snapc4


Basic Information

Item Value
gene id snapc4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43105342 ~ 43141553 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802523.1
AAATAAAGAGCGGACCCGTGCGGTTAGCATGTCCAGTATAGTAAAGGCGGTTAGTTTTGAATGCTCGTGTGTTTCTCATCTTAAACTACAAACCGGTAGTTCCGCTGGAACCCCTTCATGTGTTTATAAACTACAGAAAGAAACGTTTAAACCGGAACTCCGTGAGAAAGGTGACACCCCGCGCACCGCCTGCTGGGTAATATGTTAACGACAGAGCTACGTTGATTGGAGCTCTGCAGCGCGTGGAGGCAGAAAGTCAAAAAAGACCCAAAAAGCAGACCGGACGACAAGTTTAGATGAAGACTCGGCGGTGAAGGAGAAGCTACGGAAGCTGCTGAAGacatgtctgtctctctgtcagcagagagagacaggatcCAGCGACAGGTGGAGGAGCTGGAACGGAGTCTTTCTGCAACAAATGCTGAACTGGAGCTGCTGAGCAGTGAGACagATGATAAatcagatgatgatgatgccacggatgaggaggaggaggaggagagacagtctgcaGCAGGTCTGCTGGCTCAGAGAGAGAAGATCCAAAAAGAGATCCAGAACCTGGAGAACGCCCTGGGACCCATCTGTGTGTCAGATGATGACAGCAGCAGTGAGGAGaGTGAGCTGGGTCTACCTCCATCGGTAGACTCGTGTCTACAGATGAATCTGGTCTATCAGCAGGTCGTTAAAGAGACTCTGGACCAGCTGGAGGCTCTGCTGACTCAGAACCACAAGCACCAGAAGGAACTGCTGTCTCAGCTGTCTGGACCAATGAAAGGTTACACCAGGGAACAGTCCGCCCCCTCCTCCTGccagcagccaatcagcatgTTCTTAGGACGCTTCCTCAAACCGTACTTCAAGGACAAACTGACAGGActgggtCCTCCAGCCAATCAGGAGGCGAAGGAGAAGGCCGTCAGGATGACCGGCAGTCTGGACGACAGGAAACTGAGAGTCAGACGCTgGGAGAGCTGGCAGAAGACTCTGTTGATCCACTCAGTAACCAGTGACAGTCTGAGGAAACTCATCCAACCCAAACTCTCCAAGTTGGACTACCTGAGTCAGAAGCTGTCGTCtgctgcagagacagacaggcagcagcTCCGAGAGCAGATAGACAGGCTGGAGAGAGACATCGACCTGCTCAGagagaagacagaggcGGAGCTGATCGGGGATCAATACGATGAACACGATTGGCAGAAAATCTCTAATGTTGATGTAAGTAGagaatcaaccaatcacagagtCTTCTCTTGATTACATCAGCTGGTGTGTAAGACCAGCTGGACtaaatgtgaagtatgtCAGCTCAGGGAGCTCAGCAGGACCCACGGAGAGAGGCACTGGGACCACATCGCTGCACAGCTGGGGacgGGGAGGACAGCCTTCATGTGTCTGCAGACCTTCCAGCGGTTCGTGTCTGACTCGTTGAAGCGAGGCAGCTGGACTCCGGCCGAAGACGAGACGCTCAGAGAACTCGTGGACCAGATGAGGATCGGAAACTTCATCCCCTACACGCAGAtaagTTACTTCATGGAGGGTCGGGACCCGTCTCAGCTGATCTACAGGTGGAACCAGGTTTTGGATCCGAGCCTTAAGAAAGGATTCTGGACCAAACAGGAGGACGAGctgctgcTGAAGGCCGTGTCTCGTTACGGAGAGAAGGACTGGTGGAAGATCCGCTTCGAGGTTCCTGGACGCACTGACAGCGGCTGCAGAGACAGgtATTATGACTGTTTAAAGGCGGGGACAAAGAAAGGACCGTTTGACCAACAGGAGAAAGACCTGCTGAGACAGCTGGTGGAAAAACACGGAGTcggtcgCTGGGCGAAGATCGCTGCAGAGATTCCTGATCGTTACGATGCTCAGTGTCTGAGAGAGTGGAGGAAACTGAGCAAGcctccaccacctccacctGCTCAGAAAGATAAAAGAGCTCCAAAGAGCCGCAgagtgaagaggaggaggaaggctgGGCCGGCCAGGAGGAGAATCCGGAGACGCCTGATGAAACTGAAGGTGGAGGAGCTCAGCGTGGAGGAGAGCAGCGAGGACGAGACCTTGGTGATCGAGTACATGGACAGTgatgaagaggagaagaagaagaagcaaaagaaggaggaggaggaggttcaGATcagtgaggaggaagaggaggaggaagaagagtacATCTTACCGCCCATGCAGGAGTGGATCCCAGTGGAAGAAGCTCAAACTAACAGCTCCCTGAGCTTTCGACCGGCCGAGTTACCTTCCTCCGCCGTCGCTGACAACCCCGTACGTGTGCGCTCGACCATCGTGGGCCAATACGGTCGCTCGGTAATCATCGGGCCGCGTCCCAGACAGCTGCAGTGGGAGGGTCACCACGGCAACAACGCCACGACGATGATGATGGTGACTCGGAGCCAGCTCCAAACGCACCTGCAGCGCCAGGCGCAAACCTCCTCCGACAGCAGCCAGCACCCCGGCCCCCGAGGGAAGGTCCAGATCGACAAAAACAACCCGCTGGGTCGAGTGATGGACAGACGTCTGGGATGCAGGCTGCAGGCTGCCGTCACACCGTGGATCGGTTACCTGCTGATCCACGCCGAGGgcgagaagaagaagaagagacgcAAAGCGACGGCGGCAGACGTCCTGAGGCAGCGAGCGGAGAAGAGGGAGGAGCGTCTCTCCACTCCGTTCTTCCTGCTCCTTCTGCAGAGCCAGAACGTGGACGCCTTGGGCTGCAAGGAGATGATCGAGCAGCGCAGGAAGAAGGTGGCGTCCACAGTGGCGAGGCCACGCCCGCGGCCACCGGTGGCGTCCACCGGCGGGACGAAGAGTGTTGCAGAAATACTGTATCAGAAAACCAtgaaggaggagcagcaggatcTGGACCTGCAGCACCAGCTGATCCTGAGTCAGCTGCAgaccctgcagcagcagcagcagcagcagagagccaaACAGAACCATCTGCTGCTCCAACAGCGTGCACGACAGCAGCGACCTGCGCTCCCCTCTCAGAATCAGCCCGGCTTTCTTCTTCAGATGCCTCCTCAGATGAATCCTAGGATGTTGTTTCGTCAACCTGTCTTCATTCCTGTCACGCGACCTTGCGCTCCCCCCATCCAGTTCATGTCTCCCTCTGCCCTGAACAGACCTTCACCTGTGACGGTCGTCACATCTCCGTATCCTGCCCGTCCTGCGTCTCACCCACTGGGTGTCCCTTCTTCTGTCACTGTGGTCCCAATGCGCCTGAATGCCACATCCACTTCCCCTGTCTCTTTTCGCCAACAAGCTGTACCTTTGACTCAAAACCCTGTCCCTGCTTCGGCCCCTTACCTTGCTCAGCAGCATGTTTCTGTTGCTTCTACGCTGCCCGGTCAGCACGTTGCTCCCTCCGAATCCACTGCCTCCGTCGCCTGCCCCAGTCCGTCTAGCTCCATCTCTAGTTCATCCAAACGGGGGAGGAAAAAGGTGGCAGAGGATCAAGTGGCTGGTAGCAGCAGTCAGAGTGGGGAGGATATGAGCGGGGCAAGCGATTGTGTGGACGGGGCAAAGGACAGTGCGATTAAAGATGGAAGGAGGATTCGGAAGCCGAGCCAGAAGGCCAAAGCTCTGCAAGAAGCCATCGTAGCCAGGGCTGAAGCCATCAAGAAAGCTGCTTCATCTCCGCGAAAGAAAGCTCAGCTCCAGAACACAAACTCTCCTCCGACAGACATTCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCATCCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCATCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCCAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCAAACTGTTCCCTCCCAAACAGTCCAAACTGTCCTTCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCCCCCAAATGTCCTTCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTCCCTGTTCCCTCCCAAACAGTCCTTCCTGTTCCCTCCCAAACAGCCCTCCCTGTTCCTTCAAAAACAGTAGTCCCTGTGAACTTGTCCCGGTTGCCCCTGAATGCCACAGCAGCCTGCTCTGATAGGAGTGTGTCCTCAACTCATAACCTCAGTTTAGCACCGCCTGCTTCCTCCACAATAAGCCTACTTCCTTCTTTCCCTAAAGAGCATGACTACACCTTTATAAATCCTGGCCCTACCCCGAGTCAACGTAGCTCAAAGTCCATTCAACCGAGCCCTGACTCCGGCTCCAACGAGCCTCCCCAGAGGGTGGAGGAGCAGCCGTGCGTTTCAAGCAGTCAAGACGACCAATGTGAGAGCGAGACAGGTGCAGGTGGGAGCCAGAAAGGAAAGAGAACCCGGAAACCGACTCAGAGGGTCAAAGATCTTCAGGAAGCCACTCAGGCGAAGGTTGAAGCCAAGAAGAAGAAAGCTTTGAAGCCTCCTCGGGAGAAGCGCCCTCCTAAGTCTCGCGCTAAAAAGAAAGTTATGGTGAAGAACGAGCCGGCGATTCAACCCCGCGGCTTCCATTTACTTCCCAATCAGTCGATGTGGGTCATGACTCCCGGGGGTCTGGTCCAGCTGACAGAAGGCCCTCAGCCAGGCCTGCAGCTGGCGTTGCTACCAAACGCTCGCCTCCAAGCTCCACACGGGAATGTTTTGAACCATCCGGTCACGCCCGCTCTGCGATTCACCGCCGGCAGCCCGCAGTTTACCGCACCCCAACCCACCACTGCTGTATCTGTCCCCTTAAACCGCCCCTTTATGAATCAGCCACACCTTCCTGCTGGGCCCACCTCTGCATTCAGGCCCAACCCACCAGCCTTCATCCTGCAACCAGTCTCAAACCCCCGtctccccctgcctccccctAAACTCTTCCTGCCGTATAAAGGCGCAGTTACAGCGGACCCGAGAGCGCCCCCTCCCCTCAGGCGGGAGGCGCTGCAGTTCGACCCCTCCCTGATGTTCCTTGAGCCCAAGGACGCGGTGCAGGATTGGCTGAGCGGTCAGGGAGGCGTGGTGGTACCTGGATTGAGCGTGGCTCTTCCCTACCTGCCGCCCTTCGTCAGCAGTCTGAGCACGCTCAGTGCGCTGCTTCGGGCCAAGAAGTCTCTGACCAAATCATTCCTGAAGCTGCTGAGTCAGCGCTCCCAACCCCGACGCCCCAACAGACCCGGCAGCTGCACCCAGAGGACATCCAGACCGTCTCCAGACCTGCCGGACTCCACCTCTGACCTCCAACCAGCCGAGGACTCTCCAGCGACAGCGTCCATTAGCTCCGCCCCCCCgcaggaaggggaggaggcagcGGCGTCCGTTAGCTCCGCCCCCCCGCAGGAGGACATGGACCCGGCGGAGGTCGTGGCGGTGGCGCGGCTGCTGGTGGCGGAGCGGTTCTCCAGTAACCCCGCCTACCAGCTGCTGAAGGCCCGCTTCCTGTCCTGCTTCACCGTCCCCGCCCTCCTGGCCGCCATGCAGCCAATCGGAGAGAAGACTGCCGGCGaggacgaggaagaggaggacgaggTGGACGTGAAGACGctcaaagagagaggaagacgcCGGAGAGCAGAGAGATCTTTGCTGCTGTGTGACGGGTCCGGAGCCTCAGCCAATCACTTCTCAGGAATCAACAACCGCACACCGGACCAGACGGTCTCCGTCCAATGAGAGCGCAGATCTCATCCTCGTTAAACCTGTTGGAGGAGTTCAAACAAGACTGTTGGTCTTAAAGAAATGGTTCACTTCTGTTTTGGTCTCAGAGCTCAAATCTGAGAGTAAGGCTGCATCTCCACTGCtccgttcccccctctcattccccctgctctggtgtttccccctctcattccccctgctctggtgtttccccctctcattccccctgctctggtgt

