LOC120561099


Basic Information

Item Value
gene id LOC120561099
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41537525 ~ 41548904 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804054.1
ATGGCAGATTGGATGAAGAGTTGGAGGCTCCTGATCCTCTTCAGCCTCTTCAGTCTCAATGAACTATTTGAGGTGAGAGATGAAGAGTGGAAGGAGCTCAGCCCGGATATCGCTGCATTACACCAGCTCAGAGGACTGTCTGAACACATGTTTCATGAAAATATCAGGAACCCATCGAGCCACAGGGTTACGACCGTGCATTGGGCCAGTGATGTGTTGAAATCTGTTGGCTGGGACACAACCGTGCATGGGGCCAGAGATGTGTTGAAATCTGTTAGCTGGGAGGACATTGACCGAAACCCGATGACTTTGCTCTCTGATCTTCAGGAGAATGAGAATTTCACAGCTTTTTTCATTCAGAAGGAACAGGATTTTGAAGACTTCTTGGCAGCTGTTGATGAACAGAAGACACAAGATGTGCTCCTGAGTGCTTCGGAGATCTCGCACAGCTACGGCCAAAAACTTCTGGTCATGACCGACAACGAAAAGTCAACAAATGACAGAGTCCAACAGGAATACAGCATGGATTCTCATTACTCAGTAATAGTCAGCAATGAATGCCTATTCAATGTCTCGTGTGTACCAGAAGCAGACAGCTACACCTTGGTGAAAATATTTGGGAGTGTTTCAGAAGATGGACAAACTGTGTCTGGCCTTTCTGGCTCTTCACTCGCAGAGCTGATGTTGAAACCATCACTGGAAACTGCGCCCGTGTTCTCTCTCGATGGAAACACAACCAAAGACTTCCAACATAACTTCATTAGAGTTTTTACGGCCCGTGGCATCCCAGCAGTCCTAGAAACAAACCAGGAGAATCACCAGACTTACCAGGTCATGAACCAACTTAGAGAAGTTTCTGGATACCAAATTCCACAAAGACCGGTTGATCACAGCACCCAGTACGACCACCAGCAGATCCTCATCCTGGAAGATGACCCTGTTGTCAGAACAGCTGCTACGTATCTTTTTGAGAAGCATCCAACGGTTTCCTCTGTCTACGTTCTTGATGACAACCAAAGACCAGTACTGATCCGAGGTGACTCCGTGCCTCTGACAAAGGACAGCCGGCTGGTGCTGGTCGGCCACGGCAGGAAAGACAACTCAGGAGAAATGAGACTGGGAGGATATGAAGTGCAAGAAGTCTCCAAAATCATTAAACAAACCTCCAGGGATTccaataaaattaaaacaataactGTGGTGGCCTGTGACGTCGGATCAGATAAAGCATTCATTGAAACGCTGCTGAAGGATCTCCATGAGACCGCCGGCATGGAGACAGAGCTGCACCTCAGGAACACTGTGCTCCAGATCttacacacaggagagaaaatcACCCTGGAGATCACTAAGGATGGAGAGCAATGGAGACATGAAGATGACAGCAAGAAAGTGGTCGCAACCCTCGATAGGAACGGAGATGTAATAATTAGAAATGAGCCCGGCAGTAAAGGAAAGGAAATCGTTACCGCTGAAAGAAACTTTCTAGGTCCAAAAAAAAATGATCCGGTCAAACAGTCAGGCAAAGGTCAAAgtacagcagaaaaaaaaaccagCCAAGACCATATAGCCTACAGAAAACACTGGCCTATTGCACCAAAGAGATTTATTAACCAGAATGTTTATGATAACTTCAATCCTAATGATAAGAAAGCTTGTGATGAACTTGAAGCTATGTCCTGGGGATTCTTTCACAACGAAAACATACCCAGTCCAGTCAAACTTGACTTTGAAGCACACATAGCAGAGTATTATTTAACTAAAGAGGtaaaagagggagaaaagatAAAGGCAGTGCAGATAAAGgatcaaaatgaaaaacaagttATTCTTTCCAAGTGTTATCAGGTTCAATCAGGAGAAGATGTCAGGAATGTAATCCGTCACTATGCAAAGACCGGAGAAGATGAGGTTACATATCTGAAGGTCAATGACTGGATATTAAAGATTAATCCTGATAATCTGTATGTTTCTCTAGTTGGAAAAAGGCTTGACAACACTAGAGGAGAAACTGAAGAAAAGGTTAAGCCATGTATTGAAGCTCAGACAGGAAAAGAAAGTTACAAAGACATACGGGGAGGAATTAAAAAGGAATTGGGCAATAgtgacccaaaaaaaaaatttgctcaATATGCGGAAGATTTTCTTTATGTAGACGAAGAATATTCTCGGTACACAAATTACCTGCCGCTCCCCACTGAGGCCTGGCTAACCACATATTTTACTGCATCAGTTATATCTGAATCTGCTAGAAACTTTCGGACATTTCCTCTGATTCTCATGGCCCTGGATATGGTCCAAAGAGATGACATTATAAAAGAGAAAGGACTGAACTTTCTTTGGGAAGAACATTCAATGGCAGGAGGAGGTTCTTGGATTGACACAAGCAAGCGGGGATTTAGTGGCTCAGCCGACTATGAGAACTCTATTAATTTAGTTACCCAGAAGCCTTCGGCTAGTTCCGAAGTCAATAATAAGCCTAAAGATAAAAAGAAACAGCTTGAAGAGCTcctaaaaatagaaataaaactgTACCAATCGTACAGTGAATTTATGCCTCAAAGAGaagaaaatataaatgtattcaaTATCGCAGAAAAATACGAATGATTCAACATAATTCTGTTGTTGATTACGAAACGTTCAAAAATAAGGTAAACAACAATCCTCAAGCGTCCGGCTCACGTCCAAAAACTTAACATCTGGgtagcactttataataactacaCACAATTCATCAGTTATTAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804054.1 True 2751 mRNA 0.43 6 41537525 41548904

