LOC120560252


Basic Information

Item Value
gene id LOC120560252
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43528305 ~ 43530077 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639457.1
ATCCCAAACTAAGCCCCTCCCTGATGGTTTCTGTCCACTAGTCCAGACCTCGGAgctttatgtttttaaaatgtttgcagAAGAAGTTAGTTTTTAATTTTCTCCTgaacataaacacaaaaaaatatatcctGATTTTCAGAGGCAAGGCTTCTTTTATCATGTCAGTTGCCTAGCAACAATCCTCTCAGGATCATCGTGGGtgttaaggctgttttatgcttctgcgtcaacttCACGCCGTAGCTACGCCGTGGCTCCTACGGCATCGCGAGGCAGCGGGGTCTGAGGGGGGACCGTCGATTTGACACAGAAGCATATATCAGCCTTTAGACCCCAAACACAAAGGCCCAAACCTCCATACTTCATCCTTTATGATTCCTAATATTCagaatcattcattcataaacAGAATCATTCATCATTCATGAACAGAAAAGGCCAAAACTGGAAGATGTCAACAAATGcagaaagaaatgccaaaaacgtGGAAAAAAGCCACAAACCTTTTCCTACCTGCTGTTGTTTCCGTCTGTCTGACAGTAACCTGGTAAACCGTGTCCAGGTAAACCGTGACCAGGTAAACCATGACCAGGTAAACCATGACCAGGTAAACCGTGACCAGGTAAACCATGTTCAGGTAAACCCTGACCAGGTAAACCCTGACCAGGTAAACCGTGGCCAGGTAAACCATGTTCAGGTAAACCCTGACCAGGTAAACCCTGACCAGGTAAACCGCGACTAGGTAAACCATGACCAGGTGAACCGTGACCAGGTGAACCGTGACCAGGTGAACCATGTTCAGGTAAACCCTGACCAGGTAAACCCTGACCAGGTAAACCGTGACCAGGTAAACCATGTTCAGGTAAACCCTGACCAGGTAAACCCTGACCAGGTAAACCGTGACTAGGTAAACCATGACCAGGTGAACCGTGACCAGGTAAACCGTGTCCAGGTAAACCGTGACTAGGTAAACTGTGACCAGGTAAACCCTGACCAGGTGAACTGTGTCCAGGTGATTTTCGTTAAACGGTTCTGTCTTCATTAGATCTCAGCCTGAAGCTTCACATTAACTTCCTCTGAGTTCACTGttctgtattttctttcttgCACTATTGTCCCGTTCAGTATATCTATGCAAACATCAACGGCCAATCggcacacagaaacaaacatcaACAGCAAATTAGCACGCAGAAACAAACTGATAATCGGCAGAGTGACAGATGTTTTCATATTCTgctttttagttttgtttttgatttaaaATTCTGGGCAAAATTCTtctattttacttttattttgtgtaaatCTGCGTGTGCAGATTGCGTGTGTCCTCTGGTGATGAGGagttaacatgtttaaaactaaaataataaaatgtataaatgttcaaatgttaATGACATCAGAGTTAGCTTGAAGCTAACCCAGCCCATTGGTTTGAATGAGGAATGAGTGCAAAAGGTCTCGGAGATGTTAAATTGTCACTCTGTCACTTTAAACCTCACTGCCATGGTAACCACGCTCCCCTCCCATTGGCCTGTTGCTGACGGTTGTTTTGATGATGTCACTGTTTGTTTGCCTTTTTTCTGTTTagctgaaccaatcagctgccagctttctctggaataaaaaaaaactgttgttcaa

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639457.1 True 1653 lncRNA 0.43 2 43528305 43530077

Neighbor

gene id symbol gene type direction distance location
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding downstream 187 43480961 ~ 43528118 (-)
LOC120561121 NA coding downstream 217458 43308348 ~ 43310847 (-)
LOC120561120 NA coding downstream 223859 43301619 ~ 43304446 (-)
snapc4 NA coding downstream 386752 43105342 ~ 43141553 (-)
LOC120560194 NA coding downstream 570032 42873897 ~ 42958273 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 27640 43557717 ~ 43582312 (-)
LOC120560219 NA coding upstream 59967 43590044 ~ 43651535 (-)
endog endog coding upstream 279552 43809629 ~ 43821302 (-)
LOC120560874 ntng2 coding upstream 302320 43832397 ~ 43868090 (-)
G69372 NA non-coding downstream 16935 43509948 ~ 43511370 (-)
G69371 NA non-coding downstream 43786 43484110 ~ 43484519 (-)
G69340 NA non-coding downstream 77813 43266817 ~ 43450492 (-)
G69376 NA non-coding upstream 26223 43556300 ~ 43557432 (-)
LOC120560250 NA non-coding upstream 28301 43558378 ~ 43562599 (-)
G69378 NA non-coding upstream 35362 43565439 ~ 43566214 (-)
G69379 NA non-coding upstream 54844 43584921 ~ 43585345 (-)
G69404 NA non-coding upstream 120068 43650145 ~ 43650465 (-)
G69356 LOC106941104,LOC103460379 other downstream 147706 43371767 ~ 43380599 (-)
LOC120561119 LOC102192266,LOC107386210,LOC101154874,LOC101486486 other downstream 276993 43223477 ~ 43251312 (-)
G69249 NA other downstream 309411 43211019 ~ 43218894 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other downstream 349316 43143388 ~ 43178989 (-)
card9 card9,LOC108245830 other downstream 429140 43076230 ~ 43099165 (-)
phf19 phf19 other upstream 1156 43531233 ~ 43551988 (-)
LOC120560198 LOC106532130,LOC103370617,LOC108248104 other upstream 135710 43665787 ~ 43709261 (-)

Expression


Co-expression Network