LOC120560222


Basic Information

Item Value
gene id LOC120560222
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42175476 ~ 42179298 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802495.1
GGCGGAGGTGTGGTAGTCTACACCTGGTTCACATTAGCTTGATTGACTCTCTGTCCTTTATAGAGGGCCGGAGGTTCAGGTCTGGTGATCTCTCAATCCTCACATCCAGAAAAGTTCACAATGATGATGCGTGCAGCCGTGGGTCTCTGGGTCCTATCAGTGGTGATCTGCGCCAACAGCGTCTCCCTGGTGAACGAAGCAAACAAAGAGTTTTCCTTCCGACTCTACAGGAAGTTGGCAGCTCATGCTGACTCTCAGGGAAAGAATATCTTCTTCTCCCCATTCAGTGTGTCAACCGCCTTGGCTGCGTTGTCCGTGGGAGCGCAGGGGCAGACTCACCGTCAGCTTTTCAGTGGTCTGGGCTTCAAAAGCTCCCTGACGCAGACAGATGTGGACCAGGCCTTCCAGACATTCCTTCAGATGGCCAACAACTCCTCTCAGGAGGACGCCAGCGAAGGGACAGCTGTGTTCGTGGACAACCGCTTCAAGCCGAAACCAAAGTTCCTGCAGACCCTGAAGCGGTCGTACTTTGCCGATGGGTTCAATGTGGACTTCAGCCAAGCCACAGAAAGTGCTGATACCATCAATAATTATGTGACTGAGAAGACCAATGGGAAGATTGACCAGCTGGTGGAAAacctggatccaaacacagtcATGTATCTCATCAGCTACATCTACTACAAAGGAAAGTGGGCAACTCCGTTTGACCCTGAACTCACCGAGCAGGACGACTTCAACGTGGACAAGAACACAAAGGTTCCAGTCTTCATGATGAATTTGGAGGatcatttctacatttattatGACGACAAGTTGAAGACTACGGTCCTTCGGCTCTCCTTCACCAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGTAACGCTGGAAAACGGCATCTGCCCGAACCACGTCACCGAATGGTTGACTACAACTATAATGAAACCCAGGagatataatgtatatattccAAAGTTCTCCATCAAGACTTCCTACAACCTCAACGATGTGCTGTCAGAAATGGGAATGACAGACATGTTTGGTGTTCGTGCAAATTTGAGAGGCATTTCAGCGAAGAAACGACTTGCTGTCTCTGATGTTGTGCACAAAGCTACGCTGGACGTGGACGAGACTGGAGCCAAAGCTGCAGCTGCCACAGGCATCGGCATCGGACTGACCGCCATCCGGTTCCCTGTCCCTGTGTTGAAGTTCAATCGTCCATTCATGGTCATCATCGCTGAAAGTAACACTGAGAAAATCCTCTTCTTGGGCAAGATTATCAACCCAAACATCTGATGGATCATCACTTTGTTTGCTTGAGCAGAGCTGTTGCATCTCCATATAAAGCAATCCGAAAAAACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802495.1 True 1373 mRNA 0.49 6 42175476 42179298

Neighbor

gene id symbol gene type direction distance location
LOC120561110 LOC104936293,LOC104940908 coding downstream 39137 42111748 ~ 42136339 (-)
LOC120560203 NA coding downstream 80958 42078586 ~ 42094518 (-)
LOC120561108 NA coding downstream 127967 42034223 ~ 42047509 (-)
LOC120561107 rictor coding downstream 153119 41938981 ~ 42022357 (-)
LOC120561104 NA coding downstream 293463 41867239 ~ 41882013 (-)
LOC120560212 NA coding upstream 29903 42209201 ~ 42212702 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding upstream 62438 42241736 ~ 42256884 (-)
LOC120560191 NA coding upstream 83127 42262425 ~ 42271211 (-)
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding upstream 479058 42658356 ~ 42662019 (-)
LOC120560237 NA coding upstream 640576 42819874 ~ 42822645 (-)
G68919 NA non-coding downstream 84947 42090073 ~ 42090529 (-)
G68925 NA non-coding downstream 85556 42044916 ~ 42089920 (-)
G68914 NA non-coding downstream 132812 42039860 ~ 42042664 (-)
G69094 NA non-coding downstream 136011 42038990 ~ 42039465 (-)
G68915 NA non-coding downstream 181985 41988436 ~ 41993491 (-)
G69110 NA non-coding upstream 30640 42209938 ~ 42223138 (-)
G69127 NA non-coding upstream 186731 42366029 ~ 42443845 (-)
G69129 NA non-coding upstream 216783 42396081 ~ 42413217 (-)
G69131 NA non-coding upstream 246454 42425752 ~ 42495934 (-)
G69144 NA non-coding upstream 336542 42515840 ~ 42516752 (-)
G69105 NA other downstream 42895 42130611 ~ 42132581 (-)
G68921 NA other downstream 59215 42107630 ~ 42116261 (-)
G69104 NA other downstream 60717 42112792 ~ 42114759 (-)
rnf34a NA other downstream 68354 42098327 ~ 42107122 (-)
G68883 NA other downstream 101496 41836547 ~ 42073980 (-)
G69140 NA other upstream 318267 42497565 ~ 42536958 (-)
LOC120561114 NA other upstream 484065 42663363 ~ 42809622 (-)
G69229 chek2 other upstream 790786 42970084 ~ 43014065 (-)
chek2 chek2,LOC102215705 other upstream 822957 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 896932 43076230 ~ 43099165 (-)

Expression


Co-expression Network