LOC120561104


Basic Information

Item Value
gene id LOC120561104
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41867239 ~ 41882013 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804057.1
CAAAGTGCAGTTTCTCTGATTTATCTTATAAAAAGGAACATCTCTCTTTGTCCAGTCAGTGCTTCTCTGTCTGCGCTTCAACCAGGAGAAGAACGATGGCAGATTGGAAGAAGAGTTGGAGGCTCCTGATCATCTTCAGCCTCCTCAGCCTCACTGAACTATTCGAGGTGAGAGATGAAGAGTGGAAGGAGCTCAGCCCGGATATCGCTGCACTACACCAGCTCAGAggactgtctgatcacatgtttCATGAAAATATCAGGAACCCACCGAACCACAGGGACACAACCGTGCATGTGGCCAGAGATGAGTTGAAATCTGTTAGCAGGGAGGACATTGACCGAAACCCGATGACTTTGCTCGCTGATCTTGAGGATGAGAATTTCACAGCTTCTGTCATTCAGAAGGAACAGGATTTTGAAGGCTTCTTGGCAGCGATTGATAAACAGAAGACACAAGATGTTCTCCTGAGTGCTTCGGAGATCTCGCACAGCTACAGCCCAAAACTTCTGGTTATGACTGACAAAGAAAAGTCAACAAATGACAGAGTCCAACAGGAATACAGCATGGATCCTCGTTACTCAGTAATAGTCAGCAATGAATGCCTGTTCAATGTCTCGTGTGTACCAGAAGCAGACAGCTACACCTTGGTGAAAATATTTGGGAGTGTTTCAGAAGATGGACAAACTGTGTCTGGCCTTTCTGGCTCTTCACTCGCAGAGCTGATGTTGAAACCGTCACTGGAAACTGCGCCCGTGTTCTCTCTCGATGGAAACACAACCAAAGACTTCCAACATAACTTCATTCGAGTTTTTACGGCCCGTGGCATCACAGCAGTCCTAGAAACAAACCAGGAGAATCATCAGACTTACCAGGTCATGAACCAACTTGGAGAAGTTTCCAGATACCAAATTCCACAAAGACCGGTTGATCACAGCATCCAGTACGGCCACCAGCAGATCCTCATCCTGGAAGATGACCCTGTTGTCAGAACAGCTGCTACGTATCTTTTTGAGAAGCATCCAACGGTTTCCTCTGTCTACGTTCTTGATAACAACCAAAGACCAGTACTGATCCGAGGTGACTCCGTGCTTCTGACAGAGGAGAGCCGGCTGGTGCTGGTCGGCCACGGCAGGAAAGACAACTCGGGAGAAATGAGACTGGGAGGATATGAAGTGCAAGATGTCTCCAAAATCATTCAACAAACCTCCAGGCGTTccaataaaattaaaacaataagtGTGGTGGCCTGTGACGTCGGATCAGATAAAGCATTCATTGAAACACTGCTGAAGGATCTCCATGAGACCGCCGGCATCAAGACAGAGCTGCACATCAGGGACGCTGTGATCCAGGTCagccacacaggagagaaaatcACCCAAAAGGATGGAGAGCAATGGCGACATGAAGATGACAGCAAGAAAGTGGTCGCAACCCTCGATAGGAACGGAGATGTAATTATTAGAAATGAACCCGGCAGTAAAGGAAAGGAAATCTTTACCGCTGAAAGAAACTTTCtaggtaaaacaaaaaaacgtttcctgGTCTACAGAGACAGCTGGCCAGATGAGCCAAAAAGATTTATTAACCAGAATGTTTATGATAACTTGAATGCTAATGAACGTAATGCTTGTAATCAACTTGAAGCTCTATCCTGGGGATTGTTTCATGACGAAAACATACCCCGTCCAGAAAAAATGAAGATTAAAAACTTGGATCTAAAAGAGTATTATttatcccccaaaaaaaaagtaaaaaatgaacaaacagGATGGTATGAGCTTACAGGGGAGGTAGAGAcgataaataataaacaaaaagtaaaagataTTCTTTCCAACTGTTATGAGATTAAATCAGGAGAAGATATCAGGAATGTAATCCGTCACTATGCAAAGGACGGAGAAGATGAGGTTACATACCTGAAGGTCAATGACTGGATATTAGAGGTTAATCCTATAAGTCTGTATGTTTATCTAATCGGAAAAAAGCTTGACAACAATGAAAGAGGAAATGAACAAAAAGTTAAGAAATGTATTGAAGATCAGATAGGAAAAGAAAGATACTCTGACATACGAAAAGGAATTAAAGCAGAAATGGGCCAAAATGACCCTAAAGAAGGATACGCTCAATATGTGGAAGGTATTTTTCGTGGAGAGCCCACAACACCTCGCCTGCCGCTCCCAGCTGAGGCCTGGTGCACCACATATTTCACTGCATCAGTTATATCTGAATCTGCTAGAAACTTCCGGACATTTCCTCTGATTCTCATGGCCCTGGATATGGTCCAAAGCACAGACAACAATATCAAAGCGAATGGACTGAACTTTCTTTGGGAAGAACATTCAATGGCAAGAGGACGTTCTTGGATTGACCCAAGCAGGCGTGAATTTAGTGGCTCAGCCGACTATGAACGTTCCAGCAAATTACAAAACCCAAATCCTTCGACTAGTGAGGAATTAAGGAATGATCTTAAAAAGCTTATAACAAGTGAAATCCAACTGTATGATAAGTGGATTGGAAAAAAAGATCCATCTCAGATATTCAATATCGCTAAGAAATACGAGATAACTGAACCAAATGCAGTTCAGGATTACGAAACGTTCATAAATACAGTAGGTGAGAGCGACTCTACAGCATCCGGAGCATTAGGAGGCTACAACGACGGCCACGTAACATCCCAAGACTTGAAATCTGCCTCTGAGTTGGAAAAGTCCTTCAAACTTGAATCGTATTACTCCAGGCGGAGCGTTTTAACCGCTGAACAAGTCTACAGtcagttaaaggcaaaatatggtGAAAGTCTGGCAGGGTTGCAGGTCCAGGAGGGCAGCGCCAGAATGGAGAACGGAGAGTTTGTGTGTAATCTGTTAAACGGTACTGACGCTAAATCTGTTGAGTTTAGAGCTGAATTATCTCCGGAGAGTCAACACTACTCTAAAGCAATGTCAGAGAGCATTGAAACAGCAGTTCATGACATGGAAAATCATGGTTCCTCCCATCAAGGCAGCAAGTACGTAGAGCACGCTGGGCATGCTGTTGGGACGCTGGGACTCATGCTGGGGATGAAAGGAGCTGTTCGTGCTTTTGAACAGGGTGACTTTAAAGATGGCGTGGTGGGGTCTCTGCAGACGGCTCATGGAGTGACAGCTATGACATCGTCTATTATTGCAAAACAAGCTCTGTCCTCAGAGGCCAGAATGGCCAAAGCTGTAACATCGGTCATGAAAAGACCTGCAAAGAAGGGTTTTACGTCAGTTATACCAATAGTGGGAATTGGATTTGGGATATACAATGATAAACAAGATTTTAAGAGAGGTGACACGCTGGGATATATCGATGCTTCCTTAGATGGTAGTATAGTTGGTTTAGATGTTATTGAAACTGCTCAGCCTGAACTGGTCCCGTTGATAATGCCTATAAACCTGGCTTTATCCGTAGTCCGGATGGGCATTGATGAAATTTATATGGGCGTACAGAATGAACTAAACAACCTCCCGAAAGATGCTGGACTTCTGGAGAAACTGGGGGCCGTTTCTTTAGGCTTTCTGAATGAGATTTGGGATTTTGACATTAGGGCGGCGAGTTTCTTTTATGATTGGCGTTACGATGAAATTGAGCAGGGACACATACTTGTTGCACAGATATCAGACTATCACAAATATTACAAAGTTACAAAGCAACAGGATGGAACGAGTGCCATTGATTTTAGCGGTGGCGACTCTTCTGGGAACGGAGGAGGAATTCACTTCTGCCTCACCGACCAGGGTCCGTCTGAACTCTGCATGGACTATTTTGTGTCTAGTAATGAGAGTTTTGGGAAAAGGTGTTGGCAGATTGATACACAGGGAAGCAAAGATATTATTCTTGGCCTGGGAGAGTCACAGCAGTTAGAGTACACAACACTACATAAGAAAATACTCTGGTTCATACCAGCCGGCTCTGTGACGGTGGTTTCAGGTGTTAAAGCTGTATCAGAGTCAAGGTTTGGGGAATACAAAGGACATAGAGATTCTAATCATTTTTTTGCAATTCAGAAAGCAGAGGATGAACATGTGATTGAAGTCATGTTAAGTTACTATTACAGGCTTTATGGTGAACCAGGTGATGACATATTCTTCCTCGGTCCACAGAGAAGTTATGTTGAAGGATGCGGAGGAAAAGACACGTACATTATTCCTAAAAATGGAGGGAAAACAACCATTAACAACTACGATCCTTCCAAAGCACTAGACACTCTTCATTTCAGTGTTAATTACAGTCACATTTCTGTGTCTAAATCTGGAAATGATGTTGTGTTAATGTATGAGGGAAGTCACACTGTGACCATAGAAGGATGGTTTTTAGGGGAACCGTATCGTCACATGAACATGTTGTCTGGAGACGGAGTCTTGTTTGAGATTTCCTCAGTCGTGGTTTCTTCTGTTCAGCTGGTGGCTGTAGGGGTTAACAAGATGTTTAGTTCTAGAAGTGAAAATGTGAATGCATCCGAGCCACTTTTAAGCAAAGTTACAAACGTCTTTGGGTCTCAGTATGACGATGTGATTGTTGGAAATGGAGAGAATAATATCatagatggaggaggaggtcatGATCAGTTAATGGGCGGTGAAGGAGAAGACATGTACATAGTGAAAGTCAGAAAACAGTCGTCAGTGTTGATTGAAAATACCTCCAAAGACACTAAAACAGACCTGGCCATAATAGAAGCAAAGCTTCACACTTTTAGAGTGGAAGTATTGTATGACAGTATTGTTCTGACAGCTCCCCACAACAACACGCCCATCAGGGTGACTTTAGGGAATTGGTTCAGATCAGCAGCAGACAGACATTTGCTTGTTGTCACAAAAGATTTGATCACTTTCACAATCTCAGATAACAAGGCCGACTGCCTGGACAGGAGAAACCTGTTCACCAAGTGTATTAAAAGTAGCAGCATCGACTACAGCAGCTCACCATCTCCTCTGCTGGTGGACCTACAGGAGGACGAGGCTTTTAGCAGCTTGACGGAGGTTCGCGGGTCAAAGTTCAACGATGTCATCAGAGGGAACAAAGAACACAATGTTATTGTcccaggaggaggagatgattTCATCCAgggtagaggaggagaggactGGTACGTTATCACGCCGGGCCAAGGAGTAAAAACCATCAACAATCAATCTCCAGATCTAGCCTTGGATATTCTCTTTCTGAAAGAAGAATACGAGAACATAAAGTGTTCTTGTGAAGGGCAGAGCATCATCATGTTGGTACATGGTAGAAAAGATGTTATTTTACAGAACTGGTTTGATTCAAAGTTTCATCAGCACCTGCAGATTAAAACCAGTGATGGAATAACAGCTGGACTGATGACCAACCGCAGCAGCTGTGATGACTCGTTAATGTTCCCTGTAACTGTTGATTATAGAAACCAGAAACCCAAGTGTGTCAGCCGTTTCCGAGTCTTCTATGGCCTTCAATGCACAATGATGAATATGATTAATCATGATTCAGTTAAAGAAATGTACGGTTCCTCAGGTTTCGACATCATGGTTGGAAACAGTAATGAGAATCTGCTTGATCCGTACACCGGAGGGGCACTGATGGTTGGAGGTGAAGGAAAAGACACTTACATAATCAAACAAGGATATGGAAACTCAATGATCGACAACTTTGCAGAAGATCAGAGTATTGATACTGTGTCGGTTGACATGGATTATCTTCATTGCAGTCAAGTCACACTGGACTCATCAACAGACGATCTGAAGGTGACAATCACATCAAAAGGGGAACAACTAAAATTCACTCTGCTCAACTACGCCAAAAGTTCCAAATATCAGCACTTAGTATTTCAAAGCTCTGACGGAGtgaattttaaattgaaatcacTAAACTCAACTGGTGATGTACCATTCTTTCAAATTGAAGCTTTCAAAGTGACTCTGAAACAGCTACAGGTTGACTGCCGCTTGGATCTCAACTCTCAGAGGAATCTGTCAAAGGTCCACACGGTGCAAGGCTGTCCCTCCCAGTCCAATGACATACTAGGTAACGATCAAGacaacgctctgattggtgggTGGAAGGATGACACCTTGGAAGGAGGCGCCGGAGATGACACGCTGATCGGAGGGAACGGAGACGACATCCTGATTGGTGGcttgggagatgacactctttATGGCGAGGACGGAAATGACACTATGATGGGAGACTCTGGCCGGGACGTCTTCCTTCCCGGACCAGGGGCCGGTGTGGTGGACGAGGGTACCTGGAGAACACGGTTGTGA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804057.1 True 6278 mRNA 0.44 7 41867239 41882013

