mettl4 (mettl4)


Basic Information

Item Value
gene id mettl4
gene name mettl4
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 21629076 ~ 21640157 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935991.2
CTCATCTATACCGGAAGTGGCGTAGTGTTTATGTACGGATCTTCAGCACGCGCGGTTTATGTGTTGCATGGTGGTAAAGCGCGACACCGGCAAACACTTctaaagttattttaatgtttaaacttTTATCAAATTGCGATCTAGAGTTTTTCAAATGTCTGTCCTGCTATCAGATGATCGCGGGTGGCTGTTGGACGCATGTTCTTTCATAAATGAAGGATTTCGGCGGTGCTACAGTGTAAACAAGGGCCACTTCAGGTGCTATTTCAAGAAGCAGTACTTTGATATACAGAAGCCTCATATAGTGAGTAAGTGCAGGAGTGATAGTATGATCAGTGCTGTAGCACACACAGAGAGCCATGTGGATGGGGATGCCAGAATGGAGTTAAAGACACGAAGGAAGAGGAAGCGTAAAAGAAGTGAGCTGAATCAGGGGGAGTTGGATGCTGAAGAATATCATAAAAAGGTCAGGTTGTTGGTTCTGGAGGGCACTCGGTCTCTACTGGAAAGTGGGCATCACTGTGGTTATCTGACAGAAGATTTACATACAGTGCCAACAAAACAAATGCCTGTTCATGAGTGCCAGCTGGCTGCACTATGTGACATGGCCAAGCAGCTGCTTAAAACGGAGAATTCTGAAGCCCCACACGTGCAGGCTGTTAATGGCCATGCAGACTCGGATGCACACCTTGATCTGTTCTCGTGCCTCACAGAAAATCCAGATGACTGTGCCCGTGAGGTAACGCTAATGGGGGAGACGTATTTCCTGCCTCCTCGCAGCCGTTTCCTGTTGTCTGACATCACATGTTTACAACCACTTATCCGCAATGGAGACAAATATGACCTAATAGTTCTTGATCCACCCTgggaaaataaatctgtgaaaagAAGCAGTAGGTACAGTTTTCTGCCATCTTCTCAGCTCAAAAAACTTCCTGTGCCATTGTTGAGTGCAGCAGGATGTGTGGTGGTTACTTGGGTAACCAACCGTCCTCGCCATCTCCGGTTCGTCAAAGAGGAACTTTATCCTCACTGGGGAGTGAAGCTACTTGCAGAGTGGCTCTGGGTGAAGgtGACCCGGAAAGGGGAGGTAGTTTTCCCCCTGGATTCGCCACACAAGAAACCTTACGAAGTGTTATTACTTGGAAGGTTCTGTGCTAGCAGTGACAGCACAACTAGATCTGAAGTGTGTGAGATCCCAGATCAACGGCTCATAATTAGCATTCCCTCAGCACTGCACTCTCAGAAGCCAGCTCTCTCAGctgtgctgAAGCCATACATTAGGCCTAAAGCTAAGTGTCTGGAAATGTTTGCTCGAAGTCTCCAGCCTGATTGGACAAGCTGGGGGAATGAGGTTATCAAATTCCAGCACCACAGCTATTTTACCGTAGAGAGTGTGGAATGTGCACATGACACATTTACTGAGATGACCGATGCAGATCAACAGGTAGACACTAGAGTAACGGACAAATCTGCCTGTCTGTGAACCTAAGAACAATTTTAGAAATATAAActtcttaatatttatttttattactggaAAACAGCATTGATATTAAACAGGTTTTGTACAATA
>XR_004577949.1
GCTCATCTATACCGGAAGTGGCGTAGTGTTTATGTACGGATCTTCAGCACGCGCGGTTTATGTGTTGCATGGTGGTAAAGCGCGACACCGGCAAACACTTctaaagttattttaatgtttaaacttTTATCAAATTGCGATCTAGAGTTTTTCAAATGTCTGTCCTGCTATCAGATGATCGCGGGTGGCTGTTGGACGCATGTTCTTTCATAAATGAAGGATTTCGGCGGTGCTACAGTGTAAACAAGGGCCACTTCAGGTGCTATTTCAAGAAGCAGTACTTTGATATACAGAAGCCTCATATAGTGAGTAAGTGCAGGAGTGATAGTATGATCAGTGCTGTAGCACACACAGAGAGCCATGTGGATGGGGATGCCAGAATGGAGTTAAAGACACGAAGGAAGAGGAAGCGTAAAAGAAGTGAGCTGAATCAGGGGGAGTTGGATGCTGAAGAATATCATAAAAAGGTCAGGTTGTTGGTTCTGGAGGGCACTCGGTCTCTACTGGAAAGTGGGCATCACTGTGGTTATCTGACAGAAGATTTACATACAGTGCCAACAAAACAAATGCCTGTTCATGAGTGCCAGCTGGCTGCACTATGTGACATGGCCAAGCAGCTGCTTAAAACGGAGAATTCTGAAGCCCCACACGTGCAGGCTGTTAATGGCCATGCAGACTCGGATGCACACCTTGATCTGTTCTCGTGCCTCACAGAAAATCCAGATGACTGTGCCCGTGAGGTAACGCTAATGGGGGAGACGTATTTCCTGCCTCCTCGCAGCCGTTTCCTGTTGTCTGACATCACATGTTTACAACCACTTATCCGCAATGGAGACAAATATGACCTAATAGTTCTTGATCCACCCTgggaaaataaatctgtgaaaagAAGCAGTAGGTACAGTTTTCTGCCATCTTCTCAGCTCAAAAAACTTCCTGTGCCATTGTTGAGTGCAGCAGGATGTGTGGTGGTTACTTGGGTAACCAACCGTCCTCGCCATCTCCGGTTCGTCAAAGAGGAACTTTATCCTCACTGGGGAGTGAAGCTACTTGCAGAGTGGCTCTGGGTGAAGgtGACCCGGAAAGGGGAGGTAGTTTTCCCCCTGGATTCGCCACACAAGAAACCTTACGAAGTGTTATTACTTGGAAGGTTCTGTGCTAGCAGTGACAGCACAACTAGAGCAGCTGAGATGTGTAACTAGACACAAGGTGGTATATTTCCTTTActacttctaaaaaaaaatacattttgctgatttttgaCTGGTTGGTTGTAACAAACTGCGAATCTCTTTGTGGTTTATTCAATACGCTGCCTGGTCACATTACTGTCTAAAAGTTTGTACGGATGATGATAATTACCTGCAGCCTGGTAATTTCTATACAGCAGCAAATTACACTTGGCAAGTTTTATTCACAAATATGGGCACCCCAAAAGCATGGTCTTTGTATATGTGTTTTAAGTTATACCAAATTGTTCACACACTATCCCGTTTGTTTCAGATCTGAAGTGTGTGAGATCCCAGATCAACGGCTCATAATTAGCATTCCCTCAGCACTGCACTCTCAGAAGCCAGCTCTCTCAGctgtgctgAAGCCATACATTAGGCCTAAAGCTAAGTGTCTGGAAATG
>XR_004577950.1
GCTCATCTATACCGGAAGTGGCGTAGTGTTTATGTACGGATCTTCAGCACGCGCGGTTTATGTGTTGCATGGTGGTAAAGCGCGACACCGGCAAACACTTctaaagttattttaatgtttaaacttTTATCAAATTGCGATCTAGAGTTTTTCAAATGTCTGTCCTGCTATCAGATGATCGCGGGTGGCTGTTGGACGCATGTTCTTTCATAAATGAAGGATTTCGGCGGTGCTACAGTGTAAACAAGGGCCACTTCAGGTGCTATTTCAAGAAGCAGTACTTTGATATACAGAAGCCTCATATAGTGAGTAAGTGCAGGAGTGATAGTATGATCAGTGCTGTAGCACACACAGAGAGCCATGTGGATGGGGATGCCAGAATGGAGTTAAAGACACGAAGGAAGAGGAAGCGTAAAAGAAGTGAGCTGAATCAGGGGGAGTTGGATGCTGAAGAATATCATAAAAAGGTCAGGTTGTTGGTTCTGGAGGGCACTCGGTCTCTACTGGAAAGTGGGCATCACTGTGGTTATCTGACAGAAGATTTACATACAGTGCCAACAAAACAAATGCCTGTTCATGAGTGCCAGCTGGCTGCACTATGTGACATGGCCAAGCAGCTGCTTAAAACGGAGAATTCTGAAGCCCCACACGTGCAGGCTGTTAATGGCCATGCAGACTCGGATGCACACCTTGATCTGTTCTCGTGCCTCACAGAAAATCCAGATGACTGTGCCCGTGAGGTAACGCTAATGGGGGAGACGTATTTCCTGCCTCCTCGCAGCCGTTTCCTGTTGTCTGACATCACATGTTTACAACCACTTATCCGCAATGGAGACAAATATGACCTAATAGTTCTTGATCCACCCTgggaaaataaatctgtgaaaagAAGCAGTAGGTACAGTTTTCTGCCATCTTCTCAGCTCAAAAAACTTCCTGTGCCATTGTTGAGTGCAGCAGGATGTGTGGTGGTTACTTGGGTAACCAACCGTCCTCGCCATCTCCGGTTCGTCAAAGAGGAACTTTATCCTCACTGGGGAGTGAAGCTACTTGCAGAGTGGCTCTGGGTGAAGgtGACCCGGAAAGGGGAGGTAGTTTTCCCCCTGGATTCGCCACACAAGAAACCTTACGAAGTGTTATTACTTGGAAGGTTCTGTGCTAGCAGTGACAGCACAACTAGAGCAGCTGAGATGTGTAACTAGACACAAGTTTGTACGGATGATGATAATTACCTGCAGCCTGGTAATTTCTATACAGCAGCAAATTACACTTGGCAAGTTTTATTCACAAATATGGGCACCCCAAAAGCATGGTCTTTGTATATGTGTTTTAAGTTATACCAAATTGTTCACACACTATCCCGTTTGTTTCAGATCTGAAGTGTGTGAGATCCCAGATCAACGGCTCATAATTAGCATTCCCTCAGCACTGCACTCTCAGAAGCCAGCTCTCTCAGctgtgctgAAGCCATACATTAGGCCTAAAGCTAAGTGTCTGGAAATG

