Gene
RNA
| Item | Value |
|---|---|
| gene id | G69503 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23278575 ~ 23278782 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82439 | True | 208 | lncRNA | 0.46 | 1 | 23278575 | 23278782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-106h4.9 | LOC108267629 | coding | downstream | 15278 | 23230050 ~ 23263297 (-) |
| mrc1b | LOC108268341 | coding | downstream | 104196 | 23150126 ~ 23174379 (-) |
| clul1 | clul1 | coding | downstream | 228462 | 23041108 ~ 23050113 (-) |
| adcyap1b | LOC100304507 | coding | downstream | 287959 | 22986661 ~ 22990616 (-) |
| emilin2a | LOC108268130 | coding | downstream | 427417 | 22838027 ~ 22851158 (-) |
| e2f5 | LOC108268108,LOC108437220 | coding | upstream | 6254 | 23285036 ~ 23291998 (-) |
| and2 | LOC108267411 | coding | upstream | 39753 | 23318535 ~ 23322611 (-) |
| nol7 | NA | coding | upstream | 97674 | 23376456 ~ 23382888 (-) |
| LOC113540008 | NA | coding | upstream | 130632 | 23409414 ~ 23418890 (-) |
| LOC117597115 | NA | coding | upstream | 151518 | 23430300 ~ 23442743 (-) |
| LOC117597081 | NA | non-coding | downstream | 4961 | 23272162 ~ 23273614 (-) |
| G69320 | NA | non-coding | downstream | 223192 | 23054514 ~ 23055383 (-) |
| G69254 | NA | non-coding | downstream | 469326 | 22808906 ~ 22809249 (-) |
| G69248 | LOC108268132,LOC108440660,LOC107664077,LOC107746915 | non-coding | downstream | 472667 | 22803386 ~ 22805908 (-) |
| G69233 | NA | non-coding | downstream | 506563 | 22771386 ~ 22772012 (-) |
| G69551 | NA | non-coding | upstream | 117882 | 23396664 ~ 23397963 (-) |
| LOC113540115 | NA | non-coding | upstream | 174451 | 23453233 ~ 23454221 (-) |
| G69649 | NA | non-coding | upstream | 315549 | 23594331 ~ 23594544 (-) |
| G69691 | NA | non-coding | upstream | 372269 | 23651051 ~ 23651866 (-) |
| G69916 | NA | non-coding | upstream | 643324 | 23922106 ~ 23922538 (-) |
| LOC113540019 | LOC108268143 | other | downstream | 642487 | 22629615 ~ 22636088 (-) |
| G68760 | NA | other | downstream | 1343406 | 21934526 ~ 21935169 (-) |
| LOC113539989 | LOC108436138 | other | downstream | 1907565 | 21354619 ~ 21371010 (-) |
| G68462 | NA | other | downstream | 1949325 | 21326046 ~ 21329250 (-) |
| chchd7 | chchd7 | other | downstream | 1964678 | 21304692 ~ 21313897 (-) |
| lrrcc1 | lrrcc1 | other | upstream | 13266 | 23292048 ~ 23306934 (-) |
| retreg1 | fam134b | other | upstream | 52234 | 23331016 ~ 23346573 (-) |
| LOC117597073 | LOC108267227,LOC108267226 | other | upstream | 201183 | 23479965 ~ 23483850 (-) |
| G69592 | LOC108267226,LOC108267227 | other | upstream | 214597 | 23493379 ~ 23493919 (-) |
| LOC117597074 | NA | other | upstream | 216253 | 23495035 ~ 23495897 (-) |
