G68740 (mrc1)


Basic Information

Item Value
gene id G68740
gene name mrc1
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 21828273 ~ 21828833 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU81559
gTCAATAAAGCACAGCTCTGAGAATAAAAATATGGTGGTATACAGTCTATGAACATTTACATTGTCCTATATTATCTTGAACATTTTTAGGATTAAAGAAAGTACTATAAGATGTAAATAAGCAACATGTGATTTCATCACCTCATGTTTTGTGTATTACTCTACTAAATATTGAGCAGACATCTTCCTACTACCAAGCAGATTGGTGATGTACAAAATTCATCTATACAtcttgattatttaaaaaacacatttttcttttgtgtaatTAACATAGAAATTTGTTGtaacactgtgtgtgcgtgtgtgtgtgttatgcatgCTCATTTTGTTCCATGTTGGTAACCAGTCCCTTGGTGTCTACTGTAGTGGTAGATCGTGCAGGGTTGTTAAAGTAGAGTGTGTTATCAAACGTACACTCCCCGACTACTGGGATAGTTGGTCTTTTATAGAAGAGGAAGGCAGCCAGTCCTGCTACAGCAATTATCACCAATACAACTGCTACAGCGATACCAGTGTAGCCATGAGAGGCTTCTTCCA

Function

symbol description
mrc1 Enables cargo receptor activity. Involved in receptor-mediated endocytosis. Located in endosome membrane and plasma membrane.

NR:

description
BAG family molecular chaperone regulator 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81559 True 540 lncRNA 0.37 2 21828273 21828833

Neighbor

gene id symbol gene type direction distance location
hacd1 hacd1,LOC107702201,LOC107571282,LOC107568855 coding downstream 42898 21777876 ~ 21785375 (-)
tyms tyms coding downstream 70546 21748835 ~ 21757727 (-)
adcyap1a LOC108268182 coding downstream 92515 21730195 ~ 21735758 (-)
smchd1 smchd1 coding downstream 204641 21582222 ~ 21623632 (-)
emilin2b LOC108267875 coding downstream 247730 21554526 ~ 21580543 (-)
nsun6 nsun6 coding upstream 88380 21917213 ~ 21933593 (-)
chpf2 chpf2,LOC107724403,LOC107684493 coding upstream 416397 22245230 ~ 22252384 (-)
garem garem1 coding upstream 488632 22317465 ~ 22326808 (-)
dph2 dph2,LOC105920302 coding upstream 509920 22338753 ~ 22345651 (-)
mcur1 LOC108268156,LOC108440645 coding upstream 517102 22345935 ~ 22354577 (-)
G68585 NA non-coding downstream 326840 21496932 ~ 21501433 (-)
G68577 NA non-coding downstream 352497 21474587 ~ 21475776 (-)
G68520 NA non-coding downstream 355241 21472819 ~ 21473032 (-)
G68519 NA non-coding downstream 356434 21471632 ~ 21471839 (-)
G68495 NA non-coding downstream 420066 21407111 ~ 21408207 (-)
G68741 NA non-coding upstream 1243 21830076 ~ 21830642 (-)
G68743 NA non-coding upstream 6389 21835222 ~ 21835426 (-)
G68744 NA non-coding upstream 6937 21835770 ~ 21835995 (-)
LOC117597088 NA non-coding upstream 11648 21840481 ~ 21843581 (-)
G68752 NA non-coding upstream 17552 21846385 ~ 21846728 (-)
LOC113539989 LOC108436138 other downstream 457263 21354619 ~ 21371010 (-)
G68462 NA other downstream 499023 21326046 ~ 21329250 (-)
chchd7 chchd7 other downstream 514376 21304692 ~ 21313897 (-)
znf16l LOC108268318 other downstream 1002753 20778538 ~ 20825520 (-)
snrpf snrpf,LOC106609479,LOC107738052 other downstream 1862422 19962582 ~ 19965851 (-)
G68760 NA other upstream 105693 21934526 ~ 21935169 (-)
LOC113540019 LOC108268143 other upstream 800782 22629615 ~ 22636088 (-)
lrrcc1 lrrcc1 other upstream 1463215 23292048 ~ 23306934 (-)
retreg1 fam134b other upstream 1502183 23331016 ~ 23346573 (-)
LOC117597073 LOC108267227,LOC108267226 other upstream 1651132 23479965 ~ 23483850 (-)

Expression


Co-expression Network