Function

symbol description
mettl4 Predicted to enable methyltransferase activity and nucleic acid binding activity. Predicted to act upstream of or within methylation. Orthologous to human METTL4 (methyltransferase 4, N6-adenosine).

NR:

description
methyltransferase-like protein 4 isoform X2

GO: NA

KEGG:

id description
K24174 METTL4; N(6)-adenine-specific DNA methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935991.2 False 1576 mRNA 0.45 8 21629077 21640157
XR_004577949.1 True 1633 misc_RNA 0.45 8 21629076 21639890
XR_004577950.1 False 1503 misc_RNA 0.46 9 21629076 21639890

Neighbor

gene id symbol gene type direction distance location
LOC113540483 lpin2,LOC106916092,LOC103149806,LOC106945104,LOC108230461 coding upstream 77266 21536003 ~ 21551810 (+)
myom1b myom1,LOC108267511,LOC106590144 coding upstream 93443 21496953 ~ 21535633 (+)
chmp5b chmp5,chmp5b,LOC108436133,LOC102227507 coding upstream 148596 21475271 ~ 21480480 (+)
LOC113540433 oprk1,LOC108267332,LOC103039256,LOC108436134,LOC105007147,LOC107664042,LOC107732559,LOC107586336,LOC107558938 coding upstream 163253 21459111 ~ 21465823 (+)
lypla1 lypla1,lypa1 coding upstream 204998 21420585 ~ 21424078 (+)
enosf1 enosf1 coding downstream 101032 21741189 ~ 21748713 (+)
LOC113540212 colec12 coding downstream 126895 21767052 ~ 21776821 (+)
LOC113539992 tmem236 coding downstream 147033 21787190 ~ 21793201 (+)
mrc1a mrc1 coding downstream 167567 21807724 ~ 21828839 (+)
LOC113540130 slc39a12 coding downstream 188867 21829024 ~ 21843884 (+)
G68523 NA non-coding upstream 141588 21486974 ~ 21487488 (+)
G68435 NA non-coding upstream 312561 21316255 ~ 21316515 (+)
G68313 NA non-coding upstream 394818 21234025 ~ 21234258 (+)
G68304 NA non-coding upstream 419752 21205745 ~ 21209324 (+)
G68299 NA non-coding upstream 439942 21188531 ~ 21189134 (+)
G68621 NA non-coding downstream 92789 21732946 ~ 21749319 (+)
G68687 NA non-coding downstream 274649 21914806 ~ 21917776 (+)
G68947 NA non-coding downstream 604431 22244588 ~ 22244825 (+)
G68955 NA non-coding downstream 742937 22383094 ~ 22387745 (+)
G68954 scrib non-coding downstream 752682 22392839 ~ 22397101 (+)
plag1 plag1,LOC107570635 other upstream 305109 21314218 ~ 21323967 (+)
G68232 LOC108267516 other upstream 595323 21020258 ~ 21033753 (+)
fcer1g LOC100305060 other upstream 1474299 20147795 ~ 20154777 (+)
dock11 dock11,LOC107683516 other upstream 1561856 19990684 ~ 20067220 (+)
G66864 NA other upstream 2770424 18856456 ~ 18858652 (+)
LOC113540377 NA other downstream 112259 21752416 ~ 21762301 (+)
LOC113540463 NA other downstream 1009653 22649810 ~ 22652447 (+)
G69509 LOC108267411 other downstream 1678347 23318504 ~ 23320343 (+)
klhl18 klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 other downstream 2387949 24028106 ~ 24106223 (+)
G69971 NA other downstream 2468638 24108795 ~ 24109889 (+)

Expression


Co-expression Network