G63907


Basic Information

Item Value
gene id G63907
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 13450437 ~ 13467402 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU75699
TTTGGATACTCTACCCACCTCTGAgcgatgtaaatgtaaaatgtaaatcagtaaAACTTTTCACACCTGCTAACACAACCAATTTTCATGTCCTGTGATGTAAAACACtcctttaaaaacaacaaacatgcTGCTTTCTGCTACACAGAATCCCCAGAAAAAAATTACGGAGAGAAGGTTTGAATCTTTCTATCACTGAGATTAACAACGTTCGTAATTAGATAGTAAACCAATAAAAACAAGGCTTAAAGGCTTTAACAGCAGCTATATGGTTTATTTATCAAATTGTTGCAAGGGGAACAAACATTGTTGCAAAGCTAAAGCAATATTCAAAAGTCATTAAGACTGGTTAATATAacagaaatgtatatttatattcactTTTGTCATCGTGTGATCAGAACTTAAGGTGAACAGTGTGAAATAAAGGTGAACAATATGCACTGAAGTGATTAAATTGTAAATGCTGAGATTTAACATTTGAACTTTGAAGCAGCAAAGGATCAGCTAGCCTATAACCTGCTGAGTGATCACAGTGGCACTAGTGCCAGCTCGAGCACGAATCTTAATTTCACGTGCCATTTGGCACCAGGCACAGGTGTAGCAGAAACACACAGTACAGCAGTCATCACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75699 True 635 lncRNA 0.37 2 13450437 13467402

Neighbor

gene id symbol gene type direction distance location
si:ch73-335l21.4 LOC108268348 coding downstream 60472 13388333 ~ 13389965 (-)
tm4sf5 tm4sf5,LOC108442834,LOC108410825 coding downstream 182612 13264271 ~ 13267825 (-)
sst5 LOC108267674 coding downstream 206671 13242669 ~ 13243766 (-)
bcl6b LOC108267673 coding downstream 227307 13216900 ~ 13223130 (-)
LOC113540725 NA coding downstream 245975 13204273 ~ 13204462 (-)
ntn5 LOC108267835 coding upstream 38339 13505741 ~ 13521526 (-)
cnpy4 cnpy4 coding upstream 60484 13527886 ~ 13533264 (-)
usp12b LOC101154659,LOC107707922,LOC108412583,LOC106934565,LOC101071205 coding upstream 217334 13684736 ~ 13695000 (-)
col4a5 col4a5,LOC106608922 coding upstream 279837 13747239 ~ 13797445 (-)
sema4f sema4f,LOC108267878 coding upstream 445281 13912683 ~ 13967911 (-)
G63920 NA non-coding downstream 7607 13442529 ~ 13442830 (-)
G63913 NA non-coding downstream 31907 13418312 ~ 13418530 (-)
G63866 slc16a13 non-coding downstream 170663 13278536 ~ 13279774 (-)
LOC113540618 NA non-coding downstream 191069 13251977 ~ 13259368 (-)
G63793 trip6 non-coding downstream 215489 13232733 ~ 13234948 (-)
G64163 NA non-coding upstream 86686 13554088 ~ 13554346 (-)
G64164 NA non-coding upstream 87462 13554864 ~ 13555077 (-)
G64147 NA non-coding upstream 97231 13564633 ~ 13569597 (-)
LOC117597078 NA non-coding upstream 248923 13716325 ~ 13723916 (-)
G64222 NA non-coding upstream 271187 13738589 ~ 13743598 (-)
zgc:194312 LOC108267841 other downstream 9917 13436056 ~ 13440520 (-)
acap1 acap1,LOC107731905,LOC107683535,LOC107595305,LOC107675497 other downstream 141959 13285999 ~ 13308478 (-)
tmem256 tmem256,LOC107659713,LOC107564775,LOC107560291 other downstream 960875 12484723 ~ 12489562 (-)
LOC113539775 NA other downstream 1172768 12272218 ~ 12277669 (-)
si:dkey-165a24.9 si:dkey-165a24.9,LOC108267153,LOC108434867,LOC105903083,LOC107572570,LOC107753961,LOC107659726,LOC107588125 other downstream 1200683 12246962 ~ 12249754 (-)
G64436 NA other upstream 765407 14232809 ~ 14243681 (-)
tbc1d19 tbc1d19,LOC107660707 other upstream 2412069 15879471 ~ 15904355 (-)
smim20 NA other upstream 2506177 15973579 ~ 15991985 (-)
acox3 acox3 other upstream 2587126 16054528 ~ 16071692 (-)
tnfsf12 tnfsf12 other upstream 2951762 16419164 ~ 16426624 (-)

Expression


Co-expression Network