Item | Value |
---|---|
gene id | G69878 |
gene name | abcf2,abcf2a,LOC107599875,LOC107657436,LOC107709809 |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 23940241 ~ 23943072 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
symbol | description |
---|---|
abcf2a | Predicted to enable ATP binding activity. Is expressed in neuromast. Orthologous to human ABCF2 (ATP binding cassette subfamily F member 2). |
abcf2 | Predicted to enable ATP binding activity. Located in membrane. |
description |
---|
PREDICTED: ATP-binding cassette sub-family F member 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU82909 | True | 769 | lncRNA | 0.50 | 3 | 23940241 | 23943072 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
mycb | LOC108268289 | coding | upstream | 289608 | 23648271 ~ 23650633 (+) |
ankhb | ankh,ankhb,LOC108437249,LOC107657429,LOC107713990 | coding | upstream | 298772 | 23614440 ~ 23641469 (+) |
otulinb | LOC108268091 | coding | upstream | 332040 | 23594961 ~ 23608201 (+) |
stard3nl | stard3nl,LOC107713985 | coding | upstream | 538511 | 23392658 ~ 23401730 (+) |
epdr1 | LOC108267170,LOC107664036,LOC107558964,LOC108437243,LOC107713986 | coding | upstream | 549240 | 23387009 ~ 23391001 (+) |
LOC113540051 | NA | coding | downstream | 70784 | 24013856 ~ 24016743 (+) |
LOC113540619 | NA | coding | downstream | 77993 | 24021065 ~ 24024165 (+) |
zgc:136930 | LOC108267402,LOC107599883,LOC107733879,LOC108430265,LOC107657418,LOC107559002 | coding | downstream | 178481 | 24121553 ~ 24127236 (+) |
ccr9a | LOC108267400 | coding | downstream | 191604 | 24134676 ~ 24136808 (+) |
LOC113540392 | NA | coding | downstream | 202010 | 24145082 ~ 24148968 (+) |
G69870 | NA | non-coding | upstream | 17545 | 23921800 ~ 23922696 (+) |
G69736 | NA | non-coding | upstream | 82670 | 23855075 ~ 23857571 (+) |
G69735 | NA | non-coding | upstream | 90727 | 23846645 ~ 23849514 (+) |
G69722 | NA | non-coding | upstream | 165970 | 23758384 ~ 23774271 (+) |
LOC117597085 | NA | non-coding | upstream | 172378 | 23654922 ~ 23767863 (+) |
G69946 | NA | non-coding | downstream | 64631 | 24007703 ~ 24009860 (+) |
G69966 | NA | non-coding | downstream | 140534 | 24083606 ~ 24084218 (+) |
G69987 | NA | non-coding | downstream | 195563 | 24138635 ~ 24138888 (+) |
G70129 | ccdc24 | non-coding | downstream | 623173 | 24566245 ~ 24566613 (+) |
G70130 | NA | non-coding | downstream | 623928 | 24567000 ~ 24567318 (+) |
G69509 | LOC108267411 | other | upstream | 619898 | 23318504 ~ 23320343 (+) |
LOC113540463 | NA | other | upstream | 1287794 | 22649810 ~ 22652447 (+) |
LOC113540377 | NA | other | upstream | 2177940 | 21752416 ~ 21762301 (+) |
mettl4 | mettl4 | other | upstream | 2300084 | 21629076 ~ 21640157 (+) |
plag1 | plag1,LOC107570635 | other | upstream | 2616274 | 21314218 ~ 21323967 (+) |
klhl18 | klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 | other | downstream | 85034 | 24028106 ~ 24106223 (+) |
G69971 | NA | other | downstream | 165723 | 24108795 ~ 24109889 (+) |
kif2c | kif2c | other | downstream | 915954 | 24859026 ~ 24871263 (+) |
tnr | tnr | other | downstream | 1764755 | 25707827 ~ 25881110 (+) |
LOC113539772 | kiaa0040 | other | downstream | 1953945 | 25897017 ~ 25902006 (+) |