Gene
RNA
| Item | Value |
|---|---|
| gene id | G69691 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23651051 ~ 23651866 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82692 | True | 816 | lncRNA | 0.38 | 1 | 23651051 | 23651866 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| amph | amph | coding | downstream | 67555 | 23547170 ~ 23583496 (-) |
| LOC113540016 | NA | coding | downstream | 106319 | 23537428 ~ 23544732 (-) |
| LOC113540113 | LOC108267226 | coding | downstream | 145870 | 23466417 ~ 23505181 (-) |
| LOC113540011 | NA | coding | downstream | 187326 | 23446805 ~ 23463725 (-) |
| LOC117597115 | NA | coding | downstream | 208308 | 23430300 ~ 23442743 (-) |
| fam49ba | LOC108267758,LOC106592588,LOC107713994,LOC107718035,LOC107657432,LOC107556887 | coding | upstream | 106518 | 23758384 ~ 23782113 (-) |
| asap1a | LOC108267580,LOC108437251 | coding | upstream | 132232 | 23784098 ~ 23843304 (-) |
| ubtfl | ubtfl,LOC108267581,LOC107718032 | coding | upstream | 193178 | 23845044 ~ 23858386 (-) |
| slc4a2a | slc4a2,LOC108413474 | coding | upstream | 208006 | 23859872 ~ 23899907 (-) |
| ttc19 | ttc19 | coding | upstream | 255293 | 23907159 ~ 23919306 (-) |
| G69649 | NA | non-coding | downstream | 56507 | 23594331 ~ 23594544 (-) |
| LOC113540115 | NA | non-coding | downstream | 196830 | 23453233 ~ 23454221 (-) |
| G69551 | NA | non-coding | downstream | 253088 | 23396664 ~ 23397963 (-) |
| G69503 | NA | non-coding | downstream | 372269 | 23278575 ~ 23278782 (-) |
| LOC117597081 | NA | non-coding | downstream | 377437 | 23272162 ~ 23273614 (-) |
| G69916 | NA | non-coding | upstream | 270240 | 23922106 ~ 23922538 (-) |
| LOC117597086 | NA | non-coding | upstream | 279467 | 23931333 ~ 23932235 (-) |
| G70025 | NA | non-coding | upstream | 486427 | 24138293 ~ 24138492 (-) |
| G70026 | NA | non-coding | upstream | 493712 | 24145578 ~ 24145784 (-) |
| G70027 | NA | non-coding | upstream | 494024 | 24145890 ~ 24146241 (-) |
| LOC117597117 | NA | other | downstream | 119035 | 23531238 ~ 23532016 (-) |
| LOC113540013 | NA | other | downstream | 133381 | 23516930 ~ 23517670 (-) |
| LOC113540114 | LOC108267227 | other | downstream | 134692 | 23515699 ~ 23516359 (-) |
| LOC117597116 | NA | other | downstream | 136116 | 23514374 ~ 23514935 (-) |
| LOC113540012 | NA | other | downstream | 137012 | 23513456 ~ 23514039 (-) |
| G70255 | rnf220 | other | upstream | 652508 | 24304374 ~ 24304926 (-) |
| ccdc24 | ccdc24 | other | upstream | 913875 | 24565741 ~ 24586048 (-) |
| ltb4r2b | NA | other | upstream | 2720055 | 26371921 ~ 26376408 (-) |
| G71596 | NA | other | upstream | 2820214 | 26472080 ~ 26551030 (-) |
| G71832 | NA | other | upstream | 3444736 | 27096602 ~ 27100858 (-) |
