nol7


Basic Information

Item Value
gene id nol7
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 23376456 ~ 23382888 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935903.2
GTAGTTTGTTCGTCTTTAATATTTGTCGATTTCAATATGGCGAAATTTCAACGTGGGGATTTAGAGTCCAAATCTGAAAAAGAGTTAAGCGAGAAAATGTCTGATCAGAGCGATGATGAAGGACCGGAGGAAGTCACGTTTAACGACTCGAAAGCAGTCGCGCTAAAGAGCGTTAAAGACGCGCGGGATTCAGTGAAAAGGGGAAAAGAGTTGCTGAAGGAGAAGAGACGAAAAAGACAGTTGCTTTTCCAAGAACAAAAGAAAAGCAGACTTTTACCAGAAGCTCTTTTGGAAGAATTTGACACAGTGGCCACGAAAGCACCACCGCTGCCAGATGTGAAAGgtgagcagcagcaggagaagaagaaaaaagcgAAGAAGCCGAAGAAAGTGTCTAAAAGTTTGCAGGGCAACTGCAAGGTGATGCGATTGAAGGACCGGTCTGCCAATACCTCAATGCAGAAATCAGCCATGGATTTCATCCAAGCACGTCTGTATGGCCCAGGAAGCCAGAGAACAACCAACGCTGAACTTCTTTCTCTGCAAAAGAAACGCGGACTCAATCAAGGAGCTGCAGTGCAGTTTGCGAATAAGAAATGGGGAGCAGACCAGAAGGCCAAGGCAGAAAAGTGCAACAAGAGGTTTATTCACAGACAGAAGCTAATCGCCAGCTGAGACACTTCCGAGGATGTTTTATGTGCGACAGCATGATGAAGACTGCCTGCTCAGATTTCAGTCGTTGCAGCCAGTGCTGTTACACAGTGCTGTACAGACCAAAATGCAGTCACAGACACATGGCTGTGAAGAACTGTTGTATTGATTTGTGACTGGAAGCAGCTCATCATTAAGCATTGAATCCACAAACCTGGGAcagattgttttctttttttgattgTAAGCATTTTATGGAGTATTCTGAAAGTTAGACTttaaagaggggaaaaaaccctGAACAAActgcatataaatatttaaatttaacatgtgatcttcaataACATCCAAGATTTACTTTGTAATGGaattgagcttttttttttaagtttaaatggCTTTCATCAACATGGTCTATGttcagtttcctacattacccacaatgcttttTGACTACCTGATGATCGTGGTGTCAGTGGgaattagcccttgcttcatctctaagTAAAGAGTACGATGCAGCcaatgctttattattttaatctgtcCAGCTCTTTCATCTGTACAAACAGATCAGGTTCTAAAGTTTTAGTGTTCATGCTAGTACCGCCGTTTACACCATTGGGTTTATCTCGTAGATCTCTAACTAGCTGAGCAGAGTTGCTGCCGTAACTTGACACAACTGCATTGTAGAGCTGCACCACAGTCTTGGACCTTTAAGTCTGGTGTTTGTCATCTCCACTAGCTCTACTttagatttctcattaatatgacataaaTGGTGAGCGAGAAAAGAAACACTTGCTCTTTTGTTGTTGGGAGCTAAAAGCAAAATCTgaattatcacttatgtttggGAATTTTTTCTTCCGTTAACCTCCATTAAACCGCACTAGGAATGTCTGCTGTCGAATAACacaaatacagcaccaaccaacataTTAGCACCAAAATCACTGACCACATCCCAAACATTTCAATGTAAACACATTTAGTGTTTTgggacttttcctttaaggaacatatgaatatgcaaatggaAGGTCTTTACACTCTTTATAGCAAGTGCTGCTATAGAGATCAGGTCAAATGCTTTGTGTCTCTTGGGCTGAATGTAAATACTACTCTTAATTactgaatgtgagtgtgaaaaaataaacaacccCAAACTGCCCTGATGAA

Function

NR:

description
nucleolar protein 7

GO:

id name namespace
GO:0016072 rRNA metabolic process biological_process
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0034470 ncRNA processing biological_process
GO:0006364 rRNA processing biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0034660 ncRNA metabolic process biological_process

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935903.2 True 1836 mRNA 0.41 8 23376456 23382888

Neighbor

gene id symbol gene type direction distance location
and2 LOC108267411 coding downstream 53845 23318535 ~ 23322611 (-)
e2f5 LOC108268108,LOC108437220 coding downstream 84458 23285036 ~ 23291998 (-)
si:ch211-106h4.9 LOC108267629 coding downstream 113159 23230050 ~ 23263297 (-)
mrc1b LOC108268341 coding downstream 202077 23150126 ~ 23174379 (-)
clul1 clul1 coding downstream 326343 23041108 ~ 23050113 (-)
LOC113540008 NA coding upstream 26526 23409414 ~ 23418890 (-)
LOC117597115 NA coding upstream 47412 23430300 ~ 23442743 (-)
LOC113540011 NA coding upstream 63917 23446805 ~ 23463725 (-)
LOC113540113 LOC108267226 coding upstream 83529 23466417 ~ 23505181 (-)
LOC113540016 NA coding upstream 154540 23537428 ~ 23544732 (-)
G69503 NA non-coding downstream 97674 23278575 ~ 23278782 (-)
LOC117597081 NA non-coding downstream 102842 23272162 ~ 23273614 (-)
G69320 NA non-coding downstream 321073 23054514 ~ 23055383 (-)
G69254 NA non-coding downstream 567207 22808906 ~ 22809249 (-)
G69248 LOC108268132,LOC108440660,LOC107664077,LOC107746915 non-coding downstream 570548 22803386 ~ 22805908 (-)
G69551 NA non-coding upstream 13776 23396664 ~ 23397963 (-)
LOC113540115 NA non-coding upstream 70345 23453233 ~ 23454221 (-)
G69649 NA non-coding upstream 211443 23594331 ~ 23594544 (-)
G69691 NA non-coding upstream 268163 23651051 ~ 23651866 (-)
G69916 NA non-coding upstream 539218 23922106 ~ 23922538 (-)
retreg1 fam134b other downstream 29883 23331016 ~ 23346573 (-)
lrrcc1 lrrcc1 other downstream 69522 23292048 ~ 23306934 (-)
LOC113540019 LOC108268143 other downstream 740368 22629615 ~ 22636088 (-)
G68760 NA other downstream 1441287 21934526 ~ 21935169 (-)
LOC113539989 LOC108436138 other downstream 2005446 21354619 ~ 21371010 (-)
LOC117597073 LOC108267227,LOC108267226 other upstream 97077 23479965 ~ 23483850 (-)
G69592 LOC108267226,LOC108267227 other upstream 110491 23493379 ~ 23493919 (-)
LOC117597074 NA other upstream 112147 23495035 ~ 23495897 (-)
LOC117597075 LOC108267226,LOC108267227 other upstream 113069 23495957 ~ 23497021 (-)
LOC113540012 NA other upstream 130568 23513456 ~ 23514039 (-)

Expression


Co-expression Network