ltb4r2b


Basic Information

Item Value
gene id ltb4r2b
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 26371921 ~ 26376408 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU84653
acagatatacagaaagagagagagagaaactaaaGACAGctaaagagagagaagatgacAATGTGAGACAGTATCATTCCTGAAACAGAGATTTAATCCTTGTGTTCCTATGAGGAAACTTCACTGCTCCACATCAGCATCTCTAATGACTGTGGAAAATATCACAAGCTCTTTCTCCCCTGACAAAACACCATCAGACCCCACAGTCTCATTTGCTATTGGCGCCTTCATCCTTGCCATTGTCTTCCTCCTGGGCGTCCCAGGAAACCTCTTCATCATATGGAGCATCCTGGTGCGTTCTCGTAAGCGCTCAGTCACCACGCTGATCATCCTGAACCTGGTGTGTGCCGATGGTGCCATCATGTGCCTCA
>XM_034303639.1
atgtgaatgtaattTTTAAGGGAATGTGAAAACACTATGAGTTCAGGTAGTTCATCTGCTGATGATTAAACACTCaataaaacaactaaaaataaaaagggatcaaaataaagagagaataaaattcCAATAAAAATGCCGTGACAATGGAGAAAGAGCATGGAGGACTGACTGActaatacctctctctctctctctctctcagcatgtTGTGGCCTGTGTGAtggaaatattttctctttatatAAGAACAAGAAGACAAACTGAAGACACACTGGAGGGAACAGattagagagacagaggaggagacatttaaacagacagatatacagaaagagagagagagaaactaaaGACAGctaaagagagagaagatgacAATGTGAGACAGTATCATTCCTGAAACAGAGATTTAATCCTTGTGTTCCTATGAGGAAACTTCACTGCTCCACATCAGCATCTCTAATGACTGTGGAAAATATCACAAGCTCTTTCTCCCCTGACAAAACACCATCAGACCCCACAGTCTCATTTGCTATTGGCGCCTTCATCCTTGCCATTGTCTTCCTCCTGGGCGTCCCAGGAAACCTCTTCATCATATGGAGCATCCTGGTGCGTTCTCGTAAGCGCTCAGTCACCACGCTGATCATCCTGAACCTGGTGTGTGCCGATGGTGCCATCATGTGCCTCACCGTGTTCTTCATTGTGTACCTGGCCAAGCAGTCGTGGGTGTTTGGACGCTCCATGTGCAAGCTGCTCTTCTACTTGTGCAACACCAACATGTATGCCTCCATCATGCTCATCACACTCATGAGTGTGCACCGGCTGGTCACCGTGCTCGACCGTGCTTACGTCTTCACGCGGAGGAGAAACATACTGAGCATCCTCGCCATGCTCTGGGTGCTCGTCTTTACGCTTGCCATCCCTGCTCTGATATTCAGGGATGAGAAAGAGGAGCACACCAATCAATTGCTGTGCTCATACAATCACACAAATCCCAAATATGAGGTGTTTCACCTGAGCATGGAGACAGTGGTGGGGTTCCTGCTCCCGTATGGAATCATCGTCAGCAGTTACGTGTGTATTCTCCGCGATCTGCAACAGACACGATTTAGGAGGCGAGTGCGTAGTGAGAAGCTCATCCTAGCCATCATTGTCACCTTCGCTGCCTTCTGGCTGCCATATCATATCATCAACATTGTGCAGGTGGTGTCTGCATGTGCACCAGAGCATTCTAAACtacaaaaaatGTTGGACAGCATCTCAAGCTCATGTCGAGCTGCCACCTCCTCCCTGGCCTTCATTAGCAGCTGTGCTAACCCGGTACTGTACGCTCTAGCAGGGCGCCCCTACATCCATGCAGACGGACTGTCCTTCATGGCCCGGCTGTTTGAGGGCACAGCGCTTGAGATCGGCAATGGAACACTCCGAATTCACCGCAAAGTGAGCAGAGCAGGACCGGCAGTGCTCTCACTGAAGAACTGCGACTCTTGTGCAAACAATGCAGACCAAAGCTAACAGACTGATATCTGAGTATTACACAAAGATGTCCTtta

Function

NR:

description
leukotriene B4 receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84653 False 371 TUCP 0.47 2 26373758 26376088
XM_034303639.1 True 1556 mRNA 0.47 6 26371921 26376408

Neighbor

gene id symbol gene type direction distance location
sdr39u1 sdr39u1 coding downstream 3946 26338735 ~ 26367975 (-)
parp2 parp2 coding downstream 42646 26319287 ~ 26329275 (-)
LOC117597050 LOC107716899,LOC107653439,LOC107548609 coding downstream 398916 25970634 ~ 25973005 (-)
tnn tnn coding downstream 439160 25904440 ~ 25932761 (-)
pappa2 pappa2,LOC107568983,LOC107722077 coding downstream 740721 25561334 ~ 25631200 (-)
si:dkeyp-66d1.7 LOC108267601,LOC103040076,LOC107706376,LOC107668989,LOC107738251,LOC107659403,LOC107557715,LOC107591450,LOC108413859 coding upstream 70050 26446458 ~ 26452831 (-)
sppl2 sppl2b coding upstream 202386 26578794 ~ 26595990 (-)
ccnl1b ccnl1 coding upstream 296339 26672747 ~ 26678848 (-)
slitrk3b LOC108267197 coding upstream 331674 26708082 ~ 26712304 (-)
copa copa coding upstream 394174 26770582 ~ 26786518 (-)
LOC117597203 NA non-coding downstream 82005 26260689 ~ 26289916 (-)
G71386 NA non-coding downstream 142730 26228879 ~ 26229191 (-)
G71376 NA non-coding downstream 160239 26211443 ~ 26211682 (-)
G71370 NA non-coding downstream 215070 26156163 ~ 26156851 (-)
G71363 NA non-coding downstream 241073 26130617 ~ 26130848 (-)
G71469 NA non-coding upstream 26131 26402539 ~ 26412348 (-)
G71470 NA non-coding upstream 31567 26407975 ~ 26415752 (-)
G71471 NA non-coding upstream 32767 26409175 ~ 26414494 (-)
G71474 NA non-coding upstream 49850 26426258 ~ 26427374 (-)
G71589 NA non-coding upstream 87622 26464030 ~ 26464318 (-)
ccdc24 ccdc24 other downstream 1785873 24565741 ~ 24586048 (-)
G70255 rnf220 other downstream 2066995 24304374 ~ 24304926 (-)
LOC117597117 NA other downstream 2839905 23531238 ~ 23532016 (-)
LOC113540013 NA other downstream 2854251 23516930 ~ 23517670 (-)
LOC113540114 LOC108267227 other downstream 2855562 23515699 ~ 23516359 (-)
G71596 NA other upstream 95672 26472080 ~ 26551030 (-)
G71832 NA other upstream 720194 27096602 ~ 27100858 (-)
G71909 LOC108267490 other upstream 827375 27203783 ~ 27204186 (-)
trnat-ugu_3 NA other upstream 1018949 27395357 ~ 27395429 (-)
trnat-ugu_4 NA other upstream 1019743 27396151 ~ 27396223 (-)

Expression


Co-expression Network