LOC120561115


Basic Information

Item Value
gene id LOC120561115
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42822405 ~ 42854342 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804065.1
CTTAATGAGTGTGACAGCCAGCGGAAGTAAACAAGGCTGCTGGCCGTAGCGTTAGCTGCATGCTGCTGTTGAATGAGCTGGAAGACGGTATTGTAGTCGTAGAGCAGATGATTCTTTCAGCTGGAACTAAGCAACAATGTCTTCAGTTGAGTGTTTGAGAGAGTTTGTCACCGAGCgactaactgctgctgctgaagaaatattccgagttgttgaaaaaactaTCGTCGAGTACGAGGAAGAGATCGCTCGGCAGCGCAGACTGTTGGATGGCGTTTGGAGACCAGAAATCAGGTTACACAGGATAGAGCTCCTACAGCAACATGTCTGTGAGGAGGTTCTGTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGCCCAAGAGGACCCAGAGCCTCCACAGATTACAGAGGACCAGGAGGAACTGTGCACCAGTCAGGATGGAGAGCAGCTTGTACAGAAGCAGGAGACTGATACCTTTTGTCCTAGTAACAACGTAAACAACACTAACATGTCAGAGATTCACCGTAATACTCAAACAGAGCTCCCACAACAACATGTCTGTAAGGAGGAGGATGTACTCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGACCAGGAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTACGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGCTCAGACTCTGAACTTCAATCCTGATGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGTCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGGTCCTCTCTCACAACTCTGATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAACCAAAGAAGAGACGACGGAAGAGAAGAAGTTACAGTAACAACGTAGACAACACTAACGTGTCAGAGATTGACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCACCATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGTCCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCAACTAGAAATGCAGAGCCAGAAACAAAGAAGAGACGACGCAAGAGCAGAAGTCACAGCAACAACGTAGACAACACTAACGTGTCAGAGATTCACCCTAATACTCAAACAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCAGTCTGGACCAAGAGGATCCATATCCTCCACAGATTAAAGAGGACCAGAAGGAACTGTGcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGATACCTTTATGTTGACTCCTACTTATGAGGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGACACTCTATGTGCAGCAGAGAAGGAGTCTGTAGCCAACATGCCAGTTATTACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGTTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGACCAACTAGAAATGCAGAGCAAGAACCAAAGAAGAGACAACGCAGGAGCAGAAGTCACAGCAATAATGTAGACAACACTAACGTGTCAGAGATTCACCCTAAAACTCAAACAGACATGACTTTACCAAGAGGCATGTGTTGCTGTCCAGTTTGCTTAAAGGACTACGTGGCGCTATCAAACCACCTGCAGCGGGCCCACGGTGTCCACAATGTGGAGGAGCGAAAGATATTGCTAAATTTGGCGACCAGACGTGTGAACGTCCGGAATGAGGCTTGTCCAGTCTTGGGCTGTAGCTACCACAGCACGAGACTGGACAAGCATCTGAGGGATGGCCACCGGGAGCTGACCAGGGACGAGGTGGAGGTCAACCTGGACATGGCGAGAAGGACCAAGTCCATCTCCCTCCTCACTGCTTTGAGGAGAACTAATCCGACCGTCAGCATGTCGACAGGGCTCGACCTTGAGGAAGAAAACGAGGGCGACCAAATGGAGGTGCCAGGGGAGGCGGAGGAAGATGCCCCACAATGCCCAGACCCCAGCTCCATCCACAGCAAGGTGGAGGTCAAACGCCTGTCGGCACGCCTCCAGCTGGTGGAGAGAGAGCTAATGAACATGCGGAGCAAAAGCCAGAGGCTGGCCAAGAGGCTCCGTCGCAGCCAGGCAATGGCATCTGCCAGGACAGGAGACGCCAGCAGCTACGAGGAAGGAGATGGGGATAAAGAGGATGAGGTAGAGCACGAGGAGCAGCCTGCGCAGCTGACACCTCAGCAGCTGCTCACTTCTCAGCTGCTCACCCCTCAGCTGCTCACCCCTCAGCTGCACACCCCTCAGCTGCACACCCCTCAGCTGCTCACCCCTCAGCTGCTCACCCCTCAGCTGCTCACCCCTCAGCTGCTCACCCCTCAGCACACCCCTCAGCTGCACACCCCTCAGCCTCAGCagcatcttcctcctcctcaacacacacaggagcagctAGCCCCTTTTGGGAAGCAGCCTCCGTTCCTGTTGCTGGACCAGCAGGAAATGGAGCAGGAGCCAGGAACAAACCTGAAAAACCTCCTCCAGGGCAGCGGACGTAGCCCTGGAATGAGGAACCTGAAATTCCCTCCTTCAATTGGTAAGAAAGAAAAGTag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804065.1 True 2914 mRNA 0.52 8 42822405 42854342

Neighbor

gene id symbol gene type direction distance location
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 160386 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 551194 42262425 ~ 42271211 (-)
hpdb hpd,LOC103375816,LOC107092762,LOC101157460,LOC104940904,LOC106516708 coding downstream 565521 42241736 ~ 42256884 (-)
LOC120560212 NA coding downstream 609703 42209201 ~ 42212702 (-)
LOC120560222 NA coding downstream 643107 42175476 ~ 42179298 (-)
LOC120560194 NA coding upstream 19555 42873897 ~ 42958273 (-)
snapc4 NA coding upstream 251000 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 447277 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 454006 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 626619 43480961 ~ 43528118 (-)
G69184 NA non-coding downstream 3071 42780818 ~ 42819334 (-)
LOC120560255 NA non-coding downstream 50972 42768403 ~ 42771433 (-)
G69189 NA non-coding downstream 118413 42696173 ~ 42703992 (-)
G69175 NA non-coding downstream 166483 42653635 ~ 42655922 (-)
G69179 NA non-coding downstream 170999 42650291 ~ 42651406 (-)
LOC120560258 NA non-coding upstream 116124 42970466 ~ 42971625 (-)
G69250 NA non-coding upstream 152517 43006859 ~ 43096619 (-)
G69254 NA non-coding upstream 166790 43021132 ~ 43022838 (-)
G69258 NA non-coding upstream 183205 43037547 ~ 43038477 (-)
G69266 NA non-coding upstream 235299 43089641 ~ 43091900 (-)
LOC120561114 NA other downstream 12783 42663363 ~ 42809622 (-)
G69140 NA other downstream 285447 42497565 ~ 42536958 (-)
G69105 NA other downstream 689824 42130611 ~ 42132581 (-)
G68921 NA other downstream 706144 42107630 ~ 42116261 (-)
G69229 chek2 other upstream 115742 42970084 ~ 43014065 (-)
chek2 chek2,LOC102215705 other upstream 147913 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 221888 43076230 ~ 43099165 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 289046 43143388 ~ 43178989 (-)
G69249 NA other upstream 356677 43211019 ~ 43218894 (-)

Expression


Co-expression Network