G73607


Basic Information

Item Value
gene id G73607
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29929264 ~ 29929489 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU87217
CCGAGATCCTCACTCTGCAGCCAGCCAAGAGGACTCACTCCAACACCTTCTCTTTTAGCCGTATTCCCACTTGATAGCTTTCACTTGTTATGACATCTCTCCAGGTGGCACGGGTCGAGACCACGTGACCACACAGACCCACGTAATCCCTGTTTGTCGACCTTTCTTCAAACTACACTGAAGTGGCAAGGGTACTTAGACAGATTGCAGCTTAAGAGGAAGGTGC

Function

GO:

id name namespace
GO:0034587 piRNA metabolic process biological_process

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU87217 True 226 lncRNA 0.50 1 29929264 29929489

Neighbor

gene id symbol gene type direction distance location
brinp3b LOC108267163 coding downstream 29738 29868591 ~ 29899526 (-)
rgs5b LOC108267191 coding downstream 94073 29833662 ~ 29835191 (-)
nos1apb LOC108267139 coding downstream 104123 29813527 ~ 29825141 (-)
ddr2b LOC108267138 coding downstream 116707 29797070 ~ 29812557 (-)
xpr1b xpr1,LOC108267842,LOC107681714,LOC107593799,LOC107715512,LOC107722139,LOC105029208 coding downstream 135122 29766208 ~ 29794142 (-)
wdr48b wdr48,LOC108428893,LOC108268031,LOC103039099 coding upstream 95580 30025069 ~ 30037066 (-)
LOC113540054 NA coding upstream 107919 30037408 ~ 30043011 (-)
odf3l2a LOC108267126,LOC108428861,LOC103039917 coding upstream 121071 30050560 ~ 30056720 (-)
crlf1a crlf1,crlf1a,LOC108428895,LOC107602622,LOC107678692,LOC107588877,LOC107690059 coding upstream 134561 30064050 ~ 30084861 (-)
acvr1l acvr1l,LOC108267867,LOC108428902,LOC107678695,LOC107602619,LOC107749086,LOC107588871 coding upstream 282900 30212389 ~ 30223320 (-)
G73492 NA non-coding downstream 82373 29846674 ~ 29846891 (-)
G73485 NA non-coding downstream 135620 29792212 ~ 29793644 (-)
G73481 NA non-coding downstream 149132 29778555 ~ 29780132 (-)
G73444 NA non-coding downstream 163149 29765747 ~ 29766115 (-)
G73448 NA non-coding downstream 163632 29765124 ~ 29765632 (-)
G73618 NA non-coding upstream 47182 29976671 ~ 30025036 (-)
G73652 NA non-coding upstream 166301 30095790 ~ 30097973 (-)
G73656 LOC108268010,LOC108428896,LOC107602621,LOC107678690,LOC107690048,LOC107721712,LOC107588875,LOC107749088 non-coding upstream 171951 30101440 ~ 30102870 (-)
LOC113540631 NA non-coding upstream 199239 30128728 ~ 30138872 (-)
G73670 NA non-coding upstream 257407 30186896 ~ 30191121 (-)
zgc:110366 LOC108267892,LOC108437513 other downstream 198407 29724588 ~ 29730857 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other downstream 353537 29564221 ~ 29575727 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other downstream 757343 29148638 ~ 29171921 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other downstream 1044299 28873578 ~ 28884965 (-)
LOC117597168 NA other downstream 1137435 28787614 ~ 28791829 (-)
G73619 blvra other upstream 90017 30019506 ~ 30022525 (-)
LOC113540055 LOC108268301 other upstream 812038 30741527 ~ 30750968 (-)
ccl20l LOC100304631 other upstream 843960 30773449 ~ 30775819 (-)
rem2 rem2,LOC108268350,LOC108442842,LOC107706340,LOC107567555,LOC107694663,LOC107583115,LOC107738122 other upstream 1317571 31247060 ~ 31277249 (-)
LOC117597010 NA other upstream 1941029 31870518 ~ 31871874 (-)

Expression


Co-expression Network