Gene
RNA
| Item | Value |
|---|---|
| gene id | G69592 |
| gene name | LOC108267226,LOC108267227 |
| gene type | unknown |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23493379 ~ 23493919 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC108267226 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82579 | True | 389 | TUCP | 0.43 | 2 | 23493379 | 23493919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113540011 | NA | coding | downstream | 29654 | 23446805 ~ 23463725 (-) |
| LOC117597115 | NA | coding | downstream | 50636 | 23430300 ~ 23442743 (-) |
| LOC113540008 | NA | coding | downstream | 74489 | 23409414 ~ 23418890 (-) |
| nol7 | NA | coding | downstream | 110491 | 23376456 ~ 23382888 (-) |
| and2 | LOC108267411 | coding | downstream | 170768 | 23318535 ~ 23322611 (-) |
| LOC113540016 | NA | coding | upstream | 43509 | 23537428 ~ 23544732 (-) |
| amph | amph | coding | upstream | 53251 | 23547170 ~ 23583496 (-) |
| fam49ba | LOC108267758,LOC106592588,LOC107713994,LOC107718035,LOC107657432,LOC107556887 | coding | upstream | 264465 | 23758384 ~ 23782113 (-) |
| asap1a | LOC108267580,LOC108437251 | coding | upstream | 290179 | 23784098 ~ 23843304 (-) |
| ubtfl | ubtfl,LOC108267581,LOC107718032 | coding | upstream | 351125 | 23845044 ~ 23858386 (-) |
| LOC113540115 | NA | non-coding | downstream | 39158 | 23453233 ~ 23454221 (-) |
| G69551 | NA | non-coding | downstream | 95416 | 23396664 ~ 23397963 (-) |
| G69503 | NA | non-coding | downstream | 214597 | 23278575 ~ 23278782 (-) |
| LOC117597081 | NA | non-coding | downstream | 219765 | 23272162 ~ 23273614 (-) |
| G69320 | NA | non-coding | downstream | 437996 | 23054514 ~ 23055383 (-) |
| G69649 | NA | non-coding | upstream | 100412 | 23594331 ~ 23594544 (-) |
| G69691 | NA | non-coding | upstream | 157132 | 23651051 ~ 23651866 (-) |
| G69916 | NA | non-coding | upstream | 428187 | 23922106 ~ 23922538 (-) |
| LOC117597086 | NA | non-coding | upstream | 437414 | 23931333 ~ 23932235 (-) |
| G70025 | NA | non-coding | upstream | 644374 | 24138293 ~ 24138492 (-) |
| LOC117597073 | LOC108267227,LOC108267226 | other | downstream | 9529 | 23479965 ~ 23483850 (-) |
| retreg1 | fam134b | other | downstream | 146806 | 23331016 ~ 23346573 (-) |
| lrrcc1 | lrrcc1 | other | downstream | 186445 | 23292048 ~ 23306934 (-) |
| LOC113540019 | LOC108268143 | other | downstream | 857291 | 22629615 ~ 22636088 (-) |
| G68760 | NA | other | downstream | 1558210 | 21934526 ~ 21935169 (-) |
| LOC117597074 | NA | other | upstream | 1116 | 23495035 ~ 23495897 (-) |
| LOC117597075 | LOC108267226,LOC108267227 | other | upstream | 2038 | 23495957 ~ 23497021 (-) |
| LOC113540012 | NA | other | upstream | 19537 | 23513456 ~ 23514039 (-) |
| LOC117597116 | NA | other | upstream | 20455 | 23514374 ~ 23514935 (-) |
| LOC113540114 | LOC108267227 | other | upstream | 21780 | 23515699 ~ 23516359 (-) |
