Gene
RNA
| Item | Value |
|---|---|
| gene id | G282950 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 15270994 ~ 15271200 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU335298 | True | 207 | lncRNA | 0.50 | 1 | 15270994 | 15271200 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113532267 | muc19,LOC108280038 | coding | downstream | 7601 | 15236542 ~ 15263393 (-) |
| LOC113532243 | LOC108279995 | coding | downstream | 34684 | 15213936 ~ 15236310 (-) |
| LOC113532053 | LOC108279522 | coding | downstream | 132517 | 15122734 ~ 15138477 (-) |
| LOC113531721 | iapp | coding | downstream | 152433 | 15116227 ~ 15118561 (-) |
| pyroxd1 | pyroxd1,LOC108279593 | coding | downstream | 159729 | 15101356 ~ 15111265 (-) |
| LOC113532250 | NA | coding | upstream | 54173 | 15325373 ~ 15336933 (-) |
| alg10 | alg10,LOC108427075 | coding | upstream | 267857 | 15539057 ~ 15544883 (-) |
| srr | LOC108279919,LOC108427077,LOC107726835,LOC105418280 | coding | upstream | 283073 | 15554273 ~ 15563716 (-) |
| cerk | cerk | coding | upstream | 485106 | 15756306 ~ 15778944 (-) |
| brd1a | brd1 | coding | upstream | 1098469 | 16369669 ~ 16389481 (-) |
| LOC113532334 | NA | non-coding | downstream | 57739 | 15209348 ~ 15213255 (-) |
| G282718 | NA | non-coding | downstream | 164999 | 14812922 ~ 15105995 (-) |
| G282673 | NA | non-coding | downstream | 531557 | 14739216 ~ 14739437 (-) |
| G282649 | NA | non-coding | downstream | 539990 | 14715045 ~ 14731004 (-) |
| G282410 | NA | non-coding | downstream | 880437 | 14389823 ~ 14390557 (-) |
| G282999 | NA | non-coding | upstream | 79506 | 15350706 ~ 15353441 (-) |
| G283022 | NA | non-coding | upstream | 116748 | 15387948 ~ 15390101 (-) |
| G283081 | NA | non-coding | upstream | 246024 | 15517224 ~ 15521690 (-) |
| G283218 | NA | non-coding | upstream | 483117 | 15754317 ~ 15754605 (-) |
| G283307 | NA | non-coding | upstream | 771162 | 16042362 ~ 16042579 (-) |
| LOC113531972 | muc19,LOC108280038 | other | downstream | 86919 | 15139925 ~ 15184075 (-) |
| dusp16 | dusp16 | other | downstream | 3518081 | 11721063 ~ 11752913 (-) |
| G281092 | mansc1 | other | downstream | 3610667 | 11657890 ~ 11660327 (-) |
| G281074 | rad51ap1 | other | downstream | 3682970 | 11586304 ~ 11588024 (-) |
| vegfab | vegfa,LOC108435123 | other | downstream | 4011582 | 11238935 ~ 11259412 (-) |
| alg12 | alg12 | other | upstream | 1129721 | 16400921 ~ 16406863 (-) |
| LOC113532230 | LOC108280029,LOC107562148,LOC107687569,LOC107741714,LOC105912408 | other | upstream | 1567335 | 16838535 ~ 16853395 (-) |
| phf21b | phf21b | other | upstream | 1687312 | 16958512 ~ 17027865 (-) |
| LOC113532261 | smkr1 | other | upstream | 2707563 | 17978763 ~ 17988280 (-) |
| ahcyl2b | ahcyl2,LOC106609228 | other | upstream | 2756534 | 18027734 ~ 18067585 (-) |
