)
G69034 NA non-coding upstream 243915 41590242 ~ 41590877 (-)
G68985 NA other downstream 261707 41076005 ~ 41077465 (-)
G68952 NA other downstream 388565 40924074 ~ 40950607 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other downstream 1008477 40313369 ~ 40330695 (-)
LOC120560061 NA other downstream 1312429 40000006 ~ 40026743 (-)
G68717 NA other downstream 1403326 39935372 ~ 39935846 (-)
G68897 NA other upstream 406209 41752536 ~ 41829133 (-)
G68907 NA other upstream 408545 41754872 ~ 41782162 (-)
G68883 NA other upstream 490220 41836547 ~ 42073980 (-)
G68923 NA other upstream 582161 41928488 ~ 41929179 (-)
rnf34a NA other upstream 752000 42098327 ~ 42107122 (-)

Expression


Co-expression Network