Function

NR:

description
PREDICTED: snRNA-activating protein complex subunit 4-like

GO: NA

KEGG:

id description
K09453 SNAPC4; snRNA-activating protein complex subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802523.1 True 6535 mRNA 0.57 26 43105342 43141553

Neighbor

gene id symbol gene type direction distance location
LOC120560194 NA coding downstream 147069 42873897 ~ 42958273 (-)
LOC120561115 NA coding downstream 251000 42822405 ~ 42854342 (-)
LOC120560237 NA coding downstream 282697 42819874 ~ 42822645 (-)
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 443323 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 834131 42262425 ~ 42271211 (-)
LOC120561120 NA coding upstream 160066 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 166795 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 339408 43480961 ~ 43528118 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 416164 43557717 ~ 43582312 (-)
LOC120560219 NA coding upstream 448491 43590044 ~ 43651535 (-)
G69246 NA non-coding downstream 590 43103960 ~ 43104752 (-)
G69250 NA non-coding downstream 8723 43006859 ~ 43096619 (-)
G69266 NA non-coding downstream 13442 43089641 ~ 43091900 (-)
G69258 NA non-coding downstream 66865 43037547 ~ 43038477 (-)
G69254 NA non-coding downstream 82504 43021132 ~ 43022838 (-)
G69271 NA non-coding upstream 10309 43151862 ~ 43153110 (-)
G69251 NA non-coding upstream 24568 43166121 ~ 43194392 (-)
G69272 NA non-coding upstream 62108 43203661 ~ 43225724 (-)
G69273 NA non-coding upstream 84382 43225935 ~ 43226903 (-)
G69340 NA non-coding upstream 125264 43266817 ~ 43450492 (-)
card9 card9,LOC108245830 other downstream 6177 43076230 ~ 43099165 (-)
chek2 chek2,LOC102215705 other downstream 80292 43002255 ~ 43025050 (-)
G69229 chek2 other downstream 91277 42970084 ~ 43014065 (-)
LOC120561114 NA other downstream 295720 42663363 ~ 42809622 (-)
G69140 NA other downstream 568384 42497565 ~ 42536958 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 1835 43143388 ~ 43178989 (-)
G69249 NA other upstream 69466 43211019 ~ 43218894 (-)
LOC120561119 LOC102192266,LOC107386210,LOC101154874,LOC101486486 other upstream 81924 43223477 ~ 43251312 (-)
G69356 LOC106941104,LOC103460379 other upstream 230214 43371767 ~ 43380599 (-)
phf19 phf19 other upstream 389680 43531233 ~ 43551988 (-)

Expression


Co-expression Network