Neighbor

gene id symbol gene type direction distance location
LOC120561103 NA coding downstream 8741 41837626 ~ 41858498 (-)
pold2 pold2 coding downstream 51333 41796261 ~ 41815906 (-)
bag4 NA coding downstream 270329 41588921 ~ 41596910 (-)
LOC120560239 LOC104917865,LOC103367618,LOC107092737,LOC102234380 coding downstream 284887 41572144 ~ 41582352 (-)
LOC120561099 NA coding downstream 318335 41537525 ~ 41548904 (-)
LOC120561107 rictor coding upstream 56968 41938981 ~ 42022357 (-)
LOC120561108 NA coding upstream 152210 42034223 ~ 42047509 (-)
LOC120560203 NA coding upstream 196573 42078586 ~ 42094518 (-)
LOC120561110 LOC104936293,LOC104940908 coding upstream 229735 42111748 ~ 42136339 (-)
LOC120560222 NA coding upstream 293463 42175476 ~ 42179298 (-)
G68918 NA non-coding downstream 2815 41863776 ~ 41864424 (-)
G68922 NA non-coding downstream 7727 41749134 ~ 41859512 (-)
G68901 NA non-coding downstream 8225 41828329 ~ 41859014 (-)
G68917 NA non-coding downstream 94512 41767003 ~ 41772727 (-)
G69062 NA non-coding downstream 122751 41743438 ~ 41744488 (-)
G69078 NA non-coding upstream 20888 41902901 ~ 41903622 (-)
G68927 NA non-coding upstream 45721 41927734 ~ 41928031 (-)
G68924 NA non-coding upstream 47222 41929235 ~ 41988063 (-)
G68902 NA non-coding upstream 53493 41935506 ~ 41936244 (-)
G69085 NA non-coding upstream 57133 41939146 ~ 41939524 (-)
G68897 NA other downstream 38106 41752536 ~ 41829133 (-)
G68907 NA other downstream 85077 41754872 ~ 41782162 (-)
LOC120560231 NA other downstream 465338 41319196 ~ 41401901 (-)
G68985 NA other downstream 789774 41076005 ~ 41077465 (-)
G68952 NA other downstream 916632 40924074 ~ 40950607 (-)
G68923 NA other upstream 46475 41928488 ~ 41929179 (-)
rnf34a NA other upstream 216314 42098327 ~ 42107122 (-)
G68921 NA other upstream 225617 42107630 ~ 42116261 (-)
G69104 NA other upstream 230779 42112792 ~ 42114759 (-)
G69105 NA other upstream 248598 42130611 ~ 42132581 (-)

Expression


Co-expression Network