LOC120560258


Basic Information

Item Value
gene id LOC120560258
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42970466 ~ 42971625 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639465.1
cctgaacacacctctgaCCCAGcgAAGGATGTGGTCAGGAAGCTGCTGGTAGTTGACCCCAGTAAGAGGATGACTATAGATGAAGCTCTGCAGCATCCCTGGCTCCAGGATGATGTCATGATGAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639465.1 True 128 lncRNA 0.52 3 42970466 42971625

Neighbor

gene id symbol gene type direction distance location
LOC120560194 NA coding downstream 12193 42873897 ~ 42958273 (-)
LOC120561115 NA coding downstream 116124 42822405 ~ 42854342 (-)
LOC120560237 NA coding downstream 147821 42819874 ~ 42822645 (-)
LOC120560234 plpp7,LOC107097912,LOC106531399,LOC103368069,LOC105917130,LOC101484670,LOC108248082 coding downstream 308447 42658356 ~ 42662019 (-)
LOC120560191 NA coding downstream 699255 42262425 ~ 42271211 (-)
snapc4 NA coding upstream 133717 43105342 ~ 43141553 (-)
LOC120561120 NA coding upstream 329994 43301619 ~ 43304446 (-)
LOC120561121 NA coding upstream 336723 43308348 ~ 43310847 (-)
LOC120560199 LOC108248098,LOC101175325,LOC102290088,LOC101464010,LOC103156294,LOC103460382,LOC102193617 coding upstream 509336 43480961 ~ 43528118 (-)
fibcd1a fibcd1,LOC102791113,LOC101470696 coding upstream 586092 43557717 ~ 43582312 (-)
G69184 NA non-coding downstream 151132 42780818 ~ 42819334 (-)
LOC120560255 NA non-coding downstream 199033 42768403 ~ 42771433 (-)
G69189 NA non-coding downstream 266474 42696173 ~ 42703992 (-)
G69175 NA non-coding downstream 314544 42653635 ~ 42655922 (-)
G69179 NA non-coding downstream 319060 42650291 ~ 42651406 (-)
G69250 NA non-coding upstream 35234 43006859 ~ 43096619 (-)
G69254 NA non-coding upstream 49507 43021132 ~ 43022838 (-)
G69258 NA non-coding upstream 65922 43037547 ~ 43038477 (-)
G69266 NA non-coding upstream 118016 43089641 ~ 43091900 (-)
G69246 NA non-coding upstream 132335 43103960 ~ 43104752 (-)
LOC120561114 NA other downstream 160844 42663363 ~ 42809622 (-)
G69140 NA other downstream 433508 42497565 ~ 42536958 (-)
G69105 NA other downstream 837885 42130611 ~ 42132581 (-)
G68921 NA other downstream 854205 42107630 ~ 42116261 (-)
G69104 NA other downstream 855707 42112792 ~ 42114759 (-)
chek2 chek2,LOC102215705 other upstream 30630 43002255 ~ 43025050 (-)
card9 card9,LOC108245830 other upstream 104605 43076230 ~ 43099165 (-)
pomt1 pomt1,LOC103397945,LOC102782456,LOC103398975 other upstream 171763 43143388 ~ 43178989 (-)
G69249 NA other upstream 239394 43211019 ~ 43218894 (-)
LOC120561119 LOC102192266,LOC107386210,LOC101154874,LOC101486486 other upstream 251852 43223477 ~ 43251312 (-)

Expression


Co-expression Network