LOC120560234 (plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082)


Basic Information

Item Value
gene id LOC120560234
gene name plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42658356 ~ 42662019 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802513.1
GACACGTGAAACTGGTGGAATGTTCCTTTAAtaaaacagagtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcagtgtatttccagcccctctctctctctgaacagCTGACAGCAGAATAAGAAGGCCAGCTGATCTATTTATAGCAGAGTCCCTCCGAGTCTCGGACCTGATCTGTCTCAGTTCTGCAGCGCTGCACGCCGTCTCACCACCAACATGCCCGGCAGCCAGGCCCGGTCCCGGGCCAGGGACCGGAACAATGTCCTGAACCGGCCCGAGTTTATGTCCCTGAACCAACCCCCCCGCAGGGAGCAGGGGGCGGGGGAAGGGCGGGGGGGCAGCGGCCCGAGGAGAGCCAGCAGACAGCAGAGTCAGCAGGAGGACGCTGGAGGGAGGGGGTCGAGGGACTCCTCCGAGGGGGGCCCGGCAGCTGATGGGGGCGCCAAGGAGGCGTCTCATTGGCCGGAGCAGGACTGCATGCAGCTGAACCCGTCGTTCCGAGTCATCGCCATCAACTCGCTGCTCGCCATCGACATCAGCCTGTCCAAGCGCCTGGGGGTGTGCGCCGGGACGCGCGGCCGGGGGGCGCCGCTGCGCTCCATGGTGAGCCTGCTGGCCCTCAGCGGACACGCCCTGCCCTGGCTCTGCGGGACGCTGGTCTGTCTGTGGAGCAGCAACACGCTGGCCGGACAGGAAGTCCTCGTCAACCTGCTGCTGGCTCTGATCCTGGATCTGATGACCGTCGCTGGGGTGCAGAAGTTGGTCAAACGCCGAGGACCATGGGATTTCCCTCCAGGGTTTTTGGACTACATCGCCATGGATATGTACTCTTTCCCAGCAGCCCACGCCAGCCGAGCCGCTATGGTGTCCAAGTTCCTGCTGCACCACCTGGTGCTGGCGGTGCCCCTCAGGATACTGCTCTACCTCTGGGCGCTCCTGGCCGGCGTGTCCCGGGTGCTACTGGGTAAACATCACATCTCAGACGTCGGCTGTGGATTCGCTCTCGGCTTCCTGCACTTCAGTCTGGTGGAGTCCGTTTGGCTGGACTCCGCCACCTGCCAGACGCTCATCTCCATTGGCACGCTGCGCTGGACTCCACTGGTCTGAACTGGTTCAGCTGGGAGGAAAGCTGCATTCACACTGCGAGCGCCAAAAGCTCAGAACGGGCTAAGCTTGGTCGTGCGTCAGTTTGAGGCTTCATGTCACCAGCAGCTTCCATTGACTTGTTGCTTTGTTGCTCGTAGTCTGTGAAGGTTCTCAGTCATCCAGGTTAAAGTAGCCAAGGAAGGGTGAGAAACTAAGGGCAACTGGACTTGGTTATCATTTGGACATTCTCCCGAGAAACCCAGCTGTTTAACTTCTGTTGGGGCGTTGTCAAGATGATCGATGCCGCTGCGTTTGGTTAGTGCTCCTGGCTGTTGTGAAGACAATCGTTATGGTGGTTGGAGACACCTGAGGCGGAGGCTGAATGACCGTAGTTTGAATGTATATGTAGAAAcaaaaccacacaaacacaaacgcaGACACAGAAGGTCAAAACTTAGCGGTTTACTTctaaatgaaatatttacattttagagaggCATTTTAGAGGTTTGAAAGGGGCtactcaccgtagctcttgttgtttccggccgctaCCACCTctgcagtcaaaacgagtcgatatccaAATGTGAATGAACAGACTCCAtttgaggctcctttttcaactacaaggtcaatattgtttttaaataacgaTCAAACAAGAAataatccgtgcatttatatggaactaagctttaggagctttccatctttactctcctccctgttacgttgcattcggaaATCAATTGTTTTTGACTGACAAAATGGCTGCGACCAGAAACAACCAGAGCTACGGTGAGTAGttgaaaacctttctttttagtaaactctgggtacacaaccaatgttgtcaatgcttgcattaaggtgtagagctcctggtgatacttggagcaaagtctcatgttgtg
>XM_039802515.1
CCAGGAACTGATCCTGAACCGCTACAGAGCGCTTTTCGACAGGGCTGGATGATATGCGTTTGTTCAGATGGGATTCTTTCATGATACATGGGCGCCGGTTGGATCTGTATTGGGGTCGAGGGACTCCTCCGAGGGGGGCCCGGCAGCTGATGGGGGCGCCAAGGAGGCGTCTCATTGGCCGGAGCAGGACTGCATGCAGCTGAACCCGTCGTTCCGAGTCATCGCCATCAACTCGCTGCTCGCCATCGACATCAGCCTGTCCAAGCGCCTGGGGGTGTGCGCCGGGACGCGCGGCCGGGGGGCGCCGCTGCGCTCCATGGTGAGCCTGCTGGCCCTCAGCGGACACGCCCTGCCCTGGCTCTGCGGGACGCTGGTCTGTCTGTGGAGCAGCAACACGCTGGCCGGACAGGAAGTCCTCGTCAACCTGCTGCTGGCTCTGATCCTGGATCTGATGACCGTCGCTGGGGTGCAGAAGTTGGTCAAACGCCGAGGACCATGGGATTTCCCTCCAGGGTTTTTGGACTACATCGCCATGGATATGTACTCTTTCCCAGCAGCCCACGCCAGCCGAGCCGCTATGGTGTCCAAGTTCCTGCTGCACCACCTGGTGCTGGCGGTGCCCCTCAGGATACTGCTCTACCTCTGGGCGCTCCTGGCCGGCGTGTCCCGGGTGCTACTGGGTAAACATCACATCTCAGACGTCGGCTGTGGATTCGCTCTCGGCTTCCTGCACTTCAGTCTGGTGGAGTCCGTTTGGCTGGACTCCGCCACCTGCCAGACGCTCATCTCCATTGGCACGCTGCGCTGGACTCCACTGGTCTGAACTGGTTCAGCTGGGAGGAAAGCTGCATTCACACTGCGAGCGCCAAAAGCTCAGAACGGGCTAAGCTTGGTCGTGCGTCAGTTTGAGGCTTCATGTCACCAGCAGCTTCCATTGACTTGTTGCTTTGTTGCTCGTAGTCTGTGAAGGTTCTCAGTCATCCAGGTTAAAGTAGCCAAGGAAGGGTGAGAAACTAAGGGCAACTGGACTTGGTTATCATTTGGACATTCTCCCGAGAAACCCAGCTGTTTAACTTCTGTTGGGGCGTTGTCAAGATGATCGATGCCGCTGCGTTTGGTTAGTGCTCCTGGCTGTTGTGAAGACAATCGTTATGGTGGTTGGAGACACCTGAGGCGGAGGCTGAATGACCGTAGTTTGAATGTATATGTAGAAAcaaaaccacacaaacacaaacgcaGACACAGAAGGTCAAAACTTAGCGGTTTACTTctaaatgaaatatttacattttagagaggCATTTTAGAGGTTTGAAAGGGGCtactcaccgtagctcttgttgtttccggccgctaCCACCTctgcagtcaaaacgagtcgatatccaAATGTGAATGAACAGACTCCAtttgaggctcctttttcaactacaaggtcaatattgtttttaaataacgaTCAAACAAGAAataatccgtgcatttatatggaactaagctttaggagctttccatctttactctcctccctgttacgttgcattcggaaATCAATTGTTTTTGACTGACAAAATGGCTGCGACCAGAAACAACCAGAGCTACGGTGAGTAGttgaaaacctttctttttagtaaactctgggtacacaaccaatgttgtcaatgcttgcattaaggtgtagagctcctggtgatacttggagcaaagtctcatgttgtg

