LOC120560237


Basic Information

Item Value
gene id LOC120560237
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42819874 ~ 42822645 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802518.1
CACCCCTCAGCACACCCCTCAGCTGCACACCCCTCAGCCTCAGCagcatcttcctcctcctcaacacacacaggagcagctAGCCCCTTTTGGGAAGCAGCCTCCGTTCCTGTTGCTGGACCAGCAGGAAATGGAGCAGGAGCCAGGAACAAACCTGAAAAACCTCCTCCAGGGCAGCGGACGTAGCCCTGGAATGAGGAACCTGAAATTCCCTCCTTCAATTGAAAACTACCTCCTACCTTGATGGCATCCAAAAatacacagcccacctccactctGTAGGCAAGACCATCACAACGGCACATTTCTACCTGAGGAATATACAGCAGTTCCTCAAATACTTCCGGGAAACCCTGCCTGCCCAGTCTCACCTGACTGCGATGGATGTGGTGAGCATGCTGCGCACCGTCACAAAGTGCCTCACAGACACAACCAGGAACGTTGTCCTGCACCAGCTGGCAGTGAAAAGCCACAAGAAGGCCAGGATAATATCCTGCGAGGACCTGAAGCGGTGCCAGCAGGGGGCCAAACTGAGGATCCCAGAGCTGCTGGACGCCCTGGAGGAGAACCACACGCCGTCGCTGCGGTACCGTTTTTATGGCTACTTTGCGGCCTTCACAGCCTCCATTTACGGCTATCGCCCAGCGGTACTCAGTAACCTCCGGGTTAGCGAGGTTGAGGAGGCCGCAGAGGCGCACAAGCCTGGCGACGAGGGTTTTGTGATCTCGATCAGGGAACACAAGACTAACAAGTGGTTTGGGGCGGCGCAGATCTTCTTGGAGAACGATGAGTTTCACTGGCTGGTTCGGTGGCTGCAGCTGCGGGCGGCCAGCAGGCCACCCAACCAGCTGGTCTTCTTCACGGCTGGGAGGGGCCCATGCAAGAACTTCTTGCACCACCTGCAGGTAGCGTGGGTGGAGATGGGCCTTAAAGGGTCCCCCAACTTCACCGACCTGAGGACCCGCTGTGTCTGCTCATCCCAAGAACAACCTGCCTGCCGAGCAGCGGAAGATGGTGGCCACATTTATGTGCCTCAGCACGGCCACAGCTGACCGCTTCTACGCCCTCAGCCTGAACGTGGCCCAGGAGAGGGCGTTAATGGCGAGGCTGCAAAGTAGACCAGAGAAGGCCCTCAGGATGAGCCAGTACGGCAGGCTGATGGTGGTGCTGACTGCACTCGAGGCTCAACCCCCCCCCTGTCAAAGAAGATTTCAGAGAGGGCGACAAGGGCAGCGTATCGGGGGGCACAAAAAAGACTTGCAGCCCAGCAGCCCTAGACACACAGGCATACTCACTCACTTTTTATTAGATGGTCTATTTTAGTTaagattcattttgttttattaaatgttcCATTTTAGTAGATGTTaagattcattttgttttattaaatgtttcaCTTTAGTAGATGTTAAGATTAATTTtcttttagtgtgttttcaaatgttcaaTTTTGATATGTGTTTAATACAagttcctttttatttaaaatgacaaaactaTAATACTGAGCACGCTTAGCCTAAATATGAAGCCAGGAACACCAAATTGGTCAGGTATTCTCAACACAGGCCCACCTTTGAGTTTGAAAAGGTTCAAAGTATCTGGCTTTATTAAAATACATAGATATCCAGGGCAATACTTAACATAGAGTGAATGGGAACGTCATTTCTTTTAGGAACAGACTATGGAGCTGGAACCAGGTTGTTTAGTAGAGCACTCTCGACTATACAACGTATCCAAATTTCATAGTCATAACtcatttcaacttttttttaatggggACCAGAAAACCTCACATGTTAATAacttcatttttcaaaactgaaATGAGTATGGCATTTGTCATACTTATGACAGGGAACTCAGGGTCCCCAGTGTCCCTGCTGCCATGGCAGTTTATTGTCCAAAGGTCAGTAGTAAACTAGCCCCATGATAAGATTTGTAAATGATCTTTGATCATGAAAGTTCAGTATGTGGTCACGCTGGCCTAGACTGGTCGCACACCCTGTGTGAATCTCGTTCAGATtggagataataataataataataataataataaattgaatttatatagcgcttttcatagactcaaagtcgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802518.1 True 2101 mRNA 0.49 7 42819874 42822645

Neighbor

gene id symbol gene type direction distance location
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 157855 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 548663 42262425 ~ 42271211 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding downstream 562990 42241736 ~ 42256884 (-)
LOC120560212 NA coding downstream 607172 42209201 ~ 42212702 (-)
LOC120560222 NA coding downstream 640576 42175476 ~ 42179298 (-)
LOC120560194 NA coding upstream 51252 42873897 ~ 42958273 (-)
snapc4 NA coding upstream 282697 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 478974 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 485703 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 658316 43480961 ~ 43528118 (-)
G69184 NA non-coding downstream 540 42780818 ~ 42819334 (-)
LOC120560255 NA non-coding downstream 48441 42768403 ~ 42771433 (-)
G69189 NA non-coding downstream 115882 42696173 ~ 42703992 (-)
G69175 NA non-coding downstream 163952 42653635 ~ 42655922 (-)
G69179 NA non-coding downstream 168468 42650291 ~ 42651406 (-)
LOC120560258 NA non-coding upstream 147821 42970466 ~ 42971625 (-)
G69250 NA non-coding upstream 184214 43006859 ~ 43096619 (-)
G69254 NA non-coding upstream 198487 43021132 ~ 43022838 (-)
G69258 NA non-coding upstream 214902 43037547 ~ 43038477 (-)
G69266 NA non-coding upstream 266996 43089641 ~ 43091900 (-)
LOC120561114 NA other downstream 10252 42663363 ~ 42809622 (-)
G69140 NA other downstream 282916 42497565 ~ 42536958 (-)
G69105 NA other downstream 687293 42130611 ~ 42132581 (-)
G68921 NA other downstream 703613 42107630 ~ 42116261 (-)
G69104 NA other downstream 705115 42112792 ~ 42114759 (-)
G69229 chek2 other upstream 147439 42970084 ~ 43014065 (-)
chek2 chek2,LOC102215705 other upstream 179610 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 253585 43076230 ~ 43099165 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 320743 43143388 ~ 43178989 (-)
G69249 NA other upstream 388374 43211019 ~ 43218894 (-)

Expression


Co-expression Network