G73492


Basic Information

Item Value
gene id G73492
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29846674 ~ 29846891 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU87081
ATACAGTGGacagaaatattgaaataaacatattactgctgagttttgacatttttattactgtaGTTTAAGAAcagacattttatacataagcagtttatttaaaaaaaaaccctgcatttCAGTTCCAAGATATAACACTCCAAAATGCGGAAAGATTCAAGGAGGATGGGGGGCTAATACTTATGtaatcacaggtttttttttatctttaatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko00830 Retinol metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU87081 True 218 lncRNA 0.30 1 29846674 29846891

Neighbor

gene id symbol gene type direction distance location
rgs5b LOC108267191 coding downstream 11483 29833662 ~ 29835191 (-)
nos1apb LOC108267139 coding downstream 21533 29813527 ~ 29825141 (-)
ddr2b LOC108267138 coding downstream 34117 29797070 ~ 29812557 (-)
xpr1b xpr1,LOC108267842,LOC107681714,LOC107593799,LOC107715512,LOC107722139,LOC105029208 coding downstream 52532 29766208 ~ 29794142 (-)
cdc14aa LOC108267888,LOC108411489 coding downstream 98561 29732265 ~ 29748113 (-)
brinp3b LOC108267163 coding upstream 21700 29868591 ~ 29899526 (-)
LOC113540096 coa1,LOC108267121,LOC107600219,LOC108428892,LOC103038044 coding upstream 56853 29903744 ~ 30014565 (-)
wdr48b wdr48,LOC108428893,LOC108268031,LOC103039099 coding upstream 178178 30025069 ~ 30037066 (-)
LOC113540054 NA coding upstream 190517 30037408 ~ 30043011 (-)
odf3l2a LOC108267126,LOC108428861,LOC103039917 coding upstream 203669 30050560 ~ 30056720 (-)
G73485 NA non-coding downstream 53030 29792212 ~ 29793644 (-)
G73481 NA non-coding downstream 66542 29778555 ~ 29780132 (-)
G73444 NA non-coding downstream 80559 29765747 ~ 29766115 (-)
G73448 NA non-coding downstream 81042 29765124 ~ 29765632 (-)
G73479 NA non-coding downstream 82883 29763505 ~ 29763791 (-)
G73607 NA non-coding upstream 82373 29929264 ~ 29929489 (-)
G73618 NA non-coding upstream 129780 29976671 ~ 30025036 (-)
G73652 NA non-coding upstream 248899 30095790 ~ 30097973 (-)
G73656 LOC108268010,LOC108428896,LOC107602621,LOC107678690,LOC107690048,LOC107721712,LOC107588875,LOC107749088 non-coding upstream 254549 30101440 ~ 30102870 (-)
LOC113540631 NA non-coding upstream 281837 30128728 ~ 30138872 (-)
zgc:110366 LOC108267892,LOC108437513 other downstream 115817 29724588 ~ 29730857 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other downstream 270947 29564221 ~ 29575727 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other downstream 674753 29148638 ~ 29171921 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other downstream 961709 28873578 ~ 28884965 (-)
LOC117597168 NA other downstream 1054845 28787614 ~ 28791829 (-)
G73619 blvra other upstream 172615 30019506 ~ 30022525 (-)
LOC113540055 LOC108268301 other upstream 894636 30741527 ~ 30750968 (-)
ccl20l LOC100304631 other upstream 926558 30773449 ~ 30775819 (-)
rem2 rem2,LOC108268350,LOC108442842,LOC107706340,LOC107567555,LOC107694663,LOC107583115,LOC107738122 other upstream 1400169 31247060 ~ 31277249 (-)
LOC117597010 NA other upstream 2023627 31870518 ~ 31871874 (-)

Expression


Co-expression Network