Function

symbol description
plpp7 Predicted to enable sphingosine-1-phosphate phosphatase activity. Predicted to be involved in dephosphorylation. Predicted to act upstream of or within negative regulation of myotube differentiation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in membrane and nuclear envelope.

NR:

description
PREDICTED: probable lipid phosphate phosphatase PPAPDC3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802513.1 True 2044 mRNA 0.54 4 42658356 42662019
XM_039802515.1 False 1719 mRNA 0.53 4 42658356 42661523

Neighbor

gene id symbol gene type direction distance location
LOC120560191 NA coding downstream 387145 42262425 ~ 42271211 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding downstream 401472 42241736 ~ 42256884 (-)
LOC120560212 NA coding downstream 445654 42209201 ~ 42212702 (-)
LOC120560222 NA coding downstream 479058 42175476 ~ 42179298 (-)
LOC120561110 LOC104936293,LOC104940908 coding downstream 522017 42111748 ~ 42136339 (-)
LOC120560237 NA coding upstream 157855 42819874 ~ 42822645 (-)
LOC120561115 NA coding upstream 160386 42822405 ~ 42854342 (-)
LOC120560194 NA coding upstream 211878 42873897 ~ 42958273 (-)
snapc4 NA coding upstream 443323 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 639600 43301619 ~ 43304446 (-)
G69175 NA non-coding downstream 2434 42653635 ~ 42655922 (-)
G69179 NA non-coding downstream 6950 42650291 ~ 42651406 (-)
G69177 NA non-coding downstream 9329 42648760 ~ 42649027 (-)
G69169 NA non-coding downstream 24631 42615221 ~ 42633725 (-)
G69149 NA non-coding downstream 119172 42538779 ~ 42539184 (-)
G69189 NA non-coding upstream 34154 42696173 ~ 42703992 (-)
LOC120560255 NA non-coding upstream 106384 42768403 ~ 42771433 (-)
G69184 NA non-coding upstream 118799 42780818 ~ 42819334 (-)
LOC120560258 NA non-coding upstream 308447 42970466 ~ 42971625 (-)
G69250 NA non-coding upstream 344840 43006859 ~ 43096619 (-)
G69140 NA other downstream 121398 42497565 ~ 42536958 (-)
G69105 NA other downstream 525775 42130611 ~ 42132581 (-)
G68921 NA other downstream 542095 42107630 ~ 42116261 (-)
G69104 NA other downstream 543597 42112792 ~ 42114759 (-)
rnf34a NA other downstream 551234 42098327 ~ 42107122 (-)
LOC120561114 NA other upstream 1344 42663363 ~ 42809622 (-)
G69229 chek2 other upstream 308065 42970084 ~ 43014065 (-)
chek2 chek2,LOC102215705 other upstream 340236 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 414211 43076230 ~ 43099165 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 481369 43143388 ~ 43178989 (-)

Expression


Co-expression Network