Neighbor

gene id symbol gene type direction distance location
LOC120560202 NA coding downstream 24066 41501112 ~ 41513459 (-)
LOC120560221 NA coding downstream 41296 41488629 ~ 41496229 (-)
LOC120560190 NA coding downstream 83039 41432594 ~ 41454486 (-)
LOC120560235 NA coding downstream 175755 41358296 ~ 41361770 (-)
LOC120560207 NA coding downstream 191198 41339172 ~ 41346327 (-)
LOC120560239 LOC104917865,LOC103367618,LOC107092737,LOC102234380 coding upstream 23240 41572144 ~ 41582352 (-)
bag4 NA coding upstream 40017 41588921 ~ 41596910 (-)
pold2 pold2 coding upstream 247357 41796261 ~ 41815906 (-)
LOC120561103 NA coding upstream 288722 41837626 ~ 41858498 (-)
LOC120561104 NA coding upstream 318335 41867239 ~ 41882013 (-)
LOC120560253 NA non-coding downstream 15036 41520570 ~ 41522489 (-)
LOC120560251 NA non-coding downstream 16985 41518266 ~ 41520540 (-)
G68989 NA non-coding downstream 249780 41134541 ~ 41287745 (-)
G69004 NA non-coding downstream 285437 41227888 ~ 41252088 (-)
G68987 NA non-coding downstream 297090 41158429 ~ 41240435 (-)
G69032 NA non-coding upstream 33606 41582510 ~ 41598954 (-)
G69034 NA non-coding upstream 41338 41590242 ~ 41590877 (-)
LOC120560256 NA non-coding upstream 78615 41627519 ~ 41628878 (-)
G68882 NA non-coding upstream 111864 41660768 ~ 41701471 (-)
G69058 NA non-coding upstream 184465 41733369 ~ 41733800 (-)
LOC120560231 NA other downstream 135624 41319196 ~ 41401901 (-)
G68985 NA other downstream 460060 41076005 ~ 41077465 (-)
G68952 NA other downstream 586918 40924074 ~ 40950607 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other downstream 1206830 40313369 ~ 40330695 (-)
LOC120560061 NA other downstream 1510782 40000006 ~ 40026743 (-)
G68897 NA other upstream 203632 41752536 ~ 41829133 (-)
G68907 NA other upstream 205968 41754872 ~ 41782162 (-)
G68883 NA other upstream 287643 41836547 ~ 42073980 (-)
G68923 NA other upstream 379584 41928488 ~ 41929179 (-)
rnf34a NA other upstream 549423 42098327 ~ 42107122 (-)

Expression


Co-expression Network