LOC120561103


Basic Information

Item Value
gene id LOC120561103
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41837626 ~ 41858498 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804056.1
ACAAAGCCAAAGTGCAGTTTCTCTGATATATCTTATAAAAAGGAAAATCTATCTTTGTCCAGTCAGTGCTTCTCTGTCTGCGCTTTAACCAGGAGAAGGGCAATGGCAGATTGGAAGAAGAATTGGAGGCTCCTGATCCTCTTCAGCCTCCTCAGCCTCACTGAACTATTCGAGGTGAGAGATGAAGAGTGGAAGGAGCTCAGCCCGGATATCGCTGCACTACACCAGCTCAGAGGACTGTCTGAACACATGTTTCATGAAAATATCAGGAACCCACCGAACCACAGGTCTCTTGTTATGGATTTGTTCCTTGTTCCTCTCCATAGGGACACAACCGTGCTTGGGACCAGAGATGTGTTGAAATCTGTTAGCAGGGAGGACATTGACCAAAACCCGATGACTTTGCTGGCTGATCTTCAGGAGAATGACAATTTCACATCTTTTGTCATTCAGAAGGAACAGGATTTTGAAGGCTTCTTGGCAGCAATTGATAAACAGAAGACACAAAATTTGCTGCTGAGTGCTTCGGAGATCTCGCACAGCTACAGCCAAAAACTTCTGGTCATGACCGACAAAGAAAAGTCATCAAATGACAGAGTCCAACAGGAATACAGCATGGATCCTCATTACTCAGTTATAGTCAGCAATGAATGCCTGTTAAATGTCTCGTGTGTACCAGAAGCAGACAGCTACACCCTGGTGAGAATATTTGGGAGTGTTTCAGAAGATGGCCAAACTGTGTCTGGCCTTTCTGGCTCTTCACTCGCAGAGCTGATGTTGAAACCATCACTGGAAACTGCGCCTGTGTTCTCTCTCGATGGAAACACAACCAAAGACTTCCAACATAACTTAATTCGAGTTTTTACGGCCCGTGGCATCAGAGCAGTCCTAGAAACAACCCAGGAGAATCACCAGACTTACCAGGTCATGAACCAACTTAGAGAAGTTTCTGGATACCAAATTCCACAAAGACCAGTTGATCACAGCACCCAGTACGACCACCAGCAGATCCTCATCCTGGAAGATGACCCTGTTGTCAGAAAAGCTGCTACGTATCTGTTTGAGAAGCATCCAACGGTTTCCTCTGTCTACGTTCTTGATAACAACCAAAGACCAGTACTGATCCGAGGTGACTCCATGCCTCTGACAGAGGACAGCCGGCTGGTGCTGGTCGGCCACGGCAGGAAAGACAACTCGGGAGAAATGAGACTGGGAGGATACGAAGTGCAAGATGTCTCCAAAATCATTCAACAAACCTCCAGGGATTccaataaaattaaaacaataagtGTGGTGGCCTGTGACGTTGGATCAGATAATGCATTCATTGAAACGCTGCTGAAGGATCTCCATGAGACCGCCGGCATCAAGACAGAGCTGCACATCAGAGACGCTGTGCTCCAGGTCagccacacaggagagaaaatcACCCTGGAGATCACTAAGGATGGAGAGCAATGGAGAAATAAAGATGACAGCAAGAAAGTGGTCGCAACACTCGACAGGAACGGAGATGAGGACGAGGCTTTTAGCAGCGTGACGGAGGTTCGCGGGTCAAAGTTCAACGATGACATCAGAGGGAACAAAGAACACAACGTTATTGTcccaggaggaggagatgattTCATCCAgggtagaggaggagaggactGGTACGTTATCACGCCGGGCCAAGGAGTAAAAACCATCAACAATCAATCTCCAGATCTAGCCTTGGATATTCTCTTTCTGAAACATAACATGTACATAAAGTGTTCTTGTGAAGGGCAGAGCATCATCATTTTGGTAGACGGTAGAAAAGATGTTATTTTACAGAACTGGTTTGATTCAAAGTTTCATCAGCATCTGCAGATTAAAACCAGTGATGGAATAACAGCTGGACTGATGACCAACCGCAGCAGCTGTGATGAGGATGATTTGATGTTCCCCATAACTGTTGATTATAGAAATCAGAAACCTGAACCACTTCTTCTGCCCATAACACAGGAAACTAAATACAAGTCTTTCAGAGATGGAAGATGCTTATTCTGCCTTCAAGGCAAAGTGATAGTGATGAGTTATCAGTATTCAGTAAAAGAAATGTACGGTTCCTCAGGTTTCGACGTCATGGTTGGAAACAGCAATGATAATCTGCTTGATCCATACACTGGAGGTGCCTTAATGTTTGGAGGTGAAGGAAAAGACATTTACGTAATCAAACAAGGATATGGAAACCACTTAATTATCGATAACTTTGCAGAAGATCAGAGTATTGATACTGTGTTGGTTGACATGGATTATCTTCATGGCAGTCAAGTCTCACTGTACTCATCAAAAGAAGATTTGGAAGTGACGATCACATCAAAAGGGGAACAATTCAAATTCACTCTGCTCAACTACACCACTAGTTCCAAATATCAGCACTTAGAATTTCAGAGTTCTGACGGAgtgaattttaaattaaaatcacTAAACTCAACCAGAAATGTCCCTTTCTTTCAAATTGAAGCATTCAAAGTGACTCTGAAACAGCTGCAGGTTGACTGCCGCTTGGATCTCAACTCTCAGAGGAATCTGTCAAAGGTCCACACGGTGCAAGGCTGTCCCTCCCAGTCCAATGACATACTAGGTAACGATCAAGacaacgctctgattggtgggTGGAAGGATGACGCCTTGGAAGGAGGCGCCGGAGATGACACGCTGATCGGAGGGAACGGAGACGACCTCCTGATTGGTGGcttgggagatgacactctttATGGCGAGGACGGAAATGACACCATGATGGGAGACTCTGGCCAGGACGTCTTCCTTCCTGGACCAGGGGCCGATCTGGTGGATGGGGGTCCTGGCAGAGACACGGTTGTGTACCGGGGCGATCCTGACACAGGTAAAGGAGTTTATGTCAACCTGCTGACGGGACAAGGCCGCTACGCCGATGCTGAGGGCGACGTGTTGAAGGATGTGGAGATAGTCATCGGCACCGTCTACTCTGATATCTTAGTGTCCGGTTACGAAAGTTCTCTTCTCAAAGGCTCGGACGGTAATGACATCTTGGTGTCGACCGGTGGTGATTACCTGGTTGGTGGTGATGGAAATGACATTTACATGTTGGCTTTCAACAACGGTTCAGTCACGGTTGATAACTGTGCCAAAGACAACGCTACAGACGTCTTGTACATGAGCTCACAGTCAACGCCGCCATTTGACTGCCAACTTTTGTCTGATAGAGTTCTCCTGACTTTCTTTGGACTTAACCAAACTACAGTTAAAATTACACTGCAGGGCTGGATCAGTGATGAGAACGAATGTGGTCATTTGAAGTTGGTTTTTAGAGATCTGGAGGTGTCGGTGGACCAGCTGCTGCAAGAGTGTCAGTTAAGACAGCTGGAAAAATGTCCTCTTTGCTGGGTTTTCCTTTGTgcaaacaagaaaaaacaacaacaagagaTATGGGAACAACTAGAAACAAATGTTCATTCAATTGCTAGCTGGCTGATATAG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804056.1 True 3486 mRNA 0.46 8 41837626 41858498

