Gene
RNA
| Item | Value |
|---|---|
| gene id | G71764 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26894681 ~ 26895564 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU85065 | True | 324 | lncRNA | 0.48 | 2 | 26894681 | 26895564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nadkb | nadkb,LOC108267451,LOC107591341,LOC107738176,LOC108444346,LOC107659414,LOC107557499 | coding | downstream | 5345 | 26881468 ~ 26889336 (-) |
| samd7 | LOC108267443 | coding | downstream | 49663 | 26835646 ~ 26845018 (-) |
| LOC117597119 | NA | coding | downstream | 58793 | 26835025 ~ 26835888 (-) |
| LOC113540659 | LOC108267452 | coding | downstream | 84431 | 26808656 ~ 26810250 (-) |
| map1sb | LOC108267453 | coding | downstream | 89314 | 26792023 ~ 26805367 (-) |
| skila | LOC108267442 | coding | upstream | 8344 | 26903908 ~ 26913580 (-) |
| prkci | prkci,LOC107706387,LOC107668962,LOC107659412,LOC107738175,LOC107591345 | coding | upstream | 21595 | 26917159 ~ 26933519 (-) |
| LOC113540546 | NA | coding | upstream | 85625 | 26981189 ~ 26982209 (-) |
| tmem125b | LOC108267439 | coding | upstream | 209930 | 27105494 ~ 27108411 (-) |
| cfap57 | cfap57 | coding | upstream | 213248 | 27108812 ~ 27143851 (-) |
| G71734 | NA | non-coding | downstream | 35226 | 26847346 ~ 26859455 (-) |
| G71732 | LOC108267445,LOC107591334,LOC107684401 | non-coding | downstream | 38009 | 26853267 ~ 26856672 (-) |
| G71707 | NA | non-coding | downstream | 197584 | 26696893 ~ 26697097 (-) |
| G71705 | NA | non-coding | downstream | 198360 | 26694946 ~ 26696321 (-) |
| G71704 | NA | non-coding | downstream | 204287 | 26689070 ~ 26690394 (-) |
| G71765 | NA | non-coding | upstream | 39426 | 26934990 ~ 26935197 (-) |
| G71815 | NA | non-coding | upstream | 135753 | 27031317 ~ 27036462 (-) |
| G71854 | NA | non-coding | upstream | 247542 | 27143106 ~ 27151314 (-) |
| G71892 | NA | non-coding | upstream | 278488 | 27174052 ~ 27174536 (-) |
| G71896 | NA | non-coding | upstream | 284370 | 27179934 ~ 27180140 (-) |
| G71596 | NA | other | downstream | 343651 | 26472080 ~ 26551030 (-) |
| ltb4r2b | NA | other | downstream | 518273 | 26371921 ~ 26376408 (-) |
| ccdc24 | ccdc24 | other | downstream | 2308633 | 24565741 ~ 24586048 (-) |
| G70255 | rnf220 | other | downstream | 2589755 | 24304374 ~ 24304926 (-) |
| LOC117597117 | NA | other | downstream | 3362665 | 23531238 ~ 23532016 (-) |
| G71832 | NA | other | upstream | 201038 | 27096602 ~ 27100858 (-) |
| G71909 | LOC108267490 | other | upstream | 308219 | 27203783 ~ 27204186 (-) |
| trnat-ugu_3 | NA | other | upstream | 499793 | 27395357 ~ 27395429 (-) |
| trnat-ugu_4 | NA | other | upstream | 500587 | 27396151 ~ 27396223 (-) |
| LOC113540508 | LOC108268039 | other | upstream | 519703 | 27415267 ~ 27432678 (-) |
