Gene
RNA
| Item | Value |
|---|---|
| gene id | G68752 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21846385 ~ 21846728 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU81571 | True | 344 | lncRNA | 0.44 | 1 | 21846385 | 21846728 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hacd1 | hacd1,LOC107702201,LOC107571282,LOC107568855 | coding | downstream | 61010 | 21777876 ~ 21785375 (-) |
| tyms | tyms | coding | downstream | 88658 | 21748835 ~ 21757727 (-) |
| adcyap1a | LOC108268182 | coding | downstream | 110627 | 21730195 ~ 21735758 (-) |
| smchd1 | smchd1 | coding | downstream | 222753 | 21582222 ~ 21623632 (-) |
| emilin2b | LOC108267875 | coding | downstream | 265842 | 21554526 ~ 21580543 (-) |
| nsun6 | nsun6 | coding | upstream | 70485 | 21917213 ~ 21933593 (-) |
| chpf2 | chpf2,LOC107724403,LOC107684493 | coding | upstream | 398502 | 22245230 ~ 22252384 (-) |
| garem | garem1 | coding | upstream | 470737 | 22317465 ~ 22326808 (-) |
| dph2 | dph2,LOC105920302 | coding | upstream | 492025 | 22338753 ~ 22345651 (-) |
| mcur1 | LOC108268156,LOC108440645 | coding | upstream | 499207 | 22345935 ~ 22354577 (-) |
| LOC117597088 | NA | non-coding | downstream | 2804 | 21840481 ~ 21843581 (-) |
| G68744 | NA | non-coding | downstream | 10390 | 21835770 ~ 21835995 (-) |
| G68743 | NA | non-coding | downstream | 10959 | 21835222 ~ 21835426 (-) |
| G68741 | NA | non-coding | downstream | 15743 | 21830076 ~ 21830642 (-) |
| G68740 | mrc1 | non-coding | downstream | 17552 | 21828273 ~ 21828833 (-) |
| G68758 | NA | non-coding | upstream | 98884 | 21945612 ~ 21946237 (-) |
| G68907 | NA | non-coding | upstream | 323352 | 22170080 ~ 22173974 (-) |
| G68923 | NA | non-coding | upstream | 341455 | 22188183 ~ 22188763 (-) |
| G69124 | NA | non-coding | upstream | 532567 | 22379295 ~ 22379533 (-) |
| G69128 | NA | non-coding | upstream | 562875 | 22409603 ~ 22452697 (-) |
| LOC113539989 | LOC108436138 | other | downstream | 475375 | 21354619 ~ 21371010 (-) |
| G68462 | NA | other | downstream | 517135 | 21326046 ~ 21329250 (-) |
| chchd7 | chchd7 | other | downstream | 532488 | 21304692 ~ 21313897 (-) |
| znf16l | LOC108268318 | other | downstream | 1020865 | 20778538 ~ 20825520 (-) |
| snrpf | snrpf,LOC106609479,LOC107738052 | other | downstream | 1880534 | 19962582 ~ 19965851 (-) |
| G68760 | NA | other | upstream | 87798 | 21934526 ~ 21935169 (-) |
| LOC113540019 | LOC108268143 | other | upstream | 782887 | 22629615 ~ 22636088 (-) |
| lrrcc1 | lrrcc1 | other | upstream | 1445320 | 23292048 ~ 23306934 (-) |
| retreg1 | fam134b | other | upstream | 1484288 | 23331016 ~ 23346573 (-) |
| LOC117597073 | LOC108267227,LOC108267226 | other | upstream | 1633237 | 23479965 ~ 23483850 (-) |