Neighbor

gene id symbol gene type direction distance location
pold2 pold2 coding downstream 21720 41796261 ~ 41815906 (-)
bag4 NA coding downstream 240716 41588921 ~ 41596910 (-)
LOC120560239 LOC104917865,LOC103367618,LOC107092737,LOC102234380 coding downstream 255274 41572144 ~ 41582352 (-)
LOC120561099 NA coding downstream 288722 41537525 ~ 41548904 (-)
LOC120560202 NA coding downstream 324167 41501112 ~ 41513459 (-)
LOC120561104 NA coding upstream 8741 41867239 ~ 41882013 (-)
LOC120561107 rictor coding upstream 80483 41938981 ~ 42022357 (-)
LOC120561108 NA coding upstream 175725 42034223 ~ 42047509 (-)
LOC120560203 NA coding upstream 220088 42078586 ~ 42094518 (-)
LOC120561110 LOC104936293,LOC104940908 coding upstream 253250 42111748 ~ 42136339 (-)
G68917 NA non-coding downstream 64899 41767003 ~ 41772727 (-)
G69062 NA non-coding downstream 93138 41743438 ~ 41744488 (-)
G69058 NA non-coding downstream 103826 41733369 ~ 41733800 (-)
G68882 NA non-coding downstream 136155 41660768 ~ 41701471 (-)
LOC120560256 NA non-coding downstream 208748 41627519 ~ 41628878 (-)
G68918 NA non-coding upstream 5278 41863776 ~ 41864424 (-)
G69078 NA non-coding upstream 44403 41902901 ~ 41903622 (-)
G68927 NA non-coding upstream 69236 41927734 ~ 41928031 (-)
G68924 NA non-coding upstream 70737 41929235 ~ 41988063 (-)
G68902 NA non-coding upstream 77008 41935506 ~ 41936244 (-)
G68897 NA other downstream 8493 41752536 ~ 41829133 (-)
G68907 NA other downstream 55464 41754872 ~ 41782162 (-)
LOC120560231 NA other downstream 435725 41319196 ~ 41401901 (-)
G68985 NA other downstream 760161 41076005 ~ 41077465 (-)
G68952 NA other downstream 887019 40924074 ~ 40950607 (-)
G68923 NA other upstream 69990 41928488 ~ 41929179 (-)
rnf34a NA other upstream 239829 42098327 ~ 42107122 (-)
G68921 NA other upstream 249132 42107630 ~ 42116261 (-)
G69104 NA other upstream 254294 42112792 ~ 42114759 (-)
G69105 NA other upstream 272113 42130611 ~ 42132581 (-)

Expression


Co